RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 OMA1Q96E52 524 aa4.82□□□□□ -1.64
VPS26A-206ENST00000489794 LURAP1Q96LR2 239 aa4.82□□□□□ -1.64
VPS26A-206ENST00000489794 AGAP3Q96P47 875 aa4.82□□□□□ -1.64
VPS26A-206ENST00000489794 ATG101Q9BSB4 218 aa4.82□□□□□ -1.64
VPS26A-206ENST00000489794 ALKBH7Q9BT30 221 aaPredicted RBP4.82□□□□□ -1.64
VPS26A-206ENST00000489794 COPS7BQ9H9Q2 264 aaPredicted RBP4.82□□□□□ -1.64
VPS26A-206ENST00000489794 SPHK2Q9NRA0 654 aa4.82□□□□□ -1.64
VPS26A-206ENST00000489794 PHPT1Q9NRX4 125 aaPredicted RBP4.82□□□□□ -1.64
VPS26A-206ENST00000489794 ARGLU1Q9NWB6 273 aaPredicted RBP4.82□□□□□ -1.64
VPS26A-206ENST00000489794 MPTX1A8MV57 137 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 CLDN1O95832 211 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 ZNF883P0CG24 379 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 SP9P0CG40 484 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 KRT83P78385 493 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 GRB14Q14449 540 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 FASTKD3Q14CZ7 662 aaKnown RBP4.81□□□□□ -1.64
VPS26A-206ENST00000489794 DUSP5Q16690 384 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 TYSND1Q2T9J0 566 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 ANKRD20A4Q4UJ75 823 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 ANKRD20A8PQ5CZ79 823 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 ZNF789Q5FWF6 425 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 ANKRD20A2Q5SQ80 823 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 ANKRD20A1Q5TYW2 823 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 ANKRD20A3Q5VUR7 823 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 KLHL10Q6JEL2 608 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 COX8CQ7Z4L0 72 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 SIAH3Q8IW03 269 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 TMEM99Q8N816 258 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 SGF29Q96ES7 293 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 C2orf48Q96LS8 159 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 PIGQQ9BRB3 760 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 SYT11Q9BT88 431 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 PI4K2AQ9BTU6 479 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 B3GAT2Q9NPZ5 323 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.81□□□□□ -1.64
VPS26A-206ENST00000489794 NDE1Q9NXR1 346 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 DNAJB9Q9UBS3 223 aa4.81□□□□□ -1.64
VPS26A-206ENST00000489794 A0A087WZ39 114 aa4.8□□□□□ -1.64
VPS26A-206ENST00000489794 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.8□□□□□ -1.64
VPS26A-206ENST00000489794 PI4K2BG5E9Z4 385 aa4.8□□□□□ -1.64
VPS26A-206ENST00000489794 H7C423 109 aa4.8□□□□□ -1.64
VPS26A-206ENST00000489794 SAP30O75446 220 aa4.8□□□□□ -1.64
VPS26A-206ENST00000489794 GAS8-AS1O95177 125 aa4.8□□□□□ -1.64
VPS26A-206ENST00000489794 ANKRD34CP0C6C1 535 aa4.8□□□□□ -1.64
VPS26A-206ENST00000489794 UGT1A4P22310 534 aa4.8□□□□□ -1.64
VPS26A-206ENST00000489794 DUTP33316 252 aaKnown RBP4.8□□□□□ -1.64
VPS26A-206ENST00000489794 FRKP42685 505 aaPredicted RBP4.8□□□□□ -1.64
VPS26A-206ENST00000489794 FAM106AQ4KMX7 169 aa4.8□□□□□ -1.64
VPS26A-206ENST00000489794 C14orf177Q52M58 125 aa4.8□□□□□ -1.64
VPS26A-206ENST00000489794 CCDC184Q52MB2 194 aa4.8□□□□□ -1.64
VPS26A-206ENST00000489794 OR4C11Q6IEV9 310 aa4.8□□□□□ -1.64
VPS26A-206ENST00000489794 DHRS11Q6UWP2 260 aa4.8□□□□□ -1.64
VPS26A-206ENST00000489794 Q6ZRP5 223 aa4.8□□□□□ -1.64
VPS26A-206ENST00000489794 C15orf52Q6ZUT6 534 aaKnown RBP4.8□□□□□ -1.64
VPS26A-206ENST00000489794 PIGWQ7Z7B1 504 aa4.8□□□□□ -1.64
VPS26A-206ENST00000489794 HOOK3Q86VS8 718 aa4.8□□□□□ -1.64
VPS26A-206ENST00000489794 AMER3Q8N944 861 aa4.8□□□□□ -1.64
VPS26A-206ENST00000489794 OR7G3Q8NG95 312 aa4.8□□□□□ -1.64
VPS26A-206ENST00000489794 GDAP1Q8TB36 358 aa4.8□□□□□ -1.64
VPS26A-206ENST00000489794 NXPE2Q96DL1 559 aa4.8□□□□□ -1.64
VPS26A-206ENST00000489794 JAKMIP1Q96N16 626 aaKnown RBP4.8□□□□□ -1.64
VPS26A-206ENST00000489794 C17orf62Q9BQA9 187 aa4.8□□□□□ -1.64
VPS26A-206ENST00000489794 OVOL2Q9BRP0 275 aa4.8□□□□□ -1.64
VPS26A-206ENST00000489794 UPF3AQ9H1J1 476 aaKnown RBP4.8□□□□□ -1.64
VPS26A-206ENST00000489794 TMEM161AQ9NX61 479 aa4.8□□□□□ -1.64
VPS26A-206ENST00000489794 POLKQ9UBT6 870 aa4.8□□□□□ -1.64
VPS26A-206ENST00000489794 NOCTQ9UK39 431 aaKnown RBP4.8□□□□□ -1.64
VPS26A-206ENST00000489794 LIPT1Q9Y234 373 aa4.8□□□□□ -1.64
VPS26A-206ENST00000489794 PFASO15067 1338 aa4.79□□□□□ -1.64
VPS26A-206ENST00000489794 A0A0J9YWU9 116 aa4.79□□□□□ -1.64
VPS26A-206ENST00000489794 C2orf92A0A1B0GVN3 265 aa4.79□□□□□ -1.64
VPS26A-206ENST00000489794 PGRMC2O15173 223 aa4.79□□□□□ -1.64
VPS26A-206ENST00000489794 CCND3P30281 292 aaPredicted RBP4.79□□□□□ -1.64
VPS26A-206ENST00000489794 CTNNA1P35221 906 aaKnown RBP4.79□□□□□ -1.64
VPS26A-206ENST00000489794 RPP38P78345 283 aaKnown RBP4.79□□□□□ -1.64
VPS26A-206ENST00000489794 FOLH1Q04609 750 aa4.79□□□□□ -1.64
VPS26A-206ENST00000489794 ZNF542PQ5EBM4 170 aa4.79□□□□□ -1.64
VPS26A-206ENST00000489794 ARMCX4Q5H9R4 360 aa4.79□□□□□ -1.64
VPS26A-206ENST00000489794 CES4AQ5XG92 561 aa4.79□□□□□ -1.64
VPS26A-206ENST00000489794 ZNF497Q6ZNH5 498 aa4.79□□□□□ -1.64
VPS26A-206ENST00000489794 LINC00696Q6ZRV3 163 aa4.79□□□□□ -1.64
VPS26A-206ENST00000489794 STXBP4Q6ZWJ1 553 aa4.79□□□□□ -1.64
VPS26A-206ENST00000489794 CATSPERDQ86XM0 798 aa4.79□□□□□ -1.64
VPS26A-206ENST00000489794 GTF3AQ92664 365 aaKnown RBP4.79□□□□□ -1.64
VPS26A-206ENST00000489794 TEKT1Q969V4 418 aa4.79□□□□□ -1.64
VPS26A-206ENST00000489794 ZNF599Q96NL3 588 aa4.79□□□□□ -1.64
VPS26A-206ENST00000489794 TRIM7Q9C029 511 aa4.79□□□□□ -1.64
VPS26A-206ENST00000489794 TMEM206Q9H813 350 aa4.79□□□□□ -1.64
VPS26A-206ENST00000489794 GPR173Q9NS66 373 aa4.79□□□□□ -1.64
VPS26A-206ENST00000489794 FBXL5Q9UKA1 691 aa4.79□□□□□ -1.64
VPS26A-206ENST00000489794 GMEB2Q9UKD1 530 aa4.79□□□□□ -1.64
VPS26A-206ENST00000489794 GPR132Q9UNW8 380 aa4.79□□□□□ -1.64
VPS26A-206ENST00000489794 ZFP37Q9Y6Q3 630 aaPredicted RBP4.79□□□□□ -1.64
VPS26A-206ENST00000489794 hCG_38984A0A1B0GV85 526 aa4.78□□□□□ -1.64
VPS26A-206ENST00000489794 TCP10L2B9ZVM9 353 aa4.78□□□□□ -1.64
VPS26A-206ENST00000489794 E5RGE8 158 aa4.78□□□□□ -1.64
VPS26A-206ENST00000489794 RNF103O00237 685 aa4.78□□□□□ -1.64
VPS26A-206ENST00000489794 SLC33A1O00400 549 aaPredicted RBP4.78□□□□□ -1.64
VPS26A-206ENST00000489794 TFECO14948 347 aaPredicted RBP4.78□□□□□ -1.64
VPS26A-206ENST00000489794 KIF5CO60282 957 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms