RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 MC2RQ01718 297 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 CYP4F3Q08477 520 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 TUBB3Q13509 450 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 CUL3Q13618 768 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 GRM7Q14831 915 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 FAM214AQ32MH5 1076 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 BLOC1S3Q6QNY0 202 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 TRIM46Q7Z4K8 759 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 B3GNT8Q7Z7M8 397 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 PLD3Q8IV08 490 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.87□□□□□ -0.51
SNX17-208ENST00000493711 LRRC34Q8IZ02 419 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 CSNK1A1LQ8N752 337 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 ZNF781Q8N8C0 355 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 ANKRD53Q8N9V6 530 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 TTC29Q8NA56 475 aaPredicted RBP11.87□□□□□ -0.51
SNX17-208ENST00000493711 HUS1BQ8NHY5 278 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 WDR36Q8NI36 951 aaKnown RBP11.87□□□□□ -0.51
SNX17-208ENST00000493711 ZNF473Q8WTR7 871 aaKnown RBP11.87□□□□□ -0.51
SNX17-208ENST00000493711 TWIST2Q8WVJ9 160 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 CHMP6Q96FZ7 201 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 TEFMQ96QE5 360 aaKnown RBP11.87□□□□□ -0.51
SNX17-208ENST00000493711 ASPSCR1Q9BZE9 553 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 ROGDIQ9GZN7 287 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 C20orf27Q9GZN8 174 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 NSRP1Q9H0G5 558 aaKnown RBP11.87□□□□□ -0.51
SNX17-208ENST00000493711 SPNS1Q9H2V7 528 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 FAM60AQ9NP50 221 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 DMRT3Q9NQL9 472 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 SIDT1Q9NXL6 827 aaKnown RBP11.87□□□□□ -0.51
SNX17-208ENST00000493711 AHSPQ9NZD4 102 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 RARRES3Q9UL19 164 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 SRPK3Q9UPE1 567 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 TIMM22Q9Y584 194 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 DNAJC15Q9Y5T4 150 aa11.87□□□□□ -0.51
SNX17-208ENST00000493711 ZFC3H1O60293 1989 aaKnown RBP11.87□□□□□ -0.51
SNX17-208ENST00000493711 TDRD6O60522 2096 aaKnown RBP11.87□□□□□ -0.51
SNX17-208ENST00000493711 ARHGEF17Q96PE2 2063 aaPredicted RBP11.87□□□□□ -0.51
SNX17-208ENST00000493711 ATRXP46100 2492 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 MAP1BP46821 2468 aaKnown RBP11.86□□□□□ -0.51
SNX17-208ENST00000493711 RALGAPA1Q6GYQ0 2036 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 ARID1BQ8NFD5 2236 aaPredicted RBP11.86□□□□□ -0.51
SNX17-208ENST00000493711 USP24Q9UPU5 2620 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 A0A088AWK7 358 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 FITM1A5D6W6 292 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 EFCAB7A8K855 629 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 TMEM150CB9EJG8 249 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 NDUFS4O43181 175 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 OR2B3O76000 313 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 SEMA3DO95025 777 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 FOLR1P15328 257 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 ZNF10P21506 573 aaPredicted RBP11.86□□□□□ -0.51
SNX17-208ENST00000493711 TSFMP43897 325 aaKnown RBP11.86□□□□□ -0.51
SNX17-208ENST00000493711 ARSFP54793 590 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 VSX2P58304 361 aaPredicted RBP11.86□□□□□ -0.51
SNX17-208ENST00000493711 COL9A2Q14055 689 aaPredicted RBP11.86□□□□□ -0.51
SNX17-208ENST00000493711 C16orf72Q14CZ0 275 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 IMPG1Q17R60 797 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 UGT3A2Q3SY77 523 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.86□□□□□ -0.51
SNX17-208ENST00000493711 WASHC2DQ5SRD0 308 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 TMEM164Q5U3C3 297 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 CLEC6AQ6EIG7 209 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 FAM47EQ6ZV65 393 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 ABHD13Q7L211 337 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 RAB11FIP2Q7L804 512 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 VN1R4Q7Z5H5 301 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 PPP1R3BQ86XI6 285 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 PARP9Q8IXQ6 854 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 RCBTB1Q8NDN9 531 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 CREB3L4Q8TEY5 395 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 STON2Q8WXE9 905 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 ZNF501Q96CX3 271 aaPredicted RBP11.86□□□□□ -0.51
SNX17-208ENST00000493711 QRFPRQ96P65 431 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 TRIM55Q9BYV6 548 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 ZNF395Q9H8N7 513 aaPredicted RBP11.86□□□□□ -0.51
SNX17-208ENST00000493711 CLK4Q9HAZ1 481 aaKnown RBP11.86□□□□□ -0.51
SNX17-208ENST00000493711 SLCO1B3Q9NPD5 702 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 IRAK4Q9NWZ3 460 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 RALYQ9UKM9 306 aaKnown RBP11.86□□□□□ -0.51
SNX17-208ENST00000493711 LOXL2Q9Y4K0 774 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 SLC22A7Q9Y694 548 aa11.86□□□□□ -0.51
SNX17-208ENST00000493711 LOC105369274A0A096LPK9 316 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 LOC102723532A0A0G2JNH3 316 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 GMNCA6NCL1 334 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 MAGEB17A8MXT2 336 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 NPIPB8E9PQR5 432 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 PLD2O14939 933 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 POLR1CO15160 346 aaPredicted RBP11.85□□□□□ -0.51
SNX17-208ENST00000493711 CASC3O15234 703 aaKnown RBP11.85□□□□□ -0.51
SNX17-208ENST00000493711 PRAMEF10O60809 474 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 RSL1D1O76021 490 aaKnown RBP11.85□□□□□ -0.51
SNX17-208ENST00000493711 PDYNP01213 254 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 EIF2S1P05198 315 aaKnown RBP11.85□□□□□ -0.51
SNX17-208ENST00000493711 SERPIND1P05546 499 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 JMJD7P0C870 316 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 FGF5P12034 268 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 LSP1P33241 339 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 FOXA1P55317 472 aa11.85□□□□□ -0.51
SNX17-208ENST00000493711 GNGT1P63211 74 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms