RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 VCANP13611 3396 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 A0A096LPI6 279 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 ISM1B1AKI9 464 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 H3BNX3 289 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 DFNA5O60443 496 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 ERN1O75460 977 aaKnown RBP9.03□□□□□ -0.96
SF3B1-211ENST00000487698 B3GALT4O96024 378 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 PDGFBP01127 241 aaPredicted RBP9.03□□□□□ -0.96
SF3B1-211ENST00000487698 VIPP01282 170 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 COX7A2P14406 83 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 HOXB3P14651 431 aaPredicted RBP9.03□□□□□ -0.96
SF3B1-211ENST00000487698 TPP2P29144 1249 aaPredicted RBP9.03□□□□□ -0.96
SF3B1-211ENST00000487698 BSGP35613 385 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 AHRP35869 848 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 GSK3BP49841 420 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 NXPH1P58417 271 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 AP2B1P63010 937 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 BNIP2Q12982 314 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 C1orf61Q13536 156 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 PDE7AQ13946 482 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 SELPLGQ14242 412 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 PLCL1Q15111 1095 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 ZIC1Q15915 447 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 CCDC6Q16204 474 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 HKDC1Q2TB90 917 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 PGS1Q32NB8 556 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 OR4F3Q6IEY1 312 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 ADCK2Q7Z695 626 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 PAQR7Q86WK9 346 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 PTRH1Q86Y79 214 aaKnown RBP9.03□□□□□ -0.96
SF3B1-211ENST00000487698 HIPK4Q8NE63 616 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 SLC26A7Q8TE54 656 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 PYDC1Q8WXC3 89 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 SLC22A18Q96BI1 424 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 ITCHQ96J02 903 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 OR2A14Q96R47 310 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 F2RL3Q96RI0 385 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 AICDAQ9GZX7 198 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 ALG2Q9H553 416 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 RMND5AQ9H871 391 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 SYNPO2LQ9H987 977 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 LHX9Q9NQ69 397 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 FAM120CQ9NX05 1096 aaKnown RBP9.03□□□□□ -0.96
SF3B1-211ENST00000487698 BCAP29Q9UHQ4 241 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 ATP6V1HQ9UI12 483 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 SNX7Q9UNH6 387 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 BTBD3Q9Y2F9 522 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 AP1M2Q9Y6Q5 423 aa9.03□□□□□ -0.96
SF3B1-211ENST00000487698 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 CCDC163A0A0D9SF12 145 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 GABRR3A8MPY1 467 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 NDUFS4O43181 175 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 TNFSF14O43557 240 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 C8BP07358 591 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 LAMP1P11279 417 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 PIM1P11309 404 aaPredicted RBP9.02□□□□□ -0.96
SF3B1-211ENST00000487698 TDGF1P13385 188 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 ANPEPP15144 967 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 UGT2B7P16662 529 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 GCKP35557 465 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 GRK3P35626 688 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 HPCAL1P37235 193 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 GRIA3P42263 894 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 PLIN5Q00G26 463 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 LIPEQ05469 1076 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 SLC34A1Q06495 639 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 HYAL2Q12891 473 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 ADPRMQ3LIE5 342 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 FAM71E1Q6IPT2 247 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 IKBIPQ70UQ0 350 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 UBE3DQ7Z6J8 389 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 RBM12BQ8IXT5 1001 aaKnown RBP9.02□□□□□ -0.96
SF3B1-211ENST00000487698 TMEFF1Q8IYR6 380 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 CDC26Q8NHZ8 85 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 C16orf78Q8WTQ4 265 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 ZDHHC1Q8WTX9 485 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 COQ8BQ96D53 544 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 INPP5KQ9BT40 448 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 SORBS1Q9BX66 1292 aaKnown RBP9.02□□□□□ -0.96
SF3B1-211ENST00000487698 MIR1-1HGQ9H1L0 117 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 IKZF5Q9H5V7 419 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 PRMT8Q9NR22 394 aaPredicted RBP9.02□□□□□ -0.96
SF3B1-211ENST00000487698 AHSPQ9NZD4 102 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 PCDHGA4Q9Y5G9 962 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 KLK4Q9Y5K2 254 aa9.02□□□□□ -0.96
SF3B1-211ENST00000487698 SDK1Q7Z5N4 2213 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 OR2A25A4D2G3 310 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 OR6C74A6NCV1 312 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 LRIT2A6NDA9 550 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 VILLO15195 856 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 YY2O15391 372 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 DNAJA2O60884 412 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 GBAP04062 536 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 KLK1P06870 262 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 ATP6V1B2P21281 511 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 CDKN2CP42773 168 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 MTPNP58546 118 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 SIGLEC14Q08ET2 396 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 ELOCQ15369 112 aa9.02□□□□□ -0.97
SF3B1-211ENST00000487698 GTDC1Q4AE62 458 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms