RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 ETHE1O95571 254 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 ANP32DO95626 131 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 EML2O95834 649 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 CSF2P04141 144 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 HSD17B1P14061 328 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 COX7A2P14406 83 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 NME1P15531 152 aaKnown RBP6.75□□□□□ -1.33
SF3A3-206ENST00000487062 TCN1P20061 433 aaPredicted RBP6.75□□□□□ -1.33
SF3A3-206ENST00000487062 SLC6A2P23975 617 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 TACR1P25103 407 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 HOXA6P31267 233 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 AHRP35869 848 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 KIR3DL1P43629 444 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 TRPC1P48995 793 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 HNRNPFP52597 415 aaKnown RBP6.75□□□□□ -1.33
SF3A3-206ENST00000487062 ARFIP1P53367 373 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 EPHA4P54764 986 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 C21orf59P57076 290 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 HNRNPKP61978 463 aaKnown RBP eCLIP6.75□□□□□ -1.33
SF3A3-206ENST00000487062 RPS15AP62244 130 aaKnown RBP6.75□□□□□ -1.33
SF3A3-206ENST00000487062 RAE1P78406 368 aaKnown RBP6.75□□□□□ -1.33
SF3A3-206ENST00000487062 DAB2P98082 770 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 TGM3Q08188 693 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 ZNF763Q0D2J5 394 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 CAPRIN1Q14444 709 aaKnown RBP6.75□□□□□ -1.33
SF3A3-206ENST00000487062 RCN1Q15293 331 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 TEAD4Q15561 434 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 AASDHQ4L235 1098 aaPredicted RBP6.75□□□□□ -1.33
SF3A3-206ENST00000487062 TMEM35AQ53FP2 167 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 ZNF542PQ5EBM4 170 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 CPTPQ5TA50 214 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 ANXA8L1Q5VT79 327 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 KHDRBS2Q5VWX1 349 aaKnown RBP6.75□□□□□ -1.33
SF3A3-206ENST00000487062 ADNP2Q6IQ32 1131 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 NANOGP8Q6NSW7 305 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 ARMC6Q6NXE6 501 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 ZFP1Q6P2D0 407 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 COMMD6Q7Z4G1 85 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 C11orf74Q86VG3 221 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 BPHLQ86WA6 291 aaPredicted RBP6.75□□□□□ -1.33
SF3A3-206ENST00000487062 RIMKLAQ8IXN7 391 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 SLC15A3Q8IY34 581 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 ADGRF3Q8IZF5 1079 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 TMEM132CQ8N3T6 1108 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 RNF148Q8N7C7 305 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 SRFBP1Q8NEF9 429 aaKnown RBP6.75□□□□□ -1.33
SF3A3-206ENST00000487062 FAM46DQ8NEK8 389 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 TNIP2Q8NFZ5 429 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 OR8J3Q8NGG0 315 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 OR8J2Q8NGG1 315 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 DNAJB14Q8TBM8 379 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 SLC26A7Q8TE54 656 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 SLC37A2Q8TED4 501 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 ZDHHC1Q8WTX9 485 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 GTF2H4Q92759 462 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 TMEM125Q96AQ2 219 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 RGMAQ96B86 450 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 MTERF3Q96E29 417 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 C11orf24Q96F05 449 aaPredicted RBP6.75□□□□□ -1.33
SF3A3-206ENST00000487062 RSRC1Q96IZ7 334 aaKnown RBP6.75□□□□□ -1.33
SF3A3-206ENST00000487062 SLC45A3Q96JT2 553 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 TMEM74Q96NL1 305 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 GBP5Q96PP8 586 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 CGREF1Q99674 301 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 NRTNQ99748 197 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 SLC39A3Q9BRY0 314 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 DPH7Q9BTV6 452 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 SARGQ9BW04 601 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 TGIF2Q9GZN2 237 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 DUSP15Q9H1R2 295 aaPredicted RBP6.75□□□□□ -1.33
SF3A3-206ENST00000487062 KCNH6Q9H252 994 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 TCEAL2Q9H3H9 227 aaPredicted RBP6.75□□□□□ -1.33
SF3A3-206ENST00000487062 NANOGQ9H9S0 305 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 S100A14Q9HCY8 104 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 TM9SF3Q9HD45 589 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 MYNNQ9NPC7 610 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 ATAD3AQ9NVI7 634 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 ANKMY1Q9P2S6 941 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 STX18Q9P2W9 335 aaKnown RBP6.75□□□□□ -1.33
SF3A3-206ENST00000487062 CPNE7Q9UBL6 633 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.75□□□□□ -1.33
SF3A3-206ENST00000487062 CD300AQ9UGN4 299 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 KLF15Q9UIH9 416 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 PACSIN3Q9UKS6 424 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 MAN2B2Q9Y2E5 1009 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 PCDHA9Q9Y5H5 950 aa6.75□□□□□ -1.33
SF3A3-206ENST00000487062 MDC1Q14676 2089 aaKnown RBP6.74□□□□□ -1.33
SF3A3-206ENST00000487062 A0A096LPI6 279 aa6.74□□□□□ -1.33
SF3A3-206ENST00000487062 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.74□□□□□ -1.33
SF3A3-206ENST00000487062 PRAMEF33A0A0G2JMD5 474 aa6.74□□□□□ -1.33
SF3A3-206ENST00000487062 FEZF1A0PJY2 475 aa6.74□□□□□ -1.33
SF3A3-206ENST00000487062 GSAPA4D1B5 854 aa6.74□□□□□ -1.33
SF3A3-206ENST00000487062 OR6C74A6NCV1 312 aa6.74□□□□□ -1.33
SF3A3-206ENST00000487062 PRORSD1PA6NEY8 169 aa6.74□□□□□ -1.33
SF3A3-206ENST00000487062 C2orf74A8MZ97 194 aa6.74□□□□□ -1.33
SF3A3-206ENST00000487062 SAP18O00422 153 aaKnown RBP6.74□□□□□ -1.33
SF3A3-206ENST00000487062 BTN3A3O00478 584 aa6.74□□□□□ -1.33
SF3A3-206ENST00000487062 VILLO15195 856 aa6.74□□□□□ -1.33
SF3A3-206ENST00000487062 CAPN5O15484 640 aaPredicted RBP6.74□□□□□ -1.33
SF3A3-206ENST00000487062 NDUFS4O43181 175 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms