RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	OR4D2	P58180	307 aa		12.85	□□□□□ -0.35
SAMM50-204	ENST00000493161	TBPL1	P62380	186 aa		12.85	□□□□□ -0.35
SAMM50-204	ENST00000493161	OLR1	P78380	273 aa		12.85	□□□□□ -0.35
SAMM50-204	ENST00000493161	CTBP1	Q13363	440 aa		12.85	□□□□□ -0.35
SAMM50-204	ENST00000493161	KIAA0930	Q6ICG6	404 aa	Predicted RBP	12.85	□□□□□ -0.35
SAMM50-204	ENST00000493161	CEP128	Q6ZU80	1094 aa		12.85	□□□□□ -0.35
SAMM50-204	ENST00000493161	UBE2R2	Q712K3	238 aa	Predicted RBP	12.85	□□□□□ -0.35
SAMM50-204	ENST00000493161	RPS19BP1	Q86WX3	136 aa	Known RBP	12.85	□□□□□ -0.35
SAMM50-204	ENST00000493161	SLC13A3	Q8WWT9	602 aa		12.85	□□□□□ -0.35
SAMM50-204	ENST00000493161	POM121	Q96HA1	1249 aa		12.85	□□□□□ -0.35
SAMM50-204	ENST00000493161	CCDC177	Q9NQR7	707 aa	Predicted RBP	12.85	□□□□□ -0.35
SAMM50-204	ENST00000493161	NPDC1	Q9NQX5	325 aa	Predicted RBP	12.85	□□□□□ -0.35
SAMM50-204	ENST00000493161	FBXO6	Q9NRD1	293 aa	Predicted RBP	12.85	□□□□□ -0.35
SAMM50-204	ENST00000493161	ADAMTS6	Q9UKP5	1117 aa		12.85	□□□□□ -0.35
SAMM50-204	ENST00000493161	GTF3C1	Q12789	2109 aa		12.85	□□□□□ -0.35
SAMM50-204	ENST00000493161		A0A1B0GTH9	108 aa		12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	MAGEB17	A8MXT2	336 aa		12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	PFDN6	O15212	129 aa		12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	ZBTB14	O43829	449 aa		12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	KIF5C	O60282	957 aa		12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	IGFBP2	P18065	325 aa		12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	MEF2A	Q02078	507 aa	Predicted RBP	12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	RPS6KA1	Q15418	735 aa		12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	TRIP13	Q15645	432 aa	Predicted RBP	12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	CCNG2	Q16589	344 aa		12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	SKOR2	Q2VWA4	1001 aa	Predicted RBP	12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	ZNF470	Q6ECI4	717 aa		12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	CAPN13	Q6MZZ7	669 aa	Predicted RBP	12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	ASPG	Q86U10	573 aa		12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	CD163	Q86VB7	1156 aa		12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	CPNE9	Q8IYJ1	553 aa		12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	RPRML	Q8N4K4	120 aa		12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	HORMAD2	Q8N7B1	307 aa		12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	FAM98A	Q8NCA5	519 aa	Known RBP	12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	CAMKV	Q8NCB2	501 aa		12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	CD200R1	Q8TD46	325 aa		12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	NRGN	Q92686	78 aa		12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	GPR21	Q99679	349 aa		12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	OLFM1	Q99784	485 aa		12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	BAG1	Q99933	345 aa	Predicted RBP	12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	UCK2	Q9BZX2	261 aa		12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	ATG10	Q9H0Y0	220 aa		12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	INTS10	Q9NVR2	710 aa	Known RBP	12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	DHRS7	Q9Y394	339 aa		12.84	□□□□□ -0.35
SAMM50-204	ENST00000493161	ITPR3	Q14573	2671 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	CTAGE9	A4FU28	777 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	B4GALT2	O60909	372 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	TPO	P07202	933 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	FH	P07954	510 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	CDH1	P12830	882 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	PTMS	P20962	102 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	MEOX1	P50221	254 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	ITGA8	P53708	1063 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	MLF1	P58340	268 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	TAS2R50	P59544	299 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	BTG2	P78543	158 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	KRTAP21-3	Q3LHN1	58 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	TTLL9	Q3SXZ7	439 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	MEI1	Q5TIA1	1274 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	ANKRD22	Q5VYY1	191 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	GSTA5	Q7RTV2	222 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	SULF2	Q8IWU5	870 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	CYP4X1	Q8N118	509 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	LGI4	Q8N135	537 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	ZNF740	Q8NDX6	193 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	FAM57A	Q8TBR7	257 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	ALKBH8	Q96BT7	664 aa	Known RBP	12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	THAP11	Q96EK4	314 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	TRIM45	Q9H8W5	580 aa	Predicted RBP	12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	COQ3	Q9NZJ6	369 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	PDE10A	Q9Y233	779 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	SLC22A7	Q9Y694	548 aa		12.83	□□□□□ -0.36
SAMM50-204	ENST00000493161	CTAGE15	A4D2H0	777 aa		12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	FAM90A27P	A6NNH2	459 aa		12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	AP3B1	O00203	1094 aa		12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	CHST10	O43529	356 aa		12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	GALR3	O60755	368 aa	Predicted RBP	12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	PDE9A	O76083	593 aa		12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	TPSB2	P20231	275 aa		12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	HRH2	P25021	359 aa		12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	PTGS2	P35354	604 aa		12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	CYB561	P49447	251 aa		12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	ART1	P52961	327 aa		12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	TIAL1	Q01085	375 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	TFF3	Q07654	80 aa		12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	DHX34	Q14147	1143 aa	Known RBP	12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	TPSAB1	Q15661	275 aa		12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	DEFB134	Q4QY38	66 aa		12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	CMPK2	Q5EBM0	449 aa		12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	CASC4	Q6P4E1	433 aa		12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	DRICH1	Q6PGQ1	229 aa	Predicted RBP	12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	CTAGE6	Q86UF2	777 aa		12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	CAND1	Q86VP6	1230 aa	Known RBP	12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	CCDC71	Q8IV32	467 aa	Predicted RBP	12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	AFAP1L2	Q8N4X5	818 aa		12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	MFSD9	Q8NBP5	474 aa		12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	NFAM1	Q8NET5	270 aa	Predicted RBP	12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	KCNJ9	Q92806	393 aa		12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	TBC1D20	Q96BZ9	403 aa		12.82	□□□□□ -0.36
SAMM50-204	ENST00000493161	OR1F2P	Q96R84	312 aa		12.82	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms