RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	EMP2	P54851	167 aa		10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	MAT1A	Q00266	395 aa	Known RBP	10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	KLRB1	Q12918	225 aa		10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	AIMP2	Q13155	320 aa	Known RBP	10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	SLBP	Q14493	270 aa	Known RBP eCLIP	10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	ACAP2	Q15057	778 aa		10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	PDK4	Q16654	411 aa		10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	ATG9B	Q674R7	924 aa		10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	NIPAL1	Q6NVV3	410 aa		10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	KIRREL2	Q6UWL6	708 aa		10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	SLCO4C1	Q6ZQN7	724 aa		10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	TRMT10C	Q7L0Y3	403 aa	Known RBP	10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	ABHD13	Q7L211	337 aa		10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	PRSS41	Q7RTY9	318 aa		10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	LAPTM4B	Q86VI4	370 aa		10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	ZC3H7A	Q8IWR0	971 aa	Known RBP	10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	CENPL	Q8N0S6	344 aa	Predicted RBP	10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	KRT78	Q8N1N4	520 aa		10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	TTL	Q8NG68	377 aa		10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	OR51Q1	Q8NH59	317 aa		10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	RHEBL1	Q8TAI7	183 aa		10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	UHMK1	Q8TAS1	419 aa	Known RBP	10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	KCTD4	Q8WVF5	259 aa		10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	NXNL1	Q96CM4	212 aa		10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	MOCOS	Q96EN8	888 aa		10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	CD244	Q9BZW8	370 aa		10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	VPS11	Q9H270	941 aa		10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	SPNS1	Q9H2V7	528 aa		10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	ZNF180	Q9UJW8	692 aa		10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	MKL2	Q9ULH7	1088 aa		10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	NAALAD2	Q9Y3Q0	740 aa		10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	ZNF451	Q9Y4E5	1061 aa		10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	GCN1	Q92616	2671 aa	Known RBP	10.51	□□□□□ -0.73
GGA1-222	ENST00000489772	SNRNP200	O75643	2136 aa	Known RBP	10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	HELZ2	Q9BYK8	2649 aa	Known RBP	10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	COL6A6	A6NMZ7	2263 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	EXOC1L	A0A1B0GW35	172 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	URAD	A6NGE7	173 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	POC1B-GALNT4	F8VUJ3	575 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	UBXN8	O00124	270 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	MAP2K7	O14733	419 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	CCNT2	O60583	730 aa	Known RBP	10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	KLHL18	O94889	574 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	BMP10	O95393	424 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	PDGFA	P04085	211 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	SERPINA6	P08185	405 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	ABHD2	P08910	425 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	ALOX12	P18054	663 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	IL10	P22301	178 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	GSTM2	P28161	218 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	CASR	P41180	1078 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	GLRB	P48167	497 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	CSRP3	P50461	194 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	SOX8	P57073	446 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	SNRPN	P63162	240 aa	Known RBP	10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	IRF9	Q00978	393 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	RAPSN	Q13702	412 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	SYT16	Q17RD7	645 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	TUBB8	Q3ZCM7	444 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	MINDY4	Q4G0A6	757 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	FBXO48	Q5FWF7	155 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	XKR6	Q5GH73	641 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	LGSN	Q5TDP6	509 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	VWA5B1	Q5TIE3	1220 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	IRAK1BP1	Q5VVH5	260 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	TMIGD1	Q6UXZ0	262 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	LRRC70	Q7Z2Q7	622 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	PDSS2	Q86YH6	399 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	HPS6	Q86YV9	775 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	AFAP1L2	Q8N4X5	818 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	ANKRD53	Q8N9V6	530 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	OR11G2	Q8NGC1	345 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	ESAM	Q96AP7	390 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	SEC16B	Q96JE7	1060 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	ATOH8	Q96SQ7	321 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	NUDT9	Q9BW91	350 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	PITHD1	Q9GZP4	211 aa	Predicted RBP	10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	EHD1	Q9H4M9	534 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	NT5DC2	Q9H857	520 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	L2HGDH	Q9H9P8	463 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772	HCN3	Q9P1Z3	774 aa		10.5	□□□□□ -0.73
GGA1-222	ENST00000489772		J3QKU1	62 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	GALR3	O60755	368 aa	Predicted RBP	10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	DPM1	O60762	260 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	RDH16	O75452	317 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	HP	P00738	406 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	CYC1	P08574	325 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	ZNF888	P0CJ79	500 aa	Predicted RBP	10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	C8orf89	P0DMQ9	161 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	GFAP	P14136	432 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	ITGA3	P26006	1051 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	HPD	P32754	393 aa	Predicted RBP	10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	HNF4A	P41235	474 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	XCR1	P46094	333 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	STXBP1	P61764	594 aa	Known RBP	10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	MYBPC3	Q14896	1274 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	HIST2H2AC	Q16777	129 aa	Predicted RBP	10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	DEFB134	Q4QY38	66 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	PAGE2B	Q5JRK9	111 aa		10.49	□□□□□ -0.73
GGA1-222	ENST00000489772	MFSD4B	Q5TF39	518 aa		10.49	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms