RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 AGR3Q8TD06 166 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 SLC35F5Q8WV83 523 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 KCTD4Q8WVF5 259 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 FAR1Q8WVX9 515 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 BADQ92934 168 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 NT5C3BQ969T7 300 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 VPS33AQ96AX1 596 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 NACC2Q96BF6 587 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 PPWD1Q96BP3 646 aaKnown RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 TBC1D20Q96BZ9 403 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 P2RY11Q96G91 374 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 REXO5Q96IC2 774 aaKnown RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 TSNARE1Q96NA8 513 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 MUS81Q96NY9 551 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 PGLYRP2Q96PD5 576 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 ASB2Q96Q27 587 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 SERINC2Q96SA4 455 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 SH3GL1Q99961 368 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 ADAM2Q99965 735 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 C17orf80Q9BSJ5 609 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 MLPHQ9BV36 600 aaPredicted RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 OSBPL10Q9BXB5 764 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 VN1R3Q9BXE9 311 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 NFKBIZQ9BYH8 718 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 MAGEB5Q9BZ81 275 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 CLPBQ9H078 707 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 DSN1Q9H410 356 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 GSTO2Q9H4Y5 243 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 DUSP21Q9H596 190 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 DHX35Q9H5Z1 703 aaKnown RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 C11orf49Q9H6J7 331 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 EML4Q9HC35 981 aaKnown RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 NEK6Q9HC98 313 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 CCDC177Q9NQR7 707 aaPredicted RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 NRBP2Q9NSY0 501 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 SACM1LQ9NTJ5 587 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 TMLHEQ9NVH6 421 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 AURKAIP1Q9NWT8 199 aaPredicted RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 MARCH5Q9NX47 278 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 SAGE1Q9NXZ1 904 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 CCDC59Q9P031 241 aaKnown RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 DKK2Q9UBU2 259 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 KLQ9UEF7 1012 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 VPS51Q9UID3 782 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 TLK1Q9UKI8 766 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 FBXO5Q9UKT4 447 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 VANGL2Q9ULK5 521 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 ERVW-1Q9UQF0 538 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 PDE10AQ9Y233 779 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 ACOT9Q9Y305 439 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 MFHAS1Q9Y4C4 1052 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 SNX10Q9Y5X0 201 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 HS3ST4Q9Y661 456 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 HSPE1-MOB4S4R3N1 261 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 MUC22E2RYF6 1773 aaPredicted RBP3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 MYO7AQ13402 2215 aa3.35□□□□□ -1.87
CRNKL1-203ENST00000490258 SYNJ2BP-COX16A0A087WUM0 186 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 A0A0J9YYE9 177 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 SMIM35A0A1B0GVV1 85 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 A0A1W2PP18 115 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 FAM92AA1XBS5 289 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 FAM149AA5PLN7 773 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 ASPDHA6ND91 283 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 AGAP5A6NIR3 686 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 METTL15A6NJ78 407 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 PSMD11O00231 422 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 EEF2KO00418 725 aaKnown RBP3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 UBFD1O14562 309 aaKnown RBP3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 NRP1O14786 923 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 NCAM2O15394 837 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 SLC16A6O15403 523 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 PSMD3O43242 534 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 B4GAT1O43505 415 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 SNX2O60749 519 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 DAB1O75553 588 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 BEST1O76090 585 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 CNTN5O94779 1100 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 INMTO95050 263 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 NADKO95544 446 aaPredicted RBP3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 AGR2O95994 175 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 PEX11BO96011 259 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 CD4P01730 458 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 ABCB1P08183 1280 aaPredicted RBP3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 RBP1P09455 135 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 CLEC2LP0C7M8 214 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 RAP2AP10114 183 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 IL7RP16871 459 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 HOXB8P17481 243 aaPredicted RBP3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 IL1RNP18510 177 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 HDCP19113 662 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 CHRM3P20309 590 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 LMO2P25791 158 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 ELK4P28324 431 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 CST5P28325 142 aaPredicted RBP3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 PKLRP30613 574 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 TGFBR2P37173 567 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 NR4A2P43354 598 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 SLC11A1P49279 550 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 SLC26A2P50443 739 aa3.34□□□□□ -1.87
CRNKL1-203ENST00000490258 SUOXP51687 545 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms