RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 RGS4P49798 205 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 ARL4CP56559 192 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 IL2P60568 153 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 CDKL1Q00532 357 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 GUCY2DQ02846 1103 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 OCA2Q04671 838 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 PDAP1Q13442 181 aaKnown RBP11.14□□□□□ -0.63
SRSF4-204ENST00000489898 EFTUD2Q15029 972 aaKnown RBP eCLIP11.14□□□□□ -0.63
SRSF4-204ENST00000489898 OR4D1Q15615 310 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 AGAP7PQ5VUJ5 663 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 RPUSD3Q6P087 351 aaKnown RBP11.14□□□□□ -0.63
SRSF4-204ENST00000489898 ISLR2Q6UXK2 745 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 LINC00696Q6ZRV3 163 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 ANKRD37Q7Z713 158 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 ZNF227Q86WZ6 799 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 ST6GALNAC3Q8NDV1 305 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 OR51Q1Q8NH59 317 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 MCOLN3Q8TDD5 553 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 GRHL3Q8TE85 626 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 UTP15Q8TED0 518 aaKnown RBP11.14□□□□□ -0.63
SRSF4-204ENST00000489898 SSC4DQ8WTU2 575 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 ANKRD7Q92527 254 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 RERGQ96A58 199 aaPredicted RBP11.14□□□□□ -0.63
SRSF4-204ENST00000489898 RHBDF1Q96CC6 855 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 TSNARE1Q96NA8 513 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 AGAP4Q96P64 663 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 GPR22Q99680 433 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 RNF32Q9H0A6 362 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 ILKAPQ9H0C8 392 aaPredicted RBP11.14□□□□□ -0.63
SRSF4-204ENST00000489898 PCBD2Q9H0N5 130 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 KLHL31Q9H511 634 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 CAB39LQ9H9S4 337 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 RIC8BQ9NVN3 520 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 ARL15Q9NXU5 204 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 MKL2Q9ULH7 1088 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 VPS4AQ9UN37 437 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 NAALAD2Q9Y3Q0 740 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 OARD1Q9Y530 152 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 MYO7BQ6PIF6 2116 aa11.14□□□□□ -0.63
SRSF4-204ENST00000489898 SEC24DO94855 1032 aaPredicted RBP11.13□□□□□ -0.63
SRSF4-204ENST00000489898 C8orf89P0DMQ9 161 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 VARSP26640 1264 aaKnown RBP11.13□□□□□ -0.63
SRSF4-204ENST00000489898 HNRNPH1P31943 449 aaKnown RBP11.13□□□□□ -0.63
SRSF4-204ENST00000489898 KCNC1P48547 511 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 HNRNPFP52597 415 aaKnown RBP11.13□□□□□ -0.63
SRSF4-204ENST00000489898 OLR1P78380 273 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 SRSF11Q05519 484 aaKnown RBP11.13□□□□□ -0.63
SRSF4-204ENST00000489898 ADPRMQ3LIE5 342 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 THEMIS2Q5TEJ8 643 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 PLAG1Q6DJT9 500 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 CAPN13Q6MZZ7 669 aaPredicted RBP11.13□□□□□ -0.63
SRSF4-204ENST00000489898 RIPOR1Q6ZS17 1223 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 CHERPQ8IWX8 916 aaKnown RBP11.13□□□□□ -0.63
SRSF4-204ENST00000489898 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.13□□□□□ -0.63
SRSF4-204ENST00000489898 ZBED8Q8IZ13 594 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 ZADH2Q8N4Q0 377 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 EFCAB3Q8N7B9 438 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 MDS2Q8NDY4 140 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 TMEM52Q8NDY8 209 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 FBXO25Q8TCJ0 367 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 SLC5A11Q8WWX8 675 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 UBXN10Q96LJ8 280 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 RUNDC3BQ96NL0 473 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 LMF1Q96S06 567 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 CYTH2Q99418 400 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 RBBP8Q99708 897 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 ERP44Q9BS26 406 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 UNKQ9C0B0 810 aaKnown RBP11.13□□□□□ -0.63
SRSF4-204ENST00000489898 PHACTR1Q9C0D0 580 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 DPH5Q9H2P9 285 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 POPDC3Q9HBV1 291 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 UTP6Q9NYH9 597 aaKnown RBP11.13□□□□□ -0.63
SRSF4-204ENST00000489898 PLA2G3Q9NZ20 509 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 WHRNQ9P202 907 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 ZFATQ9P243 1243 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 PTGFRNQ9P2B2 879 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 PLEKHB1Q9UF11 243 aaPredicted RBP11.13□□□□□ -0.63
SRSF4-204ENST00000489898 ZNF223Q9UK11 482 aaPredicted RBP11.13□□□□□ -0.63
SRSF4-204ENST00000489898 CDC14AQ9UNH5 594 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 MTO1Q9Y2Z2 717 aaKnown RBP11.13□□□□□ -0.63
SRSF4-204ENST00000489898 ZNF407Q9C0G0 2248 aa11.13□□□□□ -0.63
SRSF4-204ENST00000489898 PHF3Q92576 2039 aaKnown RBP11.13□□□□□ -0.63
SRSF4-204ENST00000489898 TXNDC9O14530 226 aa11.12□□□□□ -0.63
SRSF4-204ENST00000489898 PCDH17O14917 1159 aa11.12□□□□□ -0.63
SRSF4-204ENST00000489898 PRPF4O43172 522 aaKnown RBP eCLIP11.12□□□□□ -0.63
SRSF4-204ENST00000489898 PHGDHO43175 533 aaKnown RBP11.12□□□□□ -0.63
SRSF4-204ENST00000489898 NDUFS4O43181 175 aa11.12□□□□□ -0.63
SRSF4-204ENST00000489898 FAM155BO75949 473 aa11.12□□□□□ -0.63
SRSF4-204ENST00000489898 GUCA1CO95843 209 aa11.12□□□□□ -0.63
SRSF4-204ENST00000489898 WDPCPO95876 746 aa11.12□□□□□ -0.63
SRSF4-204ENST00000489898 F10P00742 488 aa11.12□□□□□ -0.63
SRSF4-204ENST00000489898 ZNF888P0CJ79 500 aaPredicted RBP11.12□□□□□ -0.63
SRSF4-204ENST00000489898 CD1DP15813 335 aa11.12□□□□□ -0.63
SRSF4-204ENST00000489898 MST1P26927 711 aa11.12□□□□□ -0.63
SRSF4-204ENST00000489898 GDF5P43026 501 aa11.12□□□□□ -0.63
SRSF4-204ENST00000489898 CCR8P51685 355 aa11.12□□□□□ -0.63
SRSF4-204ENST00000489898 PWP1Q13610 501 aa11.12□□□□□ -0.63
SRSF4-204ENST00000489898 ZNF468Q5VIY5 522 aaPredicted RBP11.12□□□□□ -0.63
SRSF4-204ENST00000489898 SLCO4C1Q6ZQN7 724 aa11.12□□□□□ -0.63
SRSF4-204ENST00000489898 CAPN12Q6ZSI9 719 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms