RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 LRR1Q96L50 414 aa3.19□□□□□ -1.9
PRPF4-203ENST00000488937 CASD1Q96PB1 797 aa3.19□□□□□ -1.9
PRPF4-203ENST00000488937 FCRL5Q96RD9 977 aa3.19□□□□□ -1.9
PRPF4-203ENST00000488937 AIFM2Q9BRQ8 373 aa3.19□□□□□ -1.9
PRPF4-203ENST00000488937 MSTO1Q9BUK6 570 aa3.19□□□□□ -1.9
PRPF4-203ENST00000488937 FNDC11Q9BVV2 318 aa3.19□□□□□ -1.9
PRPF4-203ENST00000488937 IDI2Q9BXS1 227 aa3.19□□□□□ -1.9
PRPF4-203ENST00000488937 SLC2A11Q9BYW1 496 aa3.19□□□□□ -1.9
PRPF4-203ENST00000488937 LRRCC1Q9C099 1032 aa3.19□□□□□ -1.9
PRPF4-203ENST00000488937 SLC39A8Q9C0K1 460 aa3.19□□□□□ -1.9
PRPF4-203ENST00000488937 TDRD3Q9H7E2 651 aaKnown RBP3.19□□□□□ -1.9
PRPF4-203ENST00000488937 RNF146Q9NTX7 359 aa3.19□□□□□ -1.9
PRPF4-203ENST00000488937 GTSE1Q9NYZ3 720 aa3.19□□□□□ -1.9
PRPF4-203ENST00000488937 NDUFA13Q9P0J0 144 aa3.19□□□□□ -1.9
PRPF4-203ENST00000488937 KIAA1257Q9ULG3 409 aa3.19□□□□□ -1.9
PRPF4-203ENST00000488937 TNNQ9UQP3 1299 aa3.19□□□□□ -1.9
PRPF4-203ENST00000488937 COMMD3-BMI1R4GMX3 469 aa3.19□□□□□ -1.9
PRPF4-203ENST00000488937 PARD3Q8TEW0 1356 aa3.19□□□□□ -1.9
PRPF4-203ENST00000488937 KIF7Q2M1P5 1343 aa3.19□□□□□ -1.9
PRPF4-203ENST00000488937 A0A1B0GTQ1 180 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 PRSS51A0A1B0GVH4 220 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 OR2M5A3KFT3 312 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 CASTOR2A6NHX0 329 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 ANKRD30BLA7E2S9 258 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 ANKRD66B4E2M5 251 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 F8VVB4 439 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 F8VWA3 439 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 F8W810 466 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 MS4A18H0YCH9 400 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 H7C1Q1 480 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 KCNN4O15554 427 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 ATP6V1G1O75348 118 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 WDPCPO95876 746 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 EGFP01133 1207 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 MMP3P08254 477 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 SERPINF2P08697 491 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 NUDT17P0C025 328 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 ELFN1P0C7U0 828 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 UBTFL6P0CB48 400 aaPredicted RBP3.18□□□□□ -1.9
PRPF4-203ENST00000488937 RRASP10301 218 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 TFPIP10646 304 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 RALBP11234 206 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 F3P13726 295 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 MYL6BP14649 208 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 ST6GAL1P15907 406 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 HOXA7P31268 230 aaPredicted RBP3.18□□□□□ -1.9
PRPF4-203ENST00000488937 PRDX2P32119 198 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 ARRB2P32121 409 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 EIF2S3P41091 472 aaKnown RBP3.18□□□□□ -1.9
PRPF4-203ENST00000488937 FOLR3P41439 243 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 SLC6A8P48029 635 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 SLC11A1P49279 550 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 CEBPDP49716 269 aaPredicted RBP3.18□□□□□ -1.9
PRPF4-203ENST00000488937 TNFSF10P50591 281 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 PPT1P50897 306 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 CCT8P50990 548 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 MMP15P51511 669 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 CSNK2A1P68400 391 aaPredicted RBP3.18□□□□□ -1.9
PRPF4-203ENST00000488937 CBX1P83916 185 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 CSTF1Q05048 431 aaKnown RBP3.18□□□□□ -1.9
PRPF4-203ENST00000488937 IL10RBQ08334 325 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 ZBTB17Q13105 803 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 SELPLGQ14242 412 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 RFTN1Q14699 578 aaPredicted RBP3.18□□□□□ -1.9
PRPF4-203ENST00000488937 ZNF169Q14929 603 aaPredicted RBP3.18□□□□□ -1.9
PRPF4-203ENST00000488937 EIF2S3LQ2VIR3 472 aaKnown RBP3.18□□□□□ -1.9
PRPF4-203ENST00000488937 KRTAP27-1Q3LI81 207 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 LRIT3Q3SXY7 679 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 PDLIM3Q53GG5 364 aaPredicted RBP3.18□□□□□ -1.9
PRPF4-203ENST00000488937 XKR3Q5GH77 459 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 TAF3Q5VWG9 929 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 IL23RQ5VWK5 629 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 RGMBQ6NW40 437 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 NIPAL3Q6P499 406 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 KLC3Q6P597 504 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 TMEM65Q6PI78 240 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 PLXDC2Q6UX71 529 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 ZNF813Q6ZN06 617 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 CDHR3Q6ZTQ4 885 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 IL17RELQ6ZVW7 336 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 CYB5R4Q7L1T6 521 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 AMIGO1Q86WK6 493 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 FAM131BQ86XD5 332 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 SLC44A3Q8N4M1 653 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 CSNK2A3Q8NEV1 391 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 CMASQ8NFW8 434 aaPredicted RBP3.18□□□□□ -1.9
PRPF4-203ENST00000488937 SLC2A14Q8TDB8 520 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 SSMEM1Q8WWF3 244 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 STARD8Q92502 1023 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 FCGR1BQ92637 280 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 KAT2BQ92831 832 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 MCHR2Q969V1 340 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 TMIGD2Q96BF3 282 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 DHX58Q96C10 678 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 ULK4Q96C45 1275 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 PDLIM2Q96JY6 352 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 FAM81BQ96LP2 452 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 GPR137Q96N19 417 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 TSSK2Q96PF2 358 aa3.18□□□□□ -1.9
PRPF4-203ENST00000488937 RAB40CQ96S21 281 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms