RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 SSPNQ14714 243 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 HADHQ16836 314 aaKnown RBP6.64□□□□□ -1.35
VPS13B-205ENST00000493587 TIMM50Q3ZCQ8 353 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 ODR4Q5SWX8 454 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 ZNF613Q6PF04 617 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 DPH6Q7L8W6 267 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 PROSER1Q86XN7 944 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 PLD6Q8N2A8 252 aaKnown RBP6.64□□□□□ -1.35
VPS13B-205ENST00000493587 SLC35B2Q8TB61 432 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 MFSD3Q96ES6 412 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 TMEM175Q9BSA9 504 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 ACE2Q9BYF1 805 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-205ENST00000493587 CRTAC1Q9NQ79 661 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 TLR9Q9NR96 1032 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 SH3BP4Q9P0V3 963 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 PPP2R3BQ9Y5P8 575 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 HMX2A2RU54 273 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 ISM1B1AKI9 464 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 PRR23D1E9PI22 279 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-205ENST00000493587 K7ERI5 159 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 CLDN4O14493 209 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 VEGFDO43915 354 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 STX11O75558 287 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 MED6O75586 246 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 PRR23D2P0DMB1 279 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-205ENST00000493587 ARP10275 920 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 UMPSP11172 480 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 PTBP1P26599 531 aaKnown RBP eCLIP6.64□□□□□ -1.35
VPS13B-205ENST00000493587 RPL7AP62424 266 aaKnown RBP6.64□□□□□ -1.35
VPS13B-205ENST00000493587 PPP3CAQ08209 521 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 USP10Q14694 798 aaKnown RBP6.64□□□□□ -1.35
VPS13B-205ENST00000493587 MED22Q15528 200 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 SUPT20HL1Q3ZLR7 823 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 RABL3Q5HYI8 236 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 PABPC1L2AQ5JQF8 200 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 BCL2L15Q5TBC7 163 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 SAXO2Q658L1 398 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 TXNRD3NBQ6F5E7 133 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 CATSPERGQ6ZRH7 1159 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 B3GNT8Q7Z7M8 397 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 TGIF2LXQ8IUE1 241 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 SYNPOQ8N3V7 929 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 OR5J2Q8NH18 312 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.64□□□□□ -1.353e-7■■■■■ 37.7
VPS13B-205ENST00000493587 LRRN4Q8WUT4 740 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 SLC22A18Q96BI1 424 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 C11orf24Q96F05 449 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-205ENST00000493587 SENP8Q96LD8 212 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 SORCS2Q96PQ0 1159 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 SLC2A13Q96QE2 648 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 HOPXQ9BPY8 73 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-205ENST00000493587 JAM3Q9BX67 310 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 CHIAQ9BZP6 476 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 OLA1Q9NTK5 396 aaKnown RBP6.64□□□□□ -1.35
VPS13B-205ENST00000493587 PPP4R1LQ9P1A2 415 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 PAK5Q9P286 719 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 STUB1Q9UNE7 303 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 PRKAB1Q9Y478 270 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 PCDHB14Q9Y5E9 798 aa6.64□□□□□ -1.35
VPS13B-205ENST00000493587 CITO14578 2027 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 IGKV6D-21A0A0A0MT36 114 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 A0A0J9YYE9 177 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 WDR27A2RRH5 827 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 SMIM30A4D0T7 59 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 CRTAPO75718 401 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-205ENST00000493587 IGHV2-70P01814 119 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 IGHA2P01877 340 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 LPLP06858 475 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 ISL1P61371 349 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 SLC9A5Q14940 896 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 STXBP5Q5T5C0 1151 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 C15orf39Q6ZRI6 1047 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 DNAJB7Q7Z6W7 309 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-205ENST00000493587 FAM217AQ8IXS0 508 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 ZNF655Q8N720 491 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-205ENST00000493587 FAM45AQ8TCE6 357 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 FBXO17Q96EF6 278 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 PPP3R2Q96LZ3 170 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 KREMEN1Q96MU8 473 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 TAS2R3Q9NYW6 316 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 NFKBIL1Q9UBC1 381 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-205ENST00000493587 KIF25Q9UIL4 384 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 POLR3HQ9Y535 204 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-205ENST00000493587 THSD7BQ9C0I4 1608 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 BTBD17A6NE02 478 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 URADA6NGE7 173 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 SLC15A5A6NIM6 579 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 L7N2F9 121 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 PAGE1O75459 146 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 ATG7O95352 703 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 MPC2O95563 127 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 ITGBL1O95965 494 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-205ENST00000493587 PGK1P00558 417 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 RHCEP18577 417 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 RFC3P40938 356 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 MAN2A2P49641 1150 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 NUMBP49757 651 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 STAT5BP51692 787 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 RAB4BP61018 213 aa6.63□□□□□ -1.35
VPS13B-205ENST00000493587 AARDQ4LEZ3 155 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms