RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 STK16O75716 305 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 HPP00738 406 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 LTA4HP09960 611 aaKnown RBP12.79□□□□□ -0.36
LMO4-203ENST00000489303 TFEBP19484 476 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 GDF5P43026 501 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 SCTRP47872 440 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 SLC6A12P48065 614 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 MAT1AQ00266 395 aaKnown RBP12.79□□□□□ -0.36
LMO4-203ENST00000489303 REEP5Q00765 189 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 CDC16Q13042 620 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 EFTUD2Q15029 972 aaKnown RBP eCLIP12.79□□□□□ -0.36
LMO4-203ENST00000489303 SYT16Q17RD7 645 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 ABHD13Q7L211 337 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 TAOK1Q7L7X3 1001 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 CMC1Q7Z7K0 106 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 LAPTM4BQ86VI4 370 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 IFT20Q8IY31 132 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 KLHDC8AQ8IYD2 350 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 ZADH2Q8N4Q0 377 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 SNX31Q8N9S9 440 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 KCT2Q8NC54 265 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 TTLQ8NG68 377 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 OR11G2Q8NGC1 345 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 NT5CQ8TCD5 201 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 EXT2Q93063 718 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 PSMG3-AS1Q96PY0 264 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 LHPPQ9H008 270 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 ACSS3Q9H6R3 686 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 PRM3Q9NNZ6 103 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 DNAJC11Q9NVH1 559 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 C19orf25Q9UFG5 118 aaPredicted RBP12.79□□□□□ -0.36
LMO4-203ENST00000489303 MKL2Q9ULH7 1088 aa12.79□□□□□ -0.36
LMO4-203ENST00000489303 SYCE1LA8MT33 242 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 ALOX12BO75342 701 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 KLHL18O94889 574 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 BMP10O95393 424 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 ACSL3O95573 720 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 UQCRHP07919 91 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 INHBAP08476 426 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 CYC1P08574 325 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 SLC35E2BP0CK96 405 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 C1GALT1C1LP0DN25 315 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 ALOX12P18054 663 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 IL10P22301 178 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 GSTM2P28161 218 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 HPDP32754 393 aaPredicted RBP12.78□□□□□ -0.36
LMO4-203ENST00000489303 GGT5P36269 586 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 XCR1P46094 333 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 AP2B1P63010 937 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 OR4D1Q15615 310 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 FAM83EQ2M2I3 478 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 MINDY4Q4G0A6 757 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 MROH9Q5TGP6 573 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 AGAP7PQ5VUJ5 663 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 ATG9BQ674R7 924 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 FAAH2Q6GMR7 532 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 KLC3Q6P597 504 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 NDUFAF7Q7L592 441 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 ZC3H7AQ8IWR0 971 aaKnown RBP12.78□□□□□ -0.36
LMO4-203ENST00000489303 PARP9Q8IXQ6 854 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 FAM26EQ8N5C1 309 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 EFCAB3Q8N7B9 438 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 ZNF740Q8NDX6 193 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 OR51Q1Q8NH59 317 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 C8orf44Q96CB5 159 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 THOC3Q96J01 351 aaKnown RBP12.78□□□□□ -0.36
LMO4-203ENST00000489303 AGAP4Q96P64 663 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 MFRPQ9BY79 579 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 PITHD1Q9GZP4 211 aaPredicted RBP12.78□□□□□ -0.36
LMO4-203ENST00000489303 CDC42EP4Q9H3Q1 356 aaKnown RBP12.78□□□□□ -0.36
LMO4-203ENST00000489303 ALG9Q9H6U8 611 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 ZNF552Q9H707 407 aaPredicted RBP12.78□□□□□ -0.36
LMO4-203ENST00000489303 ZNF160Q9HCG1 818 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 SLAMF7Q9NQ25 335 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 RIC8BQ9NVN3 520 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 NUDT4Q9NZJ9 180 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 HCN3Q9P1Z3 774 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 NAALAD2Q9Y3Q0 740 aa12.78□□□□□ -0.36
LMO4-203ENST00000489303 FER1L5A0AVI2 2057 aa12.77□□□□□ -0.36
LMO4-203ENST00000489303 CCDC189A1A4V9 331 aa12.77□□□□□ -0.37
LMO4-203ENST00000489303 SUPT3HB4E1H0 165 aa12.77□□□□□ -0.37
LMO4-203ENST00000489303 CCNT2O60583 730 aaKnown RBP12.77□□□□□ -0.37
LMO4-203ENST00000489303 RDH16O75452 317 aa12.77□□□□□ -0.37
LMO4-203ENST00000489303 SUPT3HO75486 399 aa12.77□□□□□ -0.37
LMO4-203ENST00000489303 C8orf89P0DMQ9 161 aa12.77□□□□□ -0.37
LMO4-203ENST00000489303 GP1BBP13224 206 aa12.77□□□□□ -0.37
LMO4-203ENST00000489303 ICAM2P13598 275 aa12.77□□□□□ -0.37
LMO4-203ENST00000489303 VARSP26640 1264 aaKnown RBP12.77□□□□□ -0.37
LMO4-203ENST00000489303 TYK2P29597 1187 aa12.77□□□□□ -0.37
LMO4-203ENST00000489303 HSPA7P48741 367 aa12.77□□□□□ -0.37
LMO4-203ENST00000489303 SERPINB8P50452 374 aa12.77□□□□□ -0.37
LMO4-203ENST00000489303 STXBP1P61764 594 aaKnown RBP12.77□□□□□ -0.37
LMO4-203ENST00000489303 BMPR2Q13873 1038 aa12.77□□□□□ -0.37
LMO4-203ENST00000489303 SLBPQ14493 270 aaKnown RBP eCLIP12.77□□□□□ -0.37
LMO4-203ENST00000489303 PDK4Q16654 411 aa12.77□□□□□ -0.37
LMO4-203ENST00000489303 HIST2H2ACQ16777 129 aaPredicted RBP12.77□□□□□ -0.37
LMO4-203ENST00000489303 C18orf21Q32NC0 220 aaPredicted RBP12.77□□□□□ -0.37
LMO4-203ENST00000489303 HIST2H2AA3Q6FI13 130 aa12.77□□□□□ -0.37
LMO4-203ENST00000489303 JMJD6Q6NYC1 403 aaPredicted RBP12.77□□□□□ -0.37
LMO4-203ENST00000489303 TMIGD1Q6UXZ0 262 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms