RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 GSTM2P28161 218 aa15.66■□□□□ 0.1
PDLIM2-217ENST00000491330 ATP6V0D1P61421 351 aa15.66■□□□□ 0.1
PDLIM2-217ENST00000491330 STXBP1P61764 594 aaKnown RBP15.66■□□□□ 0.1
PDLIM2-217ENST00000491330 TIAL1Q01085 375 aaKnown RBP eCLIP15.66■□□□□ 0.1
PDLIM2-217ENST00000491330 USP10Q14694 798 aaKnown RBP15.66■□□□□ 0.1
PDLIM2-217ENST00000491330 SYT16Q17RD7 645 aa15.66■□□□□ 0.1
PDLIM2-217ENST00000491330 CAPN12Q6ZSI9 719 aa15.66■□□□□ 0.1
PDLIM2-217ENST00000491330 VN1R4Q7Z5H5 301 aa15.66■□□□□ 0.1
PDLIM2-217ENST00000491330 SIRT6Q8N6T7 355 aa15.66■□□□□ 0.1
PDLIM2-217ENST00000491330 KCT2Q8NC54 265 aa15.66■□□□□ 0.1
PDLIM2-217ENST00000491330 ST6GALNAC3Q8NDV1 305 aa15.66■□□□□ 0.1
PDLIM2-217ENST00000491330 OR4K1Q8NGD4 311 aa15.66■□□□□ 0.1
PDLIM2-217ENST00000491330 FAR1Q8WVX9 515 aa15.66■□□□□ 0.1
PDLIM2-217ENST00000491330 PWWP2AQ96N64 755 aa15.66■□□□□ 0.1
PDLIM2-217ENST00000491330 OLFM1Q99784 485 aa15.66■□□□□ 0.1
PDLIM2-217ENST00000491330 CPNE1Q99829 537 aa15.66■□□□□ 0.1
PDLIM2-217ENST00000491330 WDR83Q9BRX9 315 aaKnown RBP15.66■□□□□ 0.1
PDLIM2-217ENST00000491330 VN1R1Q9GZP7 353 aa15.66■□□□□ 0.1
PDLIM2-217ENST00000491330 ZBTB20Q9HC78 741 aaPredicted RBP15.66■□□□□ 0.1
PDLIM2-217ENST00000491330 OLAHQ9NV23 265 aa15.66■□□□□ 0.1
PDLIM2-217ENST00000491330 CLGNO14967 610 aa15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 STATHP02808 62 aa15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 EDN3P14138 238 aa15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 STX2P32856 288 aa15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 SPRP35270 261 aaPredicted RBP15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 ZNF33BQ06732 778 aa15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 MRPL49Q13405 166 aaKnown RBP15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 RCN2Q14257 317 aa15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 HIST2H2ACQ16777 129 aaPredicted RBP15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 PLAG1Q6DJT9 500 aa15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 HIST2H2AA3Q6FI13 130 aa15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 C3orf62Q6ZUJ4 267 aa15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 TMPRSS11BQ86T26 416 aa15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 CTAGE3PQ8IX95 158 aa15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 CNPY4Q8N129 248 aa15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 C17orf53Q8N3J3 647 aaPredicted RBP15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 SLC5A8Q8N695 610 aa15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 KIF18AQ8NI77 898 aa15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 NT5CQ8TCD5 201 aa15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 TBC1D20Q96BZ9 403 aa15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 SEC16BQ96JE7 1060 aa15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 PITHD1Q9GZP4 211 aaPredicted RBP15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 RNF32Q9H0A6 362 aa15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 KCNK13Q9HB14 408 aa15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 SLC17A6Q9P2U8 582 aa15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 SLC22A14Q9Y267 594 aa15.65■□□□□ 0.1
PDLIM2-217ENST00000491330 MDC1Q14676 2089 aaKnown RBP15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 SYNDIG1LA6NDD5 238 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 NPEPPSL1A6NEC2 478 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 MAGEB17A8MXT2 336 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 CDK2AP1O14519 115 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 LCMT2O60294 686 aaKnown RBP15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 RDH16O75452 317 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 WDR47O94967 919 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 GP5P40197 560 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 PLTPP55058 493 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 OR4D2P58180 307 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 TAS2R39P59534 338 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 TGM3Q08188 693 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 Q0VFX4 171 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 ABRAXAS2Q15018 415 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 PCOLCEQ15113 449 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 DEFB134Q4QY38 66 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 C4orf17Q53FE4 359 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 CDKL4Q5MAI5 379 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 TENM4Q6N022 2769 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 NXPE4Q6UWF7 544 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 RAPH1Q70E73 1250 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 CCDC91Q7Z6B0 441 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 ARHGEF39Q8N4T4 335 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 MMGT1Q8N4V1 131 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 PLPP5Q8NEB5 264 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 M1APQ8TC57 530 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 FBXO25Q8TCJ0 367 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 GRHL3Q8TE85 626 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 NEIL2Q969S2 332 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 PEX11GQ96HA9 241 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 TSNARE1Q96NA8 513 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 PSMG3-AS1Q96PY0 264 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 MACROD1Q9BQ69 325 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 WWOXQ9NZC7 414 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 MTRF1LQ9UGC7 380 aaKnown RBP15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 FER1L5A0AVI2 2057 aa15.64■□□□□ 0.09
PDLIM2-217ENST00000491330 CTAGE15A4D2H0 777 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 OR5H15A6NDH6 313 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 ANKDD1BA6NHY2 528 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 CDC7O00311 574 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 CLDN4O14493 209 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 PRMT3O60678 531 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 GALR3O60755 368 aaPredicted RBP15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 SEC24DO94855 1032 aaPredicted RBP15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 RASAL1O95294 804 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 FHP07954 510 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 SERPINA6P08185 405 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 CTAGE8P0CG41 777 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 C1GALT1C1LP0DN25 315 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 RNH1P13489 461 aaKnown RBP15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 SCTRP47872 440 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 TNFSF10P50591 281 aa15.63■□□□□ 0.09
PDLIM2-217ENST00000491330 RBPJQ06330 500 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms