RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 MDS2Q8NDY4 140 aa9.67□□□□□ -0.86
NUDCD3-210ENST00000493613 PEX11GQ96HA9 241 aa9.67□□□□□ -0.86
NUDCD3-210ENST00000493613 PHF12Q96QT6 1004 aa9.67□□□□□ -0.86
NUDCD3-210ENST00000493613 LPAR4Q99677 370 aa9.67□□□□□ -0.86
NUDCD3-210ENST00000493613 NPAS2Q99743 824 aa9.67□□□□□ -0.86
NUDCD3-210ENST00000493613 UTP23Q9BRU9 249 aaKnown RBP9.67□□□□□ -0.86
NUDCD3-210ENST00000493613 HES7Q9BYE0 225 aa9.67□□□□□ -0.86
NUDCD3-210ENST00000493613 MMP25Q9NPA2 562 aa9.67□□□□□ -0.86
NUDCD3-210ENST00000493613 CHST11Q9NPF2 352 aa9.67□□□□□ -0.86
NUDCD3-210ENST00000493613 TAS2R13Q9NYV9 303 aa9.67□□□□□ -0.86
NUDCD3-210ENST00000493613 SLC22A7Q9Y694 548 aa9.67□□□□□ -0.86
NUDCD3-210ENST00000493613 PKDREJQ9NTG1 2253 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 PABPN1LA6NDY0 278 aaKnown RBP9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 MAGEB17A8MXT2 336 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 NDUFS4O43181 175 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 MAN1A2O60476 641 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 HIST1H2AGP0C0S8 130 aaPredicted RBP9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 ESRRAP11474 423 aaPredicted RBP9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 CD46P15529 392 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 NPPBP16860 134 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 PGAM1P18669 254 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 HIST1H2ADP20671 130 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 IL10P22301 178 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 PTGER4P35408 488 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 CD96P40200 585 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 CDKN2DP55273 166 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 OR4D2P58180 307 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 TIAL1Q01085 375 aaKnown RBP eCLIP9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 MEF2AQ02078 507 aaPredicted RBP9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 RHAGQ02094 409 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 ALDH6A1Q02252 535 aaKnown RBP9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 OC90Q02509 493 aaPredicted RBP9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 DHX9Q08211 1270 aaKnown RBP9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 CRYMQ14894 314 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 HERC3Q15034 1050 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 PPP1R7Q15435 360 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 PHKG1Q16816 387 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 ZNF630Q2M218 657 aaPredicted RBP9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 SPINK14Q6IE38 97 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 XKRXQ6PP77 449 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 PAQR3Q6TCH7 311 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 GDF7Q7Z4P5 450 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 SLC5A8Q8N695 610 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 HORMAD2Q8N7B1 307 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 TMEM178AQ8NBL3 297 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 MFSD9Q8NBP5 474 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 C2CD4AQ8NCU7 369 aaPredicted RBP9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 ZNF740Q8NDX6 193 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 OR5T3Q8NGG3 340 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 GABPB2Q8TAK5 448 aaPredicted RBP9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 GRK7Q8WTQ7 553 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 THAP3Q8WTV1 239 aaPredicted RBP9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 TSLPQ969D9 159 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 PYCR2Q96C36 320 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 LINGO1Q96FE5 620 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 SCMH1Q96GD3 660 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 MAGED4Q96JG8 741 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 HIST1H2AHQ96KK5 128 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 GPR137Q96N19 417 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 FRMD6Q96NE9 622 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 OR1F2PQ96R84 312 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 HIST1H2AJQ99878 128 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 HAUS8Q9BT25 410 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 H2AFJQ9BTM1 129 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 SGPP1Q9BX95 441 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 TSPAN10Q9H1Z9 355 aaPredicted RBP9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 PPANQ9NQ55 473 aaKnown RBP9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 LANCL2Q9NS86 450 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 ARL15Q9NXU5 204 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 TINAGQ9UJW2 476 aa9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 PHF3Q92576 2039 aaKnown RBP9.66□□□□□ -0.86
NUDCD3-210ENST00000493613 GOLGA6L10A0A0M3HER8 536 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 GABRR3A8MPY1 467 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 SLC16A5O15375 505 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 OR1F1O43749 312 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 GALR3O60755 368 aaPredicted RBP9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 BANF1O75531 89 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 SERPIND1P05546 499 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 FHP07954 510 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 SNRPB2P08579 225 aaKnown RBP9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 COX6B1P14854 86 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 JAK1P23458 1154 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 GABRB3P28472 473 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 FNTAP49354 379 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 CCR8P51685 355 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 SLC26A5P58743 744 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 TAS2R50P59544 299 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 SKP1P63208 163 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 ADORA2A-AS1P86434 159 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 USP10Q14694 798 aaKnown RBP9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 C3AR1Q16581 482 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 ZXDCQ2QGD7 858 aaPredicted RBP9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 DEFB134Q4QY38 66 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 KRTCAP3Q53RY4 240 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 RBM20Q5T481 1227 aaKnown RBP9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 RNASEH2BQ5TBB1 312 aaKnown RBP9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 DUPD1Q68J44 220 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 GALNTL5Q7Z4T8 443 aa9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 FAM98AQ8NCA5 519 aaKnown RBP9.65□□□□□ -0.86
NUDCD3-210ENST00000493613 PLPP5Q8NEB5 264 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms