RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 ZNF860A6NHJ4 632 aa23.62■■□□□ 1.37
HMGN1-217ENST00000489072 NCF1BA6NI72 391 aaPredicted RBP23.62■■□□□ 1.37
HMGN1-217ENST00000489072 NCF1CA8MVU1 366 aaPredicted RBP23.62■■□□□ 1.37
HMGN1-217ENST00000489072 SERPIND1P05546 499 aa23.62■■□□□ 1.37
HMGN1-217ENST00000489072 CELA2AP08217 269 aa23.62■■□□□ 1.37
HMGN1-217ENST00000489072 NCF1P14598 390 aaPredicted RBP23.62■■□□□ 1.37
HMGN1-217ENST00000489072 VARSP26640 1264 aaKnown RBP23.62■■□□□ 1.37
HMGN1-217ENST00000489072 STX2P32856 288 aa23.62■■□□□ 1.37
HMGN1-217ENST00000489072 SPRP35270 261 aaPredicted RBP23.62■■□□□ 1.37
HMGN1-217ENST00000489072 UQCRFS1P47985 274 aa23.62■■□□□ 1.37
HMGN1-217ENST00000489072 PCOLCEQ15113 449 aa23.62■■□□□ 1.37
HMGN1-217ENST00000489072 OR4D1Q15615 310 aa23.62■■□□□ 1.37
HMGN1-217ENST00000489072 Q6ZS92 163 aa23.62■■□□□ 1.37
HMGN1-217ENST00000489072 TBC1D19Q8N5T2 526 aa23.62■■□□□ 1.37
HMGN1-217ENST00000489072 NT5CQ8TCD5 201 aa23.62■■□□□ 1.37
HMGN1-217ENST00000489072 UBXN10Q96LJ8 280 aa23.62■■□□□ 1.37
HMGN1-217ENST00000489072 TMEM79Q9BSE2 394 aa23.62■■□□□ 1.37
HMGN1-217ENST00000489072 ZNF700Q9H0M5 742 aa23.62■■□□□ 1.37
HMGN1-217ENST00000489072 PCDH17O14917 1159 aa23.61■■□□□ 1.37
HMGN1-217ENST00000489072 TAPBPO15533 448 aa23.61■■□□□ 1.37
HMGN1-217ENST00000489072 WDR47O94967 919 aa23.61■■□□□ 1.37
HMGN1-217ENST00000489072 B3GALT4O96024 378 aa23.61■■□□□ 1.37
HMGN1-217ENST00000489072 PRR35P0CG20 571 aa23.61■■□□□ 1.37
HMGN1-217ENST00000489072 AHRP35869 848 aa23.61■■□□□ 1.37
HMGN1-217ENST00000489072 RAB10P61026 200 aa23.61■■□□□ 1.37
HMGN1-217ENST00000489072 SRSF1Q07955 248 aaKnown RBP eCLIP23.61■■□□□ 1.37
HMGN1-217ENST00000489072 MINDY4Q4G0A6 757 aa23.61■■□□□ 1.37
HMGN1-217ENST00000489072 LANCL3Q6ZV70 420 aa23.61■■□□□ 1.37
HMGN1-217ENST00000489072 CMC1Q7Z7K0 106 aa23.61■■□□□ 1.37
HMGN1-217ENST00000489072 CUZD1Q86UP6 607 aa23.61■■□□□ 1.37
HMGN1-217ENST00000489072 KBTBD2Q8IY47 623 aa23.61■■□□□ 1.37
HMGN1-217ENST00000489072 GALNT11Q8NCW6 608 aa23.61■■□□□ 1.37
HMGN1-217ENST00000489072 OR5T3Q8NGG3 340 aa23.61■■□□□ 1.37
HMGN1-217ENST00000489072 PSMF1Q92530 271 aa23.61■■□□□ 1.37
HMGN1-217ENST00000489072 ZNF592Q92610 1267 aa23.61■■□□□ 1.37
HMGN1-217ENST00000489072 C19orf60Q96EN9 201 aa23.61■■□□□ 1.37
HMGN1-217ENST00000489072 WDR77Q9BQA1 342 aaPredicted RBP23.61■■□□□ 1.37
HMGN1-217ENST00000489072 AIF1LQ9BQI0 150 aa23.61■■□□□ 1.37
HMGN1-217ENST00000489072 CLEC18AA5D8T8 446 aa23.6■■□□□ 1.37
HMGN1-217ENST00000489072 GALR3O60755 368 aaPredicted RBP23.6■■□□□ 1.37
HMGN1-217ENST00000489072 DNAJB6O75190 326 aa23.6■■□□□ 1.37
HMGN1-217ENST00000489072 C8orf89P0DMQ9 161 aa23.6■■□□□ 1.37
HMGN1-217ENST00000489072 ATP6V0D1P61421 351 aa23.6■■□□□ 1.37
HMGN1-217ENST00000489072 HYAL2Q12891 473 aa23.6■■□□□ 1.37
HMGN1-217ENST00000489072 HERC3Q15034 1050 aa23.6■■□□□ 1.37
HMGN1-217ENST00000489072 FBXO48Q5FWF7 155 aa23.6■■□□□ 1.37
HMGN1-217ENST00000489072 UBAP2Q5T6F2 1119 aaKnown RBP23.6■■□□□ 1.37
HMGN1-217ENST00000489072 MFSD4BQ5TF39 518 aa23.6■■□□□ 1.37
HMGN1-217ENST00000489072 CLEC18BQ6UXF7 455 aa23.6■■□□□ 1.37
HMGN1-217ENST00000489072 SLCO4C1Q6ZQN7 724 aa23.6■■□□□ 1.37
HMGN1-217ENST00000489072 GPSM1Q86YR5 675 aa23.6■■□□□ 1.37
HMGN1-217ENST00000489072 IQCKQ8N0W5 287 aa23.6■■□□□ 1.37
HMGN1-217ENST00000489072 CLEC18CQ8NCF0 446 aa23.6■■□□□ 1.37
HMGN1-217ENST00000489072 CYTH2Q99418 400 aa23.6■■□□□ 1.37
HMGN1-217ENST00000489072 ILKAPQ9H0C8 392 aaPredicted RBP23.6■■□□□ 1.37
HMGN1-217ENST00000489072 RIC8BQ9NVN3 520 aa23.6■■□□□ 1.37
HMGN1-217ENST00000489072 VPS4BO75351 444 aa23.59■■□□□ 1.37
HMGN1-217ENST00000489072 SERPINA7P05543 415 aa23.59■■□□□ 1.37
HMGN1-217ENST00000489072 ZNF888P0CJ79 500 aaPredicted RBP23.59■■□□□ 1.37
HMGN1-217ENST00000489072 SLC35E2BP0CK96 405 aa23.59■■□□□ 1.37
HMGN1-217ENST00000489072 ALOX12P18054 663 aa23.59■■□□□ 1.37
HMGN1-217ENST00000489072 GNLYP22749 145 aa23.59■■□□□ 1.37
HMGN1-217ENST00000489072 RGS1Q08116 209 aa23.59■■□□□ 1.37
HMGN1-217ENST00000489072 DLG1Q12959 904 aa23.59■■□□□ 1.37
HMGN1-217ENST00000489072 NAB1Q13506 487 aa23.59■■□□□ 1.37
HMGN1-217ENST00000489072 SLMAPQ14BN4 828 aa23.59■■□□□ 1.37
HMGN1-217ENST00000489072 RBBP5Q15291 538 aaKnown RBP23.59■■□□□ 1.37
HMGN1-217ENST00000489072 DEFB134Q4QY38 66 aa23.59■■□□□ 1.37
HMGN1-217ENST00000489072 CRB2Q5IJ48 1285 aa23.59■■□□□ 1.37
HMGN1-217ENST00000489072 ISLR2Q6UXK2 745 aa23.59■■□□□ 1.37
HMGN1-217ENST00000489072 LINC00696Q6ZRV3 163 aa23.59■■□□□ 1.37
HMGN1-217ENST00000489072 MMGT1Q8N4V1 131 aa23.59■■□□□ 1.37
HMGN1-217ENST00000489072 NOA1Q8NC60 698 aaKnown RBP23.59■■□□□ 1.37
HMGN1-217ENST00000489072 BRIX1Q8TDN6 353 aaKnown RBP23.59■■□□□ 1.37
HMGN1-217ENST00000489072 PPP4R1Q8TF05 950 aa23.59■■□□□ 1.37
HMGN1-217ENST00000489072 SNRNP40Q96DI7 357 aaKnown RBP23.59■■□□□ 1.37
HMGN1-217ENST00000489072 PEX11GQ96HA9 241 aa23.59■■□□□ 1.37
HMGN1-217ENST00000489072 IMMP1LQ96LU5 166 aa23.59■■□□□ 1.37
HMGN1-217ENST00000489072 RBCK1Q9BYM8 510 aa23.59■■□□□ 1.37
HMGN1-217ENST00000489072 SLC6A16Q9GZN6 736 aa23.59■■□□□ 1.37
HMGN1-217ENST00000489072 AICDAQ9GZX7 198 aa23.59■■□□□ 1.37
HMGN1-217ENST00000489072 DMGDHQ9UI17 866 aaKnown RBP23.59■■□□□ 1.37
HMGN1-217ENST00000489072 VPS4AQ9UN37 437 aa23.59■■□□□ 1.37
HMGN1-217ENST00000489072 PCDHGA10Q9Y5H3 936 aa23.59■■□□□ 1.37
HMGN1-217ENST00000489072 CPAMD8Q8IZJ3 1885 aa23.59■■□□□ 1.37
HMGN1-217ENST00000489072 USP9YO00507 2555 aaPredicted RBP23.59■■□□□ 1.37
HMGN1-217ENST00000489072 HIVEP3Q5T1R4 2406 aa23.59■■□□□ 1.37
HMGN1-217ENST00000489072 IGHV3-20A0A0C4DH32 117 aa23.58■■□□□ 1.37
HMGN1-217ENST00000489072 CYC1P08574 325 aa23.58■■□□□ 1.37
HMGN1-217ENST00000489072 C1GALT1C1LP0DN25 315 aa23.58■■□□□ 1.37
HMGN1-217ENST00000489072 GNAZP19086 355 aa23.58■■□□□ 1.37
HMGN1-217ENST00000489072 SOX11P35716 441 aa23.58■■□□□ 1.37
HMGN1-217ENST00000489072 GGT5P36269 586 aa23.58■■□□□ 1.37
HMGN1-217ENST00000489072 KCNC1P48547 511 aa23.58■■□□□ 1.37
HMGN1-217ENST00000489072 OLR1P78380 273 aa23.58■■□□□ 1.37
HMGN1-217ENST00000489072 CDC16Q13042 620 aa23.58■■□□□ 1.37
HMGN1-217ENST00000489072 MFAP5Q13361 173 aa23.58■■□□□ 1.37
HMGN1-217ENST00000489072 CISD2Q8N5K1 135 aaKnown RBP23.58■■□□□ 1.37
HMGN1-217ENST00000489072 UTP15Q8TED0 518 aaKnown RBP23.58■■□□□ 1.37
HMGN1-217ENST00000489072 CREB3L4Q8TEY5 395 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms