RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 SYT16Q17RD7 645 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 MINDY4Q4G0A6 757 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 ATG9BQ674R7 924 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 NDUFAF7Q7L592 441 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 LAPTM4BQ86VI4 370 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 ZC3H7AQ8IWR0 971 aaKnown RBP16.71■□□□□ 0.27
HDAC4-211ENST00000494800 SNX31Q8N9S9 440 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 ZNF740Q8NDX6 193 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 SEC16BQ96JE7 1060 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 LHPPQ9H008 270 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 SNX15Q9NRS6 342 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 HCN3Q9P1Z3 774 aa16.71■□□□□ 0.27
HDAC4-211ENST00000494800 C19orf25Q9UFG5 118 aaPredicted RBP16.71■□□□□ 0.27
HDAC4-211ENST00000494800 SPTA1P02549 2419 aa16.7■□□□□ 0.26
HDAC4-211ENST00000494800 HEATR5BQ9P2D3 2071 aa16.7■□□□□ 0.26
HDAC4-211ENST00000494800 A0A087WUV0 522 aaPredicted RBP16.7■□□□□ 0.26
HDAC4-211ENST00000494800 TTLL8A6PVC2 850 aa16.7■□□□□ 0.26
HDAC4-211ENST00000494800 CCNT2O60583 730 aaKnown RBP16.7■□□□□ 0.26
HDAC4-211ENST00000494800 RDH16O75452 317 aa16.7■□□□□ 0.26
HDAC4-211ENST00000494800 C8orf89P0DMQ9 161 aa16.7■□□□□ 0.26
HDAC4-211ENST00000494800 HSPA7P48741 367 aa16.7■□□□□ 0.26
HDAC4-211ENST00000494800 SERPINB9P50453 376 aa16.7■□□□□ 0.26
HDAC4-211ENST00000494800 STXBP1P61764 594 aaKnown RBP16.7■□□□□ 0.26
HDAC4-211ENST00000494800 KCNC4Q03721 635 aa16.7■□□□□ 0.26
HDAC4-211ENST00000494800 C18orf21Q32NC0 220 aaPredicted RBP16.7■□□□□ 0.26
HDAC4-211ENST00000494800 PAGE2BQ5JRK9 111 aa16.7■□□□□ 0.26
HDAC4-211ENST00000494800 AGAP7PQ5VUJ5 663 aa16.7■□□□□ 0.26
HDAC4-211ENST00000494800 TMIGD1Q6UXZ0 262 aa16.7■□□□□ 0.26
HDAC4-211ENST00000494800 SLCO4C1Q6ZQN7 724 aa16.7■□□□□ 0.26
HDAC4-211ENST00000494800 PRSS41Q7RTY9 318 aa16.7■□□□□ 0.26
HDAC4-211ENST00000494800 LRRC70Q7Z2Q7 622 aa16.7■□□□□ 0.26
HDAC4-211ENST00000494800 TMEM151BQ8IW70 566 aa16.7■□□□□ 0.26
HDAC4-211ENST00000494800 PARP9Q8IXQ6 854 aa16.7■□□□□ 0.26
HDAC4-211ENST00000494800 KBTBD2Q8IY47 623 aa16.7■□□□□ 0.26
HDAC4-211ENST00000494800 AGAP4Q96P64 663 aa16.7■□□□□ 0.26
HDAC4-211ENST00000494800 TMEM79Q9BSE2 394 aa16.7■□□□□ 0.26
HDAC4-211ENST00000494800 FUT8Q9BYC5 575 aa16.7■□□□□ 0.26
HDAC4-211ENST00000494800 EHD1Q9H4M9 534 aa16.7■□□□□ 0.26
HDAC4-211ENST00000494800 ZNF160Q9HCG1 818 aa16.7■□□□□ 0.26
HDAC4-211ENST00000494800 PRM3Q9NNZ6 103 aa16.7■□□□□ 0.26
HDAC4-211ENST00000494800 SLAMF7Q9NQ25 335 aa16.7■□□□□ 0.26
HDAC4-211ENST00000494800 RIC8BQ9NVN3 520 aa16.7■□□□□ 0.26
HDAC4-211ENST00000494800 PTBP2Q9UKA9 531 aaKnown RBP16.7■□□□□ 0.26
HDAC4-211ENST00000494800 A0A096LPK6 155 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 TAPBPO15533 448 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 GALR3O60755 368 aaPredicted RBP16.69■□□□□ 0.26
HDAC4-211ENST00000494800 ALOX12BO75342 701 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 KRT38O76015 456 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 C2P06681 752 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 UQCRHP07919 91 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 SERPINA6P08185 405 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 ICAM2P13598 275 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 CNTFP26441 200 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 VARSP26640 1264 aaKnown RBP16.69■□□□□ 0.26
HDAC4-211ENST00000494800 MSH2P43246 934 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 LAPTM5Q13571 262 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 SLBPQ14493 270 aaKnown RBP eCLIP16.69■□□□□ 0.26
HDAC4-211ENST00000494800 ACAP2Q15057 778 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 HIST2H2ACQ16777 129 aaPredicted RBP16.69■□□□□ 0.26
HDAC4-211ENST00000494800 DEFB134Q4QY38 66 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 XKR6Q5GH73 641 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 HIST2H2AA3Q6FI13 130 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 FAAH2Q6GMR7 532 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 ISCA2Q86U28 154 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 ZADH2Q8N4Q0 377 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 AFAP1L2Q8N4X5 818 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 RHEBL1Q8TAI7 183 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 SLC44A1Q8WWI5 657 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 C8orf44Q96CB5 159 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 MOCOSQ96EN8 888 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 PTCD3Q96EY7 689 aaKnown RBP16.69■□□□□ 0.26
HDAC4-211ENST00000494800 THOC3Q96J01 351 aaKnown RBP16.69■□□□□ 0.26
HDAC4-211ENST00000494800 OR1F2PQ96R84 312 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 EFCAB11Q9BUY7 163 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 CD244Q9BZW8 370 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 SPNS1Q9H2V7 528 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 ZNF552Q9H707 407 aaPredicted RBP16.69■□□□□ 0.26
HDAC4-211ENST00000494800 CLK4Q9HAZ1 481 aaKnown RBP16.69■□□□□ 0.26
HDAC4-211ENST00000494800 IGSF5Q9NSI5 407 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 NFU1Q9UMS0 254 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 BSNQ9UPA5 3926 aa16.69■□□□□ 0.26
HDAC4-211ENST00000494800 A0A088AWK7 358 aa16.68■□□□□ 0.26
HDAC4-211ENST00000494800 ANKDD1BA6NHY2 528 aa16.68■□□□□ 0.26
HDAC4-211ENST00000494800 ZNF888P0CJ79 500 aaPredicted RBP16.68■□□□□ 0.26
HDAC4-211ENST00000494800 ZNF10P21506 573 aaPredicted RBP16.68■□□□□ 0.26
HDAC4-211ENST00000494800 JAK1P23458 1154 aa16.68■□□□□ 0.26
HDAC4-211ENST00000494800 ECHS1P30084 290 aa16.68■□□□□ 0.26
HDAC4-211ENST00000494800 AGTR2P50052 363 aa16.68■□□□□ 0.26
HDAC4-211ENST00000494800 EEF1A2Q05639 463 aaKnown RBP16.68■□□□□ 0.26
HDAC4-211ENST00000494800 NADK2Q4G0N4 442 aa16.68■□□□□ 0.26
HDAC4-211ENST00000494800 LGSNQ5TDP6 509 aa16.68■□□□□ 0.26
HDAC4-211ENST00000494800 JMJD6Q6NYC1 403 aaPredicted RBP16.68■□□□□ 0.26
HDAC4-211ENST00000494800 IGFL3Q6UXB1 125 aa16.68■□□□□ 0.26
HDAC4-211ENST00000494800 PDSS2Q86YH6 399 aa16.68■□□□□ 0.26
HDAC4-211ENST00000494800 EFCAB3Q8N7B9 438 aa16.68■□□□□ 0.26
HDAC4-211ENST00000494800 ANKRD53Q8N9V6 530 aa16.68■□□□□ 0.26
HDAC4-211ENST00000494800 KCTD4Q8WVF5 259 aa16.68■□□□□ 0.26
HDAC4-211ENST00000494800 CCT6BQ92526 530 aa16.68■□□□□ 0.26
HDAC4-211ENST00000494800 PNPLA2Q96AD5 504 aa16.68■□□□□ 0.26
HDAC4-211ENST00000494800 NXNL1Q96CM4 212 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms