RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 LPAR4Q99677 370 aa17.34■□□□□ 0.37
HDAC6-231ENST00000488905 UTP23Q9BRU9 249 aaKnown RBP17.34■□□□□ 0.37
HDAC6-231ENST00000488905 KLHL1Q9NR64 748 aa17.34■□□□□ 0.37
HDAC6-231ENST00000488905 LANCL2Q9NS86 450 aa17.34■□□□□ 0.37
HDAC6-231ENST00000488905 ANKRD10Q9NXR5 420 aa17.34■□□□□ 0.37
HDAC6-231ENST00000488905 FAM227AF5H4B4 570 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 NDUFS4O43181 175 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 MAN1A2O60476 641 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 WISP2O76076 250 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 IL10P22301 178 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 HTR1EP28566 365 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 PTGER4P35408 488 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 ST13P50502 369 aaKnown RBP17.33■□□□□ 0.36
HDAC6-231ENST00000488905 USP10Q14694 798 aaKnown RBP17.33■□□□□ 0.36
HDAC6-231ENST00000488905 HERC3Q15034 1050 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 NSDHLQ15738 373 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 C3AR1Q16581 482 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 RBM20Q5T481 1227 aaKnown RBP17.33■□□□□ 0.36
HDAC6-231ENST00000488905 PAQR3Q6TCH7 311 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 GDF7Q7Z4P5 450 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 PPIL6Q8IXY8 311 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 AFAP1L2Q8N4X5 818 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 SLC5A8Q8N695 610 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 ZNF740Q8NDX6 193 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 PLPP5Q8NEB5 264 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 OR5T3Q8NGG3 340 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 THAP3Q8WTV1 239 aaPredicted RBP17.33■□□□□ 0.36
HDAC6-231ENST00000488905 PBKQ96KB5 322 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 GPR137Q96N19 417 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 NAP1L3Q99457 506 aaPredicted RBP17.33■□□□□ 0.36
HDAC6-231ENST00000488905 HAUS8Q9BT25 410 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 CHST11Q9NPF2 352 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 TINAGQ9UJW2 476 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 PPP2R2CQ9Y2T4 447 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 F8P00451 2351 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 POLQO75417 2590 aa17.33■□□□□ 0.36
HDAC6-231ENST00000488905 CCDC168Q8NDH2 2452 aa17.32■□□□□ 0.36
HDAC6-231ENST00000488905 ASPDHA6ND91 283 aa17.32■□□□□ 0.36
HDAC6-231ENST00000488905 GABRR3A8MPY1 467 aa17.32■□□□□ 0.36
HDAC6-231ENST00000488905 MAGEB17A8MXT2 336 aa17.32■□□□□ 0.36
HDAC6-231ENST00000488905 PGRMC1O00264 195 aaKnown RBP17.32■□□□□ 0.36
HDAC6-231ENST00000488905 MLYCDO95822 493 aa17.32■□□□□ 0.36
HDAC6-231ENST00000488905 FHP07954 510 aa17.32■□□□□ 0.36
HDAC6-231ENST00000488905 NPPBP16860 134 aa17.32■□□□□ 0.36
HDAC6-231ENST00000488905 EEF1DP29692 281 aaKnown RBP17.32■□□□□ 0.36
HDAC6-231ENST00000488905 CD96P40200 585 aa17.32■□□□□ 0.36
HDAC6-231ENST00000488905 CCR8P51685 355 aa17.32■□□□□ 0.36
HDAC6-231ENST00000488905 CDKN2DP55273 166 aa17.32■□□□□ 0.36
HDAC6-231ENST00000488905 SLC26A5P58743 744 aa17.32■□□□□ 0.36
HDAC6-231ENST00000488905 TAS2R50P59544 299 aa17.32■□□□□ 0.36
HDAC6-231ENST00000488905 ADORA2A-AS1P86434 159 aa17.32■□□□□ 0.36
HDAC6-231ENST00000488905 CCZ1BP86790 482 aa17.32■□□□□ 0.36
HDAC6-231ENST00000488905 CCZ1P86791 482 aaPredicted RBP17.32■□□□□ 0.36
HDAC6-231ENST00000488905 MEF2AQ02078 507 aaPredicted RBP17.32■□□□□ 0.36
HDAC6-231ENST00000488905 ACTN3Q08043 901 aaPredicted RBP17.32■□□□□ 0.36
HDAC6-231ENST00000488905 ZNF630Q2M218 657 aaPredicted RBP17.32■□□□□ 0.36
HDAC6-231ENST00000488905 RNASEH2BQ5TBB1 312 aaKnown RBP17.32■□□□□ 0.36
HDAC6-231ENST00000488905 LRRC8AQ8IWT6 810 aa17.32■□□□□ 0.36
HDAC6-231ENST00000488905 LGI4Q8N135 537 aa17.32■□□□□ 0.36
HDAC6-231ENST00000488905 TMEM178AQ8NBL3 297 aa17.32■□□□□ 0.36
HDAC6-231ENST00000488905 ABHD11Q8NFV4 315 aa17.32■□□□□ 0.36
HDAC6-231ENST00000488905 GABPB2Q8TAK5 448 aaPredicted RBP17.32■□□□□ 0.36
HDAC6-231ENST00000488905 GRK7Q8WTQ7 553 aa17.32■□□□□ 0.36
HDAC6-231ENST00000488905 FRMD6Q96NE9 622 aa17.32■□□□□ 0.36
HDAC6-231ENST00000488905 SARGQ9BW04 601 aa17.32■□□□□ 0.36
HDAC6-231ENST00000488905 TSPAN10Q9H1Z9 355 aaPredicted RBP17.32■□□□□ 0.36
HDAC6-231ENST00000488905 JRKLQ9Y4A0 524 aa17.32■□□□□ 0.36
HDAC6-231ENST00000488905 PABPN1LA6NDY0 278 aaKnown RBP17.31■□□□□ 0.36
HDAC6-231ENST00000488905 GALR3O60755 368 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-231ENST00000488905 TSPAN12O95859 305 aa17.31■□□□□ 0.36
HDAC6-231ENST00000488905 HIST1H2AGP0C0S8 130 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-231ENST00000488905 CD46P15529 392 aa17.31■□□□□ 0.36
HDAC6-231ENST00000488905 HIST1H2ADP20671 130 aa17.31■□□□□ 0.36
HDAC6-231ENST00000488905 GABRB3P28472 473 aa17.31■□□□□ 0.36
HDAC6-231ENST00000488905 FNTAP49354 379 aa17.31■□□□□ 0.36
HDAC6-231ENST00000488905 OR4D2P58180 307 aa17.31■□□□□ 0.36
HDAC6-231ENST00000488905 SKP1P63208 163 aa17.31■□□□□ 0.36
HDAC6-231ENST00000488905 ALDH6A1Q02252 535 aaKnown RBP17.31■□□□□ 0.36
HDAC6-231ENST00000488905 ZXDCQ2QGD7 858 aaPredicted RBP17.31■□□□□ 0.36
HDAC6-231ENST00000488905 DUPD1Q68J44 220 aa17.31■□□□□ 0.36
HDAC6-231ENST00000488905 SPINK14Q6IE38 97 aa17.31■□□□□ 0.36
HDAC6-231ENST00000488905 XKRXQ6PP77 449 aa17.31■□□□□ 0.36
HDAC6-231ENST00000488905 CNTN4Q8IWV2 1026 aa17.31■□□□□ 0.36
HDAC6-231ENST00000488905 TBC1D20Q96BZ9 403 aa17.31■□□□□ 0.36
HDAC6-231ENST00000488905 PYCR2Q96C36 320 aa17.31■□□□□ 0.36
HDAC6-231ENST00000488905 HIST1H2AHQ96KK5 128 aa17.31■□□□□ 0.36
HDAC6-231ENST00000488905 HIST1H2AJQ99878 128 aa17.31■□□□□ 0.36
HDAC6-231ENST00000488905 H2AFJQ9BTM1 129 aa17.31■□□□□ 0.36
HDAC6-231ENST00000488905 ARL15Q9NXU5 204 aa17.31■□□□□ 0.36
HDAC6-231ENST00000488905 ZNF835Q9Y2P0 537 aa17.31■□□□□ 0.36
HDAC6-231ENST00000488905 TRBC2A0A5B9 178 aa17.3■□□□□ 0.36
HDAC6-231ENST00000488905 OR1F1O43749 312 aa17.3■□□□□ 0.36
HDAC6-231ENST00000488905 BANF1O75531 89 aa17.3■□□□□ 0.36
HDAC6-231ENST00000488905 NEURL1O76050 574 aa17.3■□□□□ 0.36
HDAC6-231ENST00000488905 TTC4O95801 387 aa17.3■□□□□ 0.36
HDAC6-231ENST00000488905 ESRRAP11474 423 aaPredicted RBP17.3■□□□□ 0.36
HDAC6-231ENST00000488905 COX6B1P14854 86 aa17.3■□□□□ 0.36
HDAC6-231ENST00000488905 ALOX12P18054 663 aa17.3■□□□□ 0.36
HDAC6-231ENST00000488905 AGAP20933 346 aa17.3■□□□□ 0.36
HDAC6-231ENST00000488905 JAK1P23458 1154 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms