RNA–Protein interactions for RNA: ENST00000489240.1

C9orf16-203, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 3

Gene C9orf16, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-203ENST00000489240 SEC22BO75396 215 aa17.39■□□□□ 0.37
C9orf16-203ENST00000489240 PRR35P0CG20 571 aa17.39■□□□□ 0.37
C9orf16-203ENST00000489240 ARF3P61204 181 aaPredicted RBP17.39■□□□□ 0.37
C9orf16-203ENST00000489240 STXBP1P61764 594 aaKnown RBP17.39■□□□□ 0.37
C9orf16-203ENST00000489240 MAD2L1Q13257 205 aaPredicted RBP17.39■□□□□ 0.37
C9orf16-203ENST00000489240 AP5B1Q2VPB7 878 aa17.39■□□□□ 0.37
C9orf16-203ENST00000489240 TMEM35AQ53FP2 167 aa17.39■□□□□ 0.37
C9orf16-203ENST00000489240 C6orf136Q5SQH8 315 aa17.39■□□□□ 0.37
C9orf16-203ENST00000489240 MANEAQ5SRI9 462 aa17.39■□□□□ 0.37
C9orf16-203ENST00000489240 DEPDC1Q5TB30 811 aa17.39■□□□□ 0.37
C9orf16-203ENST00000489240 KHDRBS2Q5VWX1 349 aaKnown RBP17.39■□□□□ 0.37
C9orf16-203ENST00000489240 FRMPD2BQ6IN97 320 aa17.39■□□□□ 0.37
C9orf16-203ENST00000489240 OGFOD2Q6N063 350 aa17.39■□□□□ 0.37
C9orf16-203ENST00000489240 VN1R4Q7Z5H5 301 aa17.39■□□□□ 0.37
C9orf16-203ENST00000489240 SPATA19Q7Z5L4 167 aa17.39■□□□□ 0.37
C9orf16-203ENST00000489240 ZFAND4Q86XD8 727 aa17.39■□□□□ 0.37
C9orf16-203ENST00000489240 PARP9Q8IXQ6 854 aa17.39■□□□□ 0.37
C9orf16-203ENST00000489240 D2HGDHQ8N465 521 aa17.39■□□□□ 0.37
C9orf16-203ENST00000489240 NETO1Q8TDF5 533 aa17.39■□□□□ 0.37
C9orf16-203ENST00000489240 N4BP2L2Q92802 583 aaPredicted RBP17.39■□□□□ 0.37
C9orf16-203ENST00000489240 CCDC74BQ96LY2 380 aa17.39■□□□□ 0.37
C9orf16-203ENST00000489240 TMEM74Q96NL1 305 aa17.39■□□□□ 0.37
C9orf16-203ENST00000489240 FCRL4Q96PJ5 515 aa17.39■□□□□ 0.37
C9orf16-203ENST00000489240 AHSPQ9NZD4 102 aa17.39■□□□□ 0.37
C9orf16-203ENST00000489240 LOC105369274A0A096LPK9 316 aa17.38■□□□□ 0.37
C9orf16-203ENST00000489240 LOC102723532A0A0G2JNH3 316 aa17.38■□□□□ 0.37
C9orf16-203ENST00000489240 URADA6NGE7 173 aa17.38■□□□□ 0.37
C9orf16-203ENST00000489240 SEMA3DO95025 777 aa17.38■□□□□ 0.37
C9orf16-203ENST00000489240 MSL3P1P0C860 447 aa17.38■□□□□ 0.37
C9orf16-203ENST00000489240 GABRA4P48169 554 aa17.38■□□□□ 0.37
C9orf16-203ENST00000489240 RAP1GDS1P52306 607 aa17.38■□□□□ 0.37
C9orf16-203ENST00000489240 ARFIP1P53367 373 aa17.38■□□□□ 0.37
C9orf16-203ENST00000489240 VSX2P58304 361 aaPredicted RBP17.38■□□□□ 0.37
C9orf16-203ENST00000489240 ERVK-8P63133 956 aa17.38■□□□□ 0.37
C9orf16-203ENST00000489240 EMX2Q04743 252 aa17.38■□□□□ 0.37
C9orf16-203ENST00000489240 TUBB3Q13509 450 aa17.38■□□□□ 0.37
C9orf16-203ENST00000489240 TERF2Q15554 542 aa17.38■□□□□ 0.37
C9orf16-203ENST00000489240 SPIN4Q56A73 249 aa17.38■□□□□ 0.37
C9orf16-203ENST00000489240 PHF19Q5T6S3 580 aa17.38■□□□□ 0.37
C9orf16-203ENST00000489240 RBM44Q6ZP01 1051 aaKnown RBP17.38■□□□□ 0.37
C9orf16-203ENST00000489240 SLITRK4Q8IW52 837 aa17.38■□□□□ 0.37
C9orf16-203ENST00000489240 OR4N4Q8N0Y3 316 aa17.38■□□□□ 0.37
C9orf16-203ENST00000489240 SRFBP1Q8NEF9 429 aaKnown RBP17.38■□□□□ 0.37
C9orf16-203ENST00000489240 RGMAQ96B86 450 aa17.38■□□□□ 0.37
C9orf16-203ENST00000489240 SLC6A16Q9GZN6 736 aa17.38■□□□□ 0.37
C9orf16-203ENST00000489240 OR51B5Q9H339 312 aa17.38■□□□□ 0.37
C9orf16-203ENST00000489240 HEY2Q9UBP5 337 aa17.38■□□□□ 0.37
C9orf16-203ENST00000489240 TMED5Q9Y3A6 229 aa17.38■□□□□ 0.37
C9orf16-203ENST00000489240 LRIT2A6NDA9 550 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 E9PBE3 544 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 UBDO15205 165 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 ZSCAN9O15535 394 aaPredicted RBP17.37■□□□□ 0.37
C9orf16-203ENST00000489240 KLHL41O60662 606 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 SH3BGRLO75368 114 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 DCTN3O75935 186 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 MYO1DO94832 1006 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 ETHE1O95571 254 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 EIF2S1P05198 315 aaKnown RBP17.37■□□□□ 0.37
C9orf16-203ENST00000489240 CSRP1P21291 193 aaKnown RBP17.37■□□□□ 0.37
C9orf16-203ENST00000489240 MAPK1P28482 360 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 IRX1P78414 480 aaPredicted RBP17.37■□□□□ 0.37
C9orf16-203ENST00000489240 TGM3Q08188 693 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 ACSM2AQ08AH3 577 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 DEFB110Q30KQ9 67 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 ADPRMQ3LIE5 342 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 CCDC157Q569K6 752 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 TOR1AIP1Q5JTV8 583 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 TCTE1Q5JU00 501 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 ACSM2BQ68CK6 577 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 CSNK1A1LQ8N752 337 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 FNDC5Q8NAU1 212 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 DEFB124Q8NES8 71 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 CHTF18Q8WVB6 975 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 F2RL3Q96RI0 385 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 MRPL1Q9BYD6 325 aaKnown RBP17.37■□□□□ 0.37
C9orf16-203ENST00000489240 REXO4Q9GZR2 422 aaKnown RBP17.37■□□□□ 0.37
C9orf16-203ENST00000489240 SYNPO2LQ9H987 977 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 FANCEQ9HB96 536 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 GIMAP2Q9UG22 337 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 RUVBL1Q9Y265 456 aaKnown RBP17.37■□□□□ 0.37
C9orf16-203ENST00000489240 FRYLO94915 3013 aa17.37■□□□□ 0.37
C9orf16-203ENST00000489240 PCNX2A6NKB5 2137 aa17.36■□□□□ 0.37
C9orf16-203ENST00000489240 TMX2-CTNND1H3BSU7 103 aa17.36■□□□□ 0.37
C9orf16-203ENST00000489240 GFRA3O60609 400 aa17.36■□□□□ 0.37
C9orf16-203ENST00000489240 CCDC22O60826 627 aa17.36■□□□□ 0.37
C9orf16-203ENST00000489240 TBX6O95947 436 aaPredicted RBP17.36■□□□□ 0.37
C9orf16-203ENST00000489240 PCSK2P16519 638 aa17.36■□□□□ 0.37
C9orf16-203ENST00000489240 NCF2P19878 526 aaPredicted RBP17.36■□□□□ 0.37
C9orf16-203ENST00000489240 HNRNPH1P31943 449 aaKnown RBP17.36■□□□□ 0.37
C9orf16-203ENST00000489240 RPL38P63173 70 aaKnown RBP17.36■□□□□ 0.37
C9orf16-203ENST00000489240 ACY1Q03154 408 aa17.36■□□□□ 0.37
C9orf16-203ENST00000489240 ZFP36L1Q07352 338 aaKnown RBP17.36■□□□□ 0.37
C9orf16-203ENST00000489240 TBL3Q12788 808 aaKnown RBP17.36■□□□□ 0.37
C9orf16-203ENST00000489240 HYAL2Q12891 473 aa17.36■□□□□ 0.37
C9orf16-203ENST00000489240 WASHC2DQ5SRD0 308 aa17.36■□□□□ 0.37
C9orf16-203ENST00000489240 TRIM40Q6P9F5 258 aa17.36■□□□□ 0.37
C9orf16-203ENST00000489240 CYB5D1Q6P9G0 228 aa17.36■□□□□ 0.37
C9orf16-203ENST00000489240 PAGE2Q7Z2X7 111 aa17.36■□□□□ 0.37
C9orf16-203ENST00000489240 KIAA2013Q8IYS2 634 aa17.36■□□□□ 0.37
C9orf16-203ENST00000489240 METTL4Q8N3J2 472 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms