RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 IMPA1P29218 277 aa16.57■□□□□ 0.24
NUP50-218ENST00000493456 SKIV2L2P42285 1042 aaKnown RBP16.57■□□□□ 0.24
NUP50-218ENST00000493456 CLCN7P51798 805 aa16.57■□□□□ 0.24
NUP50-218ENST00000493456 RPS6KA1Q15418 735 aa16.57■□□□□ 0.24
NUP50-218ENST00000493456 PDSS2Q86YH6 399 aa16.57■□□□□ 0.24
NUP50-218ENST00000493456 ASB11Q8WXH4 323 aa16.57■□□□□ 0.24
NUP50-218ENST00000493456 RND1Q92730 232 aa16.57■□□□□ 0.24
NUP50-218ENST00000493456 NINJ1Q92982 152 aa16.57■□□□□ 0.24
NUP50-218ENST00000493456 TSLPQ969D9 159 aa16.57■□□□□ 0.24
NUP50-218ENST00000493456 MFSD3Q96ES6 412 aa16.57■□□□□ 0.24
NUP50-218ENST00000493456 FOXC2Q99958 501 aa16.57■□□□□ 0.24
NUP50-218ENST00000493456 MACROD1Q9BQ69 325 aa16.57■□□□□ 0.24
NUP50-218ENST00000493456 RBCK1Q9BYM8 510 aa16.57■□□□□ 0.24
NUP50-218ENST00000493456 PCBD2Q9H0N5 130 aa16.57■□□□□ 0.24
NUP50-218ENST00000493456 CXXC4Q9H2H0 198 aa16.57■□□□□ 0.24
NUP50-218ENST00000493456 CCDC177Q9NQR7 707 aaPredicted RBP16.57■□□□□ 0.24
NUP50-218ENST00000493456 RNF6Q9Y252 685 aa16.57■□□□□ 0.24
NUP50-218ENST00000493456 REXO2Q9Y3B8 237 aaKnown RBP16.57■□□□□ 0.24
NUP50-218ENST00000493456 SLC22A7Q9Y694 548 aa16.57■□□□□ 0.24
NUP50-218ENST00000493456 NKX2-6A6NCS4 301 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 USP27XA6NNY8 438 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 GOLGA8KD6RF30 607 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 GOLGA8TH3BQL2 631 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 GFYI3L273 518 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 FCHO1O14526 889 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 PRMT3O60678 531 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 TOXO94900 526 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 FTCDO95954 541 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 FHP07954 510 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 HOXD4P09016 255 aaPredicted RBP16.56■□□□□ 0.24
NUP50-218ENST00000493456 SLC35G6P0C7Q6 338 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 MPC1LP0DKB6 136 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 ENO3P13929 434 aaPredicted RBP16.56■□□□□ 0.24
NUP50-218ENST00000493456 TFEBP19484 476 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 JAK1P23458 1154 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 MEOX1P50221 254 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 HLCSP50747 726 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 ITGA8P53708 1063 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 MLF1P58340 268 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 SKP1P63208 163 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 HERC3Q15034 1050 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 ARHGAP11AQ6P4F7 1023 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 PRUNE1Q86TP1 453 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 ASPGQ86U10 573 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 ZNF227Q86WZ6 799 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 KIF2BQ8N4N8 673 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 KCT2Q8NC54 265 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 PEX11GQ96HA9 241 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 HES6Q96HZ4 224 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 INTS10Q9NVR2 710 aaKnown RBP16.56■□□□□ 0.24
NUP50-218ENST00000493456 NAALAD2Q9Y3Q0 740 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 HCFC1P51610 2035 aa16.56■□□□□ 0.24
NUP50-218ENST00000493456 CDC40O60508 579 aaKnown RBP eCLIP16.55■□□□□ 0.24
NUP50-218ENST00000493456 FAM155BO75949 473 aa16.55■□□□□ 0.24
NUP50-218ENST00000493456 IST1P53990 364 aa16.55■□□□□ 0.24
NUP50-218ENST00000493456 TBPL1P62380 186 aa16.55■□□□□ 0.24
NUP50-218ENST00000493456 MEF2AQ02078 507 aaPredicted RBP16.55■□□□□ 0.24
NUP50-218ENST00000493456 FOLH1Q04609 750 aa16.55■□□□□ 0.24
NUP50-218ENST00000493456 SEL1L2Q5TEA6 688 aa16.55■□□□□ 0.24
NUP50-218ENST00000493456 KIAA0930Q6ICG6 404 aaPredicted RBP16.55■□□□□ 0.24
NUP50-218ENST00000493456 NIPAL1Q6NVV3 410 aa16.55■□□□□ 0.24
NUP50-218ENST00000493456 TGIF2LYQ8IUE0 185 aa16.55■□□□□ 0.24
NUP50-218ENST00000493456 CILP2Q8IUL8 1156 aa16.55■□□□□ 0.24
NUP50-218ENST00000493456 ARMC10Q8N2F6 343 aa16.55■□□□□ 0.24
NUP50-218ENST00000493456 C16orf52Q8NHV5 167 aa16.55■□□□□ 0.24
NUP50-218ENST00000493456 SLC13A3Q8WWT9 602 aa16.55■□□□□ 0.24
NUP50-218ENST00000493456 TBC1D20Q96BZ9 403 aa16.55■□□□□ 0.24
NUP50-218ENST00000493456 PLSCR2Q9NRY7 297 aa16.55■□□□□ 0.24
NUP50-218ENST00000493456 SYBUQ9NX95 663 aa16.55■□□□□ 0.24
NUP50-218ENST00000493456 SOX13Q9UN79 622 aa16.55■□□□□ 0.24
NUP50-218ENST00000493456 INTS1Q8N201 2190 aaKnown RBP16.54■□□□□ 0.24
NUP50-218ENST00000493456 SAGE2PA6NJ88 616 aa16.54■□□□□ 0.24
NUP50-218ENST00000493456 HS6ST1O60243 411 aa16.54■□□□□ 0.24
NUP50-218ENST00000493456 ZWINTO95229 277 aa16.54■□□□□ 0.24
NUP50-218ENST00000493456 PAMP19021 973 aa16.54■□□□□ 0.24
NUP50-218ENST00000493456 RPL22P35268 128 aaKnown RBP16.54■□□□□ 0.24
NUP50-218ENST00000493456 GRK3P35626 688 aa16.54■□□□□ 0.24
NUP50-218ENST00000493456 COILP38432 576 aaPredicted RBP16.54■□□□□ 0.24
NUP50-218ENST00000493456 BASP1P80723 227 aaKnown RBP16.54■□□□□ 0.24
NUP50-218ENST00000493456 MYBPHQ13203 477 aa16.54■□□□□ 0.24
NUP50-218ENST00000493456 CMPK2Q5EBM0 449 aa16.54■□□□□ 0.24
NUP50-218ENST00000493456 ARMC3Q5W041 872 aa16.54■□□□□ 0.24
NUP50-218ENST00000493456 CAPN13Q6MZZ7 669 aaPredicted RBP16.54■□□□□ 0.24
NUP50-218ENST00000493456 C4orf22Q6V702 233 aa16.54■□□□□ 0.24
NUP50-218ENST00000493456 ACAD11Q709F0 780 aa16.54■□□□□ 0.24
NUP50-218ENST00000493456 KIAA1328Q86T90 577 aa16.54■□□□□ 0.24
NUP50-218ENST00000493456 SLC26A11Q86WA9 606 aa16.54■□□□□ 0.24
NUP50-218ENST00000493456 SULF2Q8IWU5 870 aa16.54■□□□□ 0.24
NUP50-218ENST00000493456 CLYBLQ8N0X4 340 aa16.54■□□□□ 0.24
NUP50-218ENST00000493456 PRELID2Q8N945 189 aa16.54■□□□□ 0.24
NUP50-218ENST00000493456 ZFP62Q8NB50 900 aaPredicted RBP16.54■□□□□ 0.24
NUP50-218ENST00000493456 RNF214Q8ND24 703 aa16.54■□□□□ 0.24
NUP50-218ENST00000493456 ACRBPQ8NEB7 543 aa16.54■□□□□ 0.24
NUP50-218ENST00000493456 C1orf54Q8WWF1 131 aa16.54■□□□□ 0.24
NUP50-218ENST00000493456 KCNJ9Q92806 393 aa16.54■□□□□ 0.24
NUP50-218ENST00000493456 SLC30A3Q99726 388 aa16.54■□□□□ 0.24
NUP50-218ENST00000493456 UCK2Q9BZX2 261 aa16.54■□□□□ 0.24
NUP50-218ENST00000493456 HRH3Q9Y5N1 445 aa16.54■□□□□ 0.24
NUP50-218ENST00000493456 ZNF860A6NHJ4 632 aa16.53■□□□□ 0.24
NUP50-218ENST00000493456 PEX1O43933 1283 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms