RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 LRRK2Q5S007 2527 aa8.39□□□□□ -1.07
HDAC3-211ENST00000491581 A0A1W2PQ72 361 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 NCF1BA6NI72 391 aaPredicted RBP8.38□□□□□ -1.07
HDAC3-211ENST00000491581 NCF1CA8MVU1 366 aaPredicted RBP8.38□□□□□ -1.07
HDAC3-211ENST00000491581 CHST10O43529 356 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 FAM155BO75949 473 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 NSA2O95478 260 aaKnown RBP8.38□□□□□ -1.07
HDAC3-211ENST00000491581 C8GP07360 202 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 EDN3P14138 238 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 NCF1P14598 390 aaPredicted RBP8.38□□□□□ -1.07
HDAC3-211ENST00000491581 RFC3P40938 356 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 RPL21P46778 160 aaKnown RBP8.38□□□□□ -1.07
HDAC3-211ENST00000491581 AVPR1BP47901 424 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 RPS15AP62244 130 aaKnown RBP8.38□□□□□ -1.07
HDAC3-211ENST00000491581 PDIA2Q13087 525 aaKnown RBP8.38□□□□□ -1.07
HDAC3-211ENST00000491581 FAM53BQ14153 422 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 ABRAXAS2Q15018 415 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 TSNQ15631 228 aaKnown RBP8.38□□□□□ -1.07
HDAC3-211ENST00000491581 PPP1R3AQ16821 1122 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 RNFT1Q5M7Z0 435 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 GARNL3Q5VVW2 1013 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 PAPD4Q6PIY7 484 aaKnown RBP8.38□□□□□ -1.07
HDAC3-211ENST00000491581 LCTLQ6UWM7 567 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 GFRALQ6UXV0 394 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 C3P1Q6ZMU1 363 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 STRA8Q7Z7C7 330 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 TMPRSS11BQ86T26 416 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 ZNF227Q86WZ6 799 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 CNTN4Q8IWV2 1026 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 CYP4X1Q8N118 509 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 FBXO36Q8NEA4 188 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 OR56A3Q8NH54 315 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 CALML6Q8TD86 181 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 MCOLN3Q8TDD5 553 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 THAP3Q8WTV1 239 aaPredicted RBP8.38□□□□□ -1.07
HDAC3-211ENST00000491581 NR4A3Q92570 626 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 HAS2Q92819 552 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 MVB12AQ96EY5 273 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 LMF1Q96S06 567 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 DPH5Q9H2P9 285 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 KCNK13Q9HB14 408 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 ANKHQ9HCJ1 492 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 NECTIN3Q9NQS3 549 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 C14orf105Q9NVL8 296 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 RIC8BQ9NVN3 520 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 KLHL42Q9P2K6 505 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 SLC22A14Q9Y267 594 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 VPS9D1Q9Y2B5 631 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 PRRC2CQ9Y520 2896 aaKnown RBP8.38□□□□□ -1.07
HDAC3-211ENST00000491581 NAV2Q8IVL1 2488 aa8.38□□□□□ -1.07
HDAC3-211ENST00000491581 CRYBG3Q68DQ2 2970 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 SVILO95425 2214 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 KCNE1BA0A087WTH5 132 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 TRGV8A0A0C4DH27 118 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 FAM95CA0A1B0GW59 222 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 DYTNA2CJ06 578 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 OR5H15A6NDH6 313 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 ZNF839A8K0R7 811 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 H0YIG0 161 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 PCDH17O14917 1159 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 PHGDHO43175 533 aaKnown RBP8.37□□□□□ -1.07
HDAC3-211ENST00000491581 GALR3O60755 368 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-211ENST00000491581 SH3BGRLO75368 114 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 DDAH2O95865 285 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 TBX6O95947 436 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-211ENST00000491581 SSTR1P30872 391 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 HNRNPH1P31943 449 aaKnown RBP8.37□□□□□ -1.07
HDAC3-211ENST00000491581 HSD17B2P37059 387 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 CD96P40200 585 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 RGS4P49798 205 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 IL2P60568 153 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 GNG11P61952 73 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 DR1Q01658 176 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 C2orf54Q08AI8 447 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 TUBA3CQ13748 450 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 EFTUD2Q15029 972 aaKnown RBP eCLIP8.37□□□□□ -1.076e-7■■■□□ 16.6
HDAC3-211ENST00000491581 NSDHLQ15738 373 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 NDUFA9Q16795 377 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 TOR1AIP1Q5JTV8 583 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 ACER2Q5QJU3 275 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 ABHD17BQ5VST6 288 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 STEAP4Q687X5 459 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 TUBA3EQ6PEY2 450 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 VN1R5Q7Z5H4 357 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 THOC6Q86W42 341 aaKnown RBP8.37□□□□□ -1.07
HDAC3-211ENST00000491581 ZC3HC1Q86WB0 502 aaKnown RBP8.37□□□□□ -1.07
HDAC3-211ENST00000491581 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.37□□□□□ -1.07
HDAC3-211ENST00000491581 RNF175Q8N4F7 328 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 OR4K1Q8NGD4 311 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 UTP15Q8TED0 518 aaKnown RBP8.37□□□□□ -1.07
HDAC3-211ENST00000491581 DOK4Q8TEW6 326 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 GRK7Q8WTQ7 553 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 METTL21AQ8WXB1 218 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 NACC2Q96BF6 587 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 KRT12Q99456 494 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 CDCP1Q9H5V8 836 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 TINAGQ9UJW2 476 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 MTO1Q9Y2Z2 717 aaKnown RBP8.37□□□□□ -1.07
HDAC3-211ENST00000491581 VWA7Q9Y334 891 aa8.37□□□□□ -1.07
HDAC3-211ENST00000491581 COMMD10Q9Y6G5 202 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms