RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 KLHL18O94889 574 aa21.42■■□□□ 1.02
SNIP1-203ENST00000493916 HPP00738 406 aa21.42■■□□□ 1.02
SNIP1-203ENST00000493916 ALPPP05187 535 aa21.42■■□□□ 1.02
SNIP1-203ENST00000493916 C2P06681 752 aa21.42■■□□□ 1.02
SNIP1-203ENST00000493916 HEXBP07686 556 aa21.42■■□□□ 1.02
SNIP1-203ENST00000493916 CXCR2P25025 360 aa21.42■■□□□ 1.02
SNIP1-203ENST00000493916 VARSP26640 1264 aaKnown RBP21.42■■□□□ 1.02
SNIP1-203ENST00000493916 KCNC1P48547 511 aa21.42■■□□□ 1.02
SNIP1-203ENST00000493916 HSPA7P48741 367 aa21.42■■□□□ 1.02
SNIP1-203ENST00000493916 SERPINB8P50452 374 aa21.42■■□□□ 1.02
SNIP1-203ENST00000493916 TLE1Q04724 770 aa21.42■■□□□ 1.02
SNIP1-203ENST00000493916 RAPSNQ13702 412 aa21.42■■□□□ 1.02
SNIP1-203ENST00000493916 NIPAL1Q6NVV3 410 aa21.42■■□□□ 1.02
SNIP1-203ENST00000493916 IFT20Q8IY31 132 aa21.42■■□□□ 1.02
SNIP1-203ENST00000493916 OR51Q1Q8NH59 317 aa21.42■■□□□ 1.02
SNIP1-203ENST00000493916 MESP1Q9BRJ9 268 aa21.42■■□□□ 1.02
SNIP1-203ENST00000493916 SLC6A16Q9GZN6 736 aa21.42■■□□□ 1.02
SNIP1-203ENST00000493916 PITHD1Q9GZP4 211 aaPredicted RBP21.42■■□□□ 1.02
SNIP1-203ENST00000493916 EHD1Q9H4M9 534 aa21.42■■□□□ 1.02
SNIP1-203ENST00000493916 HCN3Q9P1Z3 774 aa21.42■■□□□ 1.02
SNIP1-203ENST00000493916 NAALAD2Q9Y3Q0 740 aa21.42■■□□□ 1.02
SNIP1-203ENST00000493916 UBR5O95071 2799 aaPredicted RBP21.42■■□□□ 1.02
SNIP1-203ENST00000493916 ALDOAP04075 364 aaKnown RBP21.41■■□□□ 1.02
SNIP1-203ENST00000493916 GSTM2P28161 218 aa21.41■■□□□ 1.02
SNIP1-203ENST00000493916 SKP1P63208 163 aa21.41■■□□□ 1.02
SNIP1-203ENST00000493916 FAM83EQ2M2I3 478 aa21.41■■□□□ 1.02
SNIP1-203ENST00000493916 ABHD13Q7L211 337 aa21.41■■□□□ 1.02
SNIP1-203ENST00000493916 LRRC70Q7Z2Q7 622 aa21.41■■□□□ 1.02
SNIP1-203ENST00000493916 RHEBL1Q8TAI7 183 aa21.41■■□□□ 1.02
SNIP1-203ENST00000493916 UBTD2Q8WUN7 234 aa21.41■■□□□ 1.02
SNIP1-203ENST00000493916 EXT2Q93063 718 aa21.41■■□□□ 1.02
SNIP1-203ENST00000493916 ISL2Q96A47 359 aa21.41■■□□□ 1.02
SNIP1-203ENST00000493916 NXNL1Q96CM4 212 aa21.41■■□□□ 1.02
SNIP1-203ENST00000493916 SEC16BQ96JE7 1060 aa21.41■■□□□ 1.02
SNIP1-203ENST00000493916 PAFAH2Q99487 392 aa21.41■■□□□ 1.02
SNIP1-203ENST00000493916 TRIM4Q9C037 500 aa21.41■■□□□ 1.02
SNIP1-203ENST00000493916 ZNF552Q9H707 407 aaPredicted RBP21.41■■□□□ 1.02
SNIP1-203ENST00000493916 NT5DC2Q9H857 520 aa21.41■■□□□ 1.02
SNIP1-203ENST00000493916 NFU1Q9UMS0 254 aa21.41■■□□□ 1.02
SNIP1-203ENST00000493916 TNRC6AQ8NDV7 1962 aaKnown RBP21.41■■□□□ 1.02
SNIP1-203ENST00000493916 LOC102723996A0A087X1L8 192 aa21.4■■□□□ 1.02
SNIP1-203ENST00000493916 A0A096LPK6 155 aa21.4■■□□□ 1.02
SNIP1-203ENST00000493916 GALR3O60755 368 aaPredicted RBP21.4■■□□□ 1.02
SNIP1-203ENST00000493916 ALOX12BO75342 701 aa21.4■■□□□ 1.02
SNIP1-203ENST00000493916 H2AFYO75367 372 aaKnown RBP21.4■■□□□ 1.02
SNIP1-203ENST00000493916 RDH16O75452 317 aa21.4■■□□□ 1.02
SNIP1-203ENST00000493916 SERPIND1P05546 499 aa21.4■■□□□ 1.02
SNIP1-203ENST00000493916 INHBAP08476 426 aa21.4■■□□□ 1.02
SNIP1-203ENST00000493916 COX6A1P12074 109 aa21.4■■□□□ 1.02
SNIP1-203ENST00000493916 ALOX12P18054 663 aa21.4■■□□□ 1.02
SNIP1-203ENST00000493916 IL10P22301 178 aa21.4■■□□□ 1.02
SNIP1-203ENST00000493916 ITGA3P26006 1051 aa21.4■■□□□ 1.02
SNIP1-203ENST00000493916 XCR1P46094 333 aa21.4■■□□□ 1.02
SNIP1-203ENST00000493916 SERPINB9P50453 376 aa21.4■■□□□ 1.02
SNIP1-203ENST00000493916 IRF9Q00978 393 aa21.4■■□□□ 1.02
SNIP1-203ENST00000493916 HYAL2Q12891 473 aa21.4■■□□□ 1.02
SNIP1-203ENST00000493916 SLBPQ14493 270 aaKnown RBP eCLIP21.4■■□□□ 1.02
SNIP1-203ENST00000493916 RBBP5Q15291 538 aaKnown RBP21.4■■□□□ 1.02
SNIP1-203ENST00000493916 PDK4Q16654 411 aa21.4■■□□□ 1.02
SNIP1-203ENST00000493916 TMEM205Q6UW68 189 aa21.4■■□□□ 1.02
SNIP1-203ENST00000493916 TAOK1Q7L7X3 1001 aa21.4■■□□□ 1.02
SNIP1-203ENST00000493916 KRT78Q8N1N4 520 aa21.4■■□□□ 1.02
SNIP1-203ENST00000493916 TTLQ8NG68 377 aa21.4■■□□□ 1.02
SNIP1-203ENST00000493916 CREB3L4Q8TEY5 395 aa21.4■■□□□ 1.02
SNIP1-203ENST00000493916 KCTD4Q8WVF5 259 aa21.4■■□□□ 1.02
SNIP1-203ENST00000493916 C8orf44Q96CB5 159 aa21.4■■□□□ 1.02
SNIP1-203ENST00000493916 WDR34Q96EX3 536 aa21.4■■□□□ 1.02
SNIP1-203ENST00000493916 CD244Q9BZW8 370 aa21.4■■□□□ 1.02
SNIP1-203ENST00000493916 MKL2Q9ULH7 1088 aa21.4■■□□□ 1.02
SNIP1-203ENST00000493916 A0A087WUV0 522 aaPredicted RBP21.39■■□□□ 1.01
SNIP1-203ENST00000493916 URADA6NGE7 173 aa21.39■■□□□ 1.01
SNIP1-203ENST00000493916 SYCE1LA8MT33 242 aa21.39■■□□□ 1.01
SNIP1-203ENST00000493916 SUPT3HB4E1H0 165 aa21.39■■□□□ 1.01
SNIP1-203ENST00000493916 UBXN8O00124 270 aa21.39■■□□□ 1.01
SNIP1-203ENST00000493916 CLGNO14967 610 aa21.39■■□□□ 1.01
SNIP1-203ENST00000493916 SUPT3HO75486 399 aa21.39■■□□□ 1.01
SNIP1-203ENST00000493916 KLHL2O95198 593 aa21.39■■□□□ 1.01
SNIP1-203ENST00000493916 SERPINA6P08185 405 aa21.39■■□□□ 1.01
SNIP1-203ENST00000493916 ZNF888P0CJ79 500 aaPredicted RBP21.39■■□□□ 1.01
SNIP1-203ENST00000493916 TYK2P29597 1187 aa21.39■■□□□ 1.01
SNIP1-203ENST00000493916 MAGEA12P43365 314 aa21.39■■□□□ 1.01
SNIP1-203ENST00000493916 EFNA3P52797 238 aa21.39■■□□□ 1.01
SNIP1-203ENST00000493916 ACAP2Q15057 778 aa21.39■■□□□ 1.01
SNIP1-203ENST00000493916 FBXO48Q5FWF7 155 aa21.39■■□□□ 1.01
SNIP1-203ENST00000493916 IGFL3Q6UXB1 125 aa21.39■■□□□ 1.01
SNIP1-203ENST00000493916 TMIGD1Q6UXZ0 262 aa21.39■■□□□ 1.01
SNIP1-203ENST00000493916 NDUFAF7Q7L592 441 aa21.39■■□□□ 1.01
SNIP1-203ENST00000493916 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.39■■□□□ 1.01
SNIP1-203ENST00000493916 SNX31Q8N9S9 440 aa21.39■■□□□ 1.01
SNIP1-203ENST00000493916 UTP15Q8TED0 518 aaKnown RBP21.39■■□□□ 1.01
SNIP1-203ENST00000493916 ESAMQ96AP7 390 aa21.39■■□□□ 1.01
SNIP1-203ENST00000493916 OR1F2PQ96R84 312 aa21.39■■□□□ 1.01
SNIP1-203ENST00000493916 VN1R1Q9GZP7 353 aa21.39■■□□□ 1.01
SNIP1-203ENST00000493916 LHPPQ9H008 270 aa21.39■■□□□ 1.01
SNIP1-203ENST00000493916 ZNF180Q9UJW8 692 aa21.39■■□□□ 1.01
SNIP1-203ENST00000493916 IKBKGQ9Y6K9 419 aa21.39■■□□□ 1.01
SNIP1-203ENST00000493916 IGHV1-45A0A0A0MS14 117 aa21.38■■□□□ 1.01
SNIP1-203ENST00000493916 NSG1A0A0A6YYJ2 146 aa21.38■■□□□ 1.01
SNIP1-203ENST00000493916 CCNT2O60583 730 aaKnown RBP21.38■■□□□ 1.01
SNIP1-203ENST00000493916 JRKO75564 520 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms