RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 HUS1BQ8NHY5 278 aa16.41■□□□□ 0.22
LIME1-208ENST00000493265 SLC13A3Q8WWT9 602 aa16.41■□□□□ 0.22
LIME1-208ENST00000493265 SELENOMQ8WWX9 145 aa16.41■□□□□ 0.22
LIME1-208ENST00000493265 ZNF501Q96CX3 271 aaPredicted RBP16.41■□□□□ 0.22
LIME1-208ENST00000493265 FRG2BQ96QU4 278 aa16.41■□□□□ 0.22
LIME1-208ENST00000493265 NT5DC2Q9H857 520 aa16.41■□□□□ 0.22
LIME1-208ENST00000493265 SLCO1B3Q9NPD5 702 aa16.41■□□□□ 0.22
LIME1-208ENST00000493265 SIDT1Q9NXL6 827 aaKnown RBP16.41■□□□□ 0.22
LIME1-208ENST00000493265 FAM53CQ9NYF3 392 aa16.41■□□□□ 0.22
LIME1-208ENST00000493265 MARCOQ9UEW3 520 aaPredicted RBP16.41■□□□□ 0.22
LIME1-208ENST00000493265 ZFP69BQ9UJL9 534 aa16.41■□□□□ 0.22
LIME1-208ENST00000493265 SERTAD3Q9UJW9 196 aa16.41■□□□□ 0.22
LIME1-208ENST00000493265 RARRES3Q9UL19 164 aa16.41■□□□□ 0.22
LIME1-208ENST00000493265 SATB2Q9UPW6 733 aa16.41■□□□□ 0.22
LIME1-208ENST00000493265 RAP2CQ9Y3L5 183 aa16.41■□□□□ 0.22
LIME1-208ENST00000493265 AP1M2Q9Y6Q5 423 aa16.41■□□□□ 0.22
LIME1-208ENST00000493265 HEATR5BQ9P2D3 2071 aa16.41■□□□□ 0.22
LIME1-208ENST00000493265 KLF11O14901 512 aa16.4■□□□□ 0.22
LIME1-208ENST00000493265 PLD2O14939 933 aa16.4■□□□□ 0.22
LIME1-208ENST00000493265 POLR1CO15160 346 aaPredicted RBP16.4■□□□□ 0.22
LIME1-208ENST00000493265 TGFB1P01137 390 aa16.4■□□□□ 0.22
LIME1-208ENST00000493265 UROSP10746 265 aa16.4■□□□□ 0.22
LIME1-208ENST00000493265 AHRP35869 848 aa16.4■□□□□ 0.22
LIME1-208ENST00000493265 ITGA1P56199 1179 aa16.4■□□□□ 0.22
LIME1-208ENST00000493265 PHEXP78562 749 aa16.4■□□□□ 0.22
LIME1-208ENST00000493265 RELAQ04206 551 aa16.4■□□□□ 0.22
LIME1-208ENST00000493265 GALNT1Q10472 559 aaPredicted RBP16.4■□□□□ 0.22
LIME1-208ENST00000493265 PRAMEF17Q5VTA0 474 aa16.4■□□□□ 0.22
LIME1-208ENST00000493265 VN1R5Q7Z5H4 357 aa16.4■□□□□ 0.22
LIME1-208ENST00000493265 GPR135Q8IZ08 494 aa16.4■□□□□ 0.22
LIME1-208ENST00000493265 CLYBLQ8N0X4 340 aa16.4■□□□□ 0.22
LIME1-208ENST00000493265 ZNF655Q8N720 491 aaPredicted RBP16.4■□□□□ 0.22
LIME1-208ENST00000493265 TRPV3Q8NET8 790 aa16.4■□□□□ 0.22
LIME1-208ENST00000493265 WDR36Q8NI36 951 aaKnown RBP16.4■□□□□ 0.22
LIME1-208ENST00000493265 ZCCHC10Q8TBK6 192 aa16.4■□□□□ 0.22
LIME1-208ENST00000493265 THAP11Q96EK4 314 aa16.4■□□□□ 0.22
LIME1-208ENST00000493265 NLNQ9BYT8 704 aa16.4■□□□□ 0.22
LIME1-208ENST00000493265 PITHD1Q9GZP4 211 aaPredicted RBP16.4■□□□□ 0.22
LIME1-208ENST00000493265 CHRNA10Q9GZZ6 450 aa16.4■□□□□ 0.22
LIME1-208ENST00000493265 PTGDR2Q9Y5Y4 395 aa16.4■□□□□ 0.22
LIME1-208ENST00000493265 A0A087WV48 116 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 A0A1W2PNU3 283 aaPredicted RBP16.39■□□□□ 0.21
LIME1-208ENST00000493265 MAGEB17A8MXT2 336 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 SAP18O00422 153 aaKnown RBP16.39■□□□□ 0.21
LIME1-208ENST00000493265 SRPX2O60687 465 aaPredicted RBP16.39■□□□□ 0.21
LIME1-208ENST00000493265 ULK1O75385 1050 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 SKAP2O75563 359 aaPredicted RBP16.39■□□□□ 0.21
LIME1-208ENST00000493265 CHEK2O96017 543 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 SLC35G6P0C7Q6 338 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 RPL14P50914 215 aaKnown RBP16.39■□□□□ 0.21
LIME1-208ENST00000493265 RPS13P62277 151 aaKnown RBP16.39■□□□□ 0.21
LIME1-208ENST00000493265 MC2RQ01718 297 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 OCRLQ01968 901 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 RGS1Q08116 209 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 ABRAXAS2Q15018 415 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 TOR1AIP1Q5JTV8 583 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 KANK2Q63ZY3 851 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 CRLF3Q8IUI8 442 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 TMEM126BQ8IUX1 230 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 DDIASQ8IXT1 998 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 BMPERQ8N8U9 685 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 KCT2Q8NC54 265 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 CAMKVQ8NCB2 501 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 TTLQ8NG68 377 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 WDR20Q8TBZ3 569 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 ZNF473Q8WTR7 871 aaKnown RBP16.39■□□□□ 0.21
LIME1-208ENST00000493265 PMEPA1Q969W9 287 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 PPP1R36Q96LQ0 422 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 SARGQ9BW04 601 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 SLC7A5P2Q9GIP4 190 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 RHBGQ9H310 441 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 OR51B5Q9H339 312 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 DMRT3Q9NQL9 472 aa16.39■□□□□ 0.21
LIME1-208ENST00000493265 B4E171 279 aa16.38■□□□□ 0.21
LIME1-208ENST00000493265 CLEC3AO75596 197 aa16.38■□□□□ 0.21
LIME1-208ENST00000493265 VIMP08670 466 aaKnown RBP16.38■□□□□ 0.21
LIME1-208ENST00000493265 LINC00032P0C843 101 aa16.38■□□□□ 0.21
LIME1-208ENST00000493265 TSPAN7P41732 249 aa16.38■□□□□ 0.21
LIME1-208ENST00000493265 EIF3IQ13347 325 aaKnown RBP16.38■□□□□ 0.21
LIME1-208ENST00000493265 PDCD2Q16342 344 aaPredicted RBP16.38■□□□□ 0.21
LIME1-208ENST00000493265 TCTE1Q5JU00 501 aa16.38■□□□□ 0.21
LIME1-208ENST00000493265 PPP1R3BQ86XI6 285 aa16.38■□□□□ 0.21
LIME1-208ENST00000493265 AFAP1L2Q8N4X5 818 aa16.38■□□□□ 0.21
LIME1-208ENST00000493265 TTC29Q8NA56 475 aaPredicted RBP16.38■□□□□ 0.21
LIME1-208ENST00000493265 CREB3L4Q8TEY5 395 aa16.38■□□□□ 0.21
LIME1-208ENST00000493265 TWIST2Q8WVJ9 160 aa16.38■□□□□ 0.21
LIME1-208ENST00000493265 NXPE2Q96DL1 559 aa16.38■□□□□ 0.21
LIME1-208ENST00000493265 F2RL3Q96RI0 385 aa16.38■□□□□ 0.21
LIME1-208ENST00000493265 KLHL31Q9H511 634 aa16.38■□□□□ 0.21
LIME1-208ENST00000493265 NDOR1Q9UHB4 597 aa16.38■□□□□ 0.21
LIME1-208ENST00000493265 RUVBL1Q9Y265 456 aaKnown RBP16.38■□□□□ 0.21
LIME1-208ENST00000493265 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.38■□□□□ 0.21
LIME1-208ENST00000493265 KNTC1P50748 2209 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 A0A0G2JN53 185 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 ZSCAN9O15535 394 aaPredicted RBP16.37■□□□□ 0.21
LIME1-208ENST00000493265 ZNF749O43361 778 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 SCRG1O75711 98 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 SNUPNO95149 360 aaKnown RBP16.37■□□□□ 0.21
LIME1-208ENST00000493265 TNFSF15O95150 251 aa16.37■□□□□ 0.21
LIME1-208ENST00000493265 ZIC2O95409 532 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms