RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 GK5Q6ZS86 529 aa13.93□□□□□ -0.18
UFD1-209ENST00000489406 KIAA0408Q6ZU52 694 aa13.93□□□□□ -0.18
UFD1-209ENST00000489406 PLEKHM3Q6ZWE6 761 aa13.93□□□□□ -0.18
UFD1-209ENST00000489406 PCGF5Q86SE9 256 aa13.93□□□□□ -0.18
UFD1-209ENST00000489406 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.93□□□□□ -0.18
UFD1-209ENST00000489406 FCRL5Q96RD9 977 aa13.93□□□□□ -0.18
UFD1-209ENST00000489406 APOL2Q9BQE5 337 aa13.93□□□□□ -0.18
UFD1-209ENST00000489406 IL1RL2Q9HB29 575 aa13.93□□□□□ -0.18
UFD1-209ENST00000489406 ZNF701Q9NV72 531 aaPredicted RBP13.93□□□□□ -0.18
UFD1-209ENST00000489406 TENM1Q9UKZ4 2725 aa13.93□□□□□ -0.18
UFD1-209ENST00000489406 DEFB108AA8MXU0 73 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 HCN1O60741 890 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 PHF2O75151 1096 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 EGR1P18146 543 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 THBS2P35442 1172 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 CYLC1P35663 651 aaPredicted RBP13.92□□□□□ -0.18
UFD1-209ENST00000489406 SSR4P51571 173 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 TAS2R40P59535 323 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 NAA25Q14CX7 972 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 KRT31Q15323 416 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 ACSF3Q4G176 576 aaPredicted RBP13.92□□□□□ -0.18
UFD1-209ENST00000489406 TTC23LQ6PF05 361 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 IL20RBQ6UXL0 311 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 PID1Q7Z2X4 250 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 PLD3Q8IV08 490 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 HMGCLL1Q8TB92 370 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 TMEM171Q8WVE6 324 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 RAPGEF5Q92565 580 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 RAD51AP1Q96B01 352 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 PEX11GQ96HA9 241 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 PIGQQ9BRB3 760 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 WDR83Q9BRX9 315 aaKnown RBP13.92□□□□□ -0.18
UFD1-209ENST00000489406 ADAM19Q9H013 955 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 MRPS30Q9NP92 439 aaKnown RBP13.92□□□□□ -0.18
UFD1-209ENST00000489406 LANCL2Q9NS86 450 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 GALNT8Q9NY28 637 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 KLHL8Q9P2G9 620 aaPredicted RBP13.92□□□□□ -0.18
UFD1-209ENST00000489406 NDRG3Q9UGV2 375 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 PCYOX1Q9UHG3 505 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 FBXW2Q9UKT8 454 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 NFS1Q9Y697 457 aa13.92□□□□□ -0.18
UFD1-209ENST00000489406 IGKV1-8A0A0C4DH67 115 aa13.91□□□□□ -0.18
UFD1-209ENST00000489406 TRBV11-1A0A0K0K1C0 115 aa13.91□□□□□ -0.18
UFD1-209ENST00000489406 A8MVJ9 347 aa13.91□□□□□ -0.18
UFD1-209ENST00000489406 APOL1O14791 398 aa13.91□□□□□ -0.18
UFD1-209ENST00000489406 CTIFO43310 598 aaKnown RBP13.91□□□□□ -0.18
UFD1-209ENST00000489406 OR56A5P0C7T3 313 aa13.91□□□□□ -0.18
UFD1-209ENST00000489406 KDELR1P24390 212 aa13.91□□□□□ -0.18
UFD1-209ENST00000489406 CCR7P32248 378 aa13.91□□□□□ -0.18
UFD1-209ENST00000489406 BDKRB1P46663 353 aa13.91□□□□□ -0.18
UFD1-209ENST00000489406 ADARP55265 1226 aaKnown RBP13.91□□□□□ -0.18
UFD1-209ENST00000489406 SLC9A4Q6AI14 798 aa13.91□□□□□ -0.18
UFD1-209ENST00000489406 C12orf54Q6X4T0 127 aa13.91□□□□□ -0.18
UFD1-209ENST00000489406 ZNF571Q7Z3V5 609 aaPredicted RBP13.91□□□□□ -0.18
UFD1-209ENST00000489406 LUZP2Q86TE4 346 aa13.91□□□□□ -0.18
UFD1-209ENST00000489406 LACC1Q8IV20 430 aa13.91□□□□□ -0.18
UFD1-209ENST00000489406 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.91□□□□□ -0.182e-7■■■■■ 278.5
UFD1-209ENST00000489406 RAB42Q8N4Z0 105 aa13.91□□□□□ -0.18
UFD1-209ENST00000489406 NFAM1Q8NET5 270 aaPredicted RBP13.91□□□□□ -0.18
UFD1-209ENST00000489406 ENOX1Q8TC92 643 aaKnown RBP13.91□□□□□ -0.18
UFD1-209ENST00000489406 IGFBPL1Q8WX77 278 aa13.91□□□□□ -0.18
UFD1-209ENST00000489406 SYN2Q92777 582 aaPredicted RBP13.91□□□□□ -0.18
UFD1-209ENST00000489406 DNAJC1Q96KC8 554 aaKnown RBP13.91□□□□□ -0.18
UFD1-209ENST00000489406 FAM173AQ9BQD7 235 aa13.91□□□□□ -0.18
UFD1-209ENST00000489406 HPF1Q9NWY4 346 aa13.91□□□□□ -0.18
UFD1-209ENST00000489406 TESMINQ9Y4I5 508 aa13.91□□□□□ -0.18
UFD1-209ENST00000489406 PCDHGB3Q9Y5G1 929 aa13.91□□□□□ -0.18
UFD1-209ENST00000489406 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.91□□□□□ -0.18
UFD1-209ENST00000489406 SCN3AQ9NY46 2000 aa13.91□□□□□ -0.18
UFD1-209ENST00000489406 DYSFO75923 2080 aa13.91□□□□□ -0.18
UFD1-209ENST00000489406 LRRD1A4D1F6 860 aa13.9□□□□□ -0.18
UFD1-209ENST00000489406 SAGE2PA6NJ88 616 aa13.9□□□□□ -0.18
UFD1-209ENST00000489406 A8MUA0 341 aa13.9□□□□□ -0.18
UFD1-209ENST00000489406 MYO1FO00160 1098 aa13.9□□□□□ -0.18
UFD1-209ENST00000489406 RDH16O75452 317 aa13.9□□□□□ -0.18
UFD1-209ENST00000489406 PKMP14618 531 aaKnown RBP13.9□□□□□ -0.18
UFD1-209ENST00000489406 CNR1P21554 472 aa13.9□□□□□ -0.18
UFD1-209ENST00000489406 CTSSP25774 331 aa13.9□□□□□ -0.18
UFD1-209ENST00000489406 OPRM1P35372 400 aa13.9□□□□□ -0.18
UFD1-209ENST00000489406 CPA2P48052 419 aa13.9□□□□□ -0.18
UFD1-209ENST00000489406 HYAL2Q12891 473 aa13.9□□□□□ -0.18
UFD1-209ENST00000489406 ZNF750Q32MQ0 723 aa13.9□□□□□ -0.18
UFD1-209ENST00000489406 C6orf52Q5T4I8 152 aa13.9□□□□□ -0.18
UFD1-209ENST00000489406 KCTD11Q693B1 232 aa13.9□□□□□ -0.18
UFD1-209ENST00000489406 ZNF567Q8N184 647 aa13.9□□□□□ -0.18
UFD1-209ENST00000489406 PPM1NQ8N819 430 aa13.9□□□□□ -0.18
UFD1-209ENST00000489406 HS3ST6Q96QI5 342 aa13.9□□□□□ -0.18
UFD1-209ENST00000489406 KCNK17Q96T54 332 aa13.9□□□□□ -0.18
UFD1-209ENST00000489406 MACROD1Q9BQ69 325 aa13.9□□□□□ -0.18
UFD1-209ENST00000489406 CXorf56Q9H5V9 222 aa13.9□□□□□ -0.18
UFD1-209ENST00000489406 HAUS4Q9H6D7 363 aa13.9□□□□□ -0.18
UFD1-209ENST00000489406 RAI1Q7Z5J4 1906 aaPredicted RBP13.9□□□□□ -0.18
UFD1-209ENST00000489406 NBEAL2Q6ZNJ1 2754 aa13.89□□□□□ -0.19
UFD1-209ENST00000489406 SERINC4A6NH21 518 aa13.89□□□□□ -0.19
UFD1-209ENST00000489406 OR6B1O95007 311 aa13.89□□□□□ -0.19
UFD1-209ENST00000489406 TPM2P07951 284 aa13.89□□□□□ -0.19
UFD1-209ENST00000489406 DNASE1L1P49184 302 aa13.89□□□□□ -0.19
UFD1-209ENST00000489406 DYNLT1P63172 113 aa13.89□□□□□ -0.19
UFD1-209ENST00000489406 FOXO1Q12778 655 aa13.89□□□□□ -0.19
UFD1-209ENST00000489406 MSLNQ13421 630 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms