RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 NEIL2Q969S2 332 aa13.62□□□□□ -0.23
CLDN11-207ENST00000486975 PSMG3-AS1Q96PY0 264 aa13.62□□□□□ -0.23
CLDN11-207ENST00000486975 OR1F2PQ96R84 312 aa13.62□□□□□ -0.23
CLDN11-207ENST00000486975 MACROD1Q9BQ69 325 aa13.62□□□□□ -0.23
CLDN11-207ENST00000486975 DPH5Q9H2P9 285 aa13.62□□□□□ -0.23
CLDN11-207ENST00000486975 PELI2Q9HAT8 420 aa13.62□□□□□ -0.23
CLDN11-207ENST00000486975 GPAMQ9HCL2 828 aa13.62□□□□□ -0.23
CLDN11-207ENST00000486975 SMYD2Q9NRG4 433 aa13.62□□□□□ -0.23
CLDN11-207ENST00000486975 C19orf25Q9UFG5 118 aaPredicted RBP13.62□□□□□ -0.23
CLDN11-207ENST00000486975 ZFP69BQ9UJL9 534 aa13.62□□□□□ -0.23
CLDN11-207ENST00000486975 CSAG2Q9Y5P2 127 aa13.62□□□□□ -0.23
CLDN11-207ENST00000486975 COPG1Q9Y678 874 aaKnown RBP13.62□□□□□ -0.23
CLDN11-207ENST00000486975 KCNE2Q9Y6J6 123 aa13.62□□□□□ -0.23
CLDN11-207ENST00000486975 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.62□□□□□ -0.23
CLDN11-207ENST00000486975 MAST4O15021 2626 aa13.62□□□□□ -0.23
CLDN11-207ENST00000486975 CNTRLQ7Z7A1 2325 aa13.62□□□□□ -0.23
CLDN11-207ENST00000486975 ESPL1Q14674 2120 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 NPEPPSL1A6NEC2 478 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 SGK494L7N484 410 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 NDUFS4O43181 175 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 OR1F1O43749 312 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 JRKO75564 520 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 C1QAP02745 245 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 SAT1P21673 171 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 SSTR1P30872 391 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 CASQ1P31415 396 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 AGTR2P50052 363 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 SKP1P63208 163 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 REEP5Q00765 189 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 CAV1Q03135 178 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 CATSPEREQ5SY80 951 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 RPUSD3Q6P087 351 aaKnown RBP13.61□□□□□ -0.23
CLDN11-207ENST00000486975 LINC00696Q6ZRV3 163 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 THOC6Q86W42 341 aaKnown RBP13.61□□□□□ -0.23
CLDN11-207ENST00000486975 ZCCHC10Q8TBK6 192 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 BRIX1Q8TDN6 353 aaKnown RBP13.61□□□□□ -0.23
CLDN11-207ENST00000486975 ANKRD49Q8WVL7 239 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 TSPAN17Q96FV3 270 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 CYTH2Q99418 400 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 CPNE1Q99829 537 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 DERL2Q9GZP9 239 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 RNF32Q9H0A6 362 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 RAB17Q9H0T7 212 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 CLK4Q9HAZ1 481 aaKnown RBP13.61□□□□□ -0.23
CLDN11-207ENST00000486975 SAYSD1Q9NPB0 183 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 AGPAT4Q9NRZ5 378 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 HCN3Q9P1Z3 774 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 CTNNAL1Q9UBT7 734 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 NTNG1Q9Y2I2 539 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 NAALAD2Q9Y3Q0 740 aa13.61□□□□□ -0.23
CLDN11-207ENST00000486975 SPTBN1Q01082 2364 aaKnown RBP13.6□□□□□ -0.23
CLDN11-207ENST00000486975 TCRBV9S1A1TA0A576 114 aa13.6□□□□□ -0.23
CLDN11-207ENST00000486975 FAM159BA6NKW6 160 aa13.6□□□□□ -0.23
CLDN11-207ENST00000486975 GALR3O60755 368 aaPredicted RBP13.6□□□□□ -0.23
CLDN11-207ENST00000486975 RDH16O75452 317 aa13.6□□□□□ -0.23
CLDN11-207ENST00000486975 AGFG2O95081 481 aa13.6□□□□□ -0.23
CLDN11-207ENST00000486975 GP1BBP13224 206 aa13.6□□□□□ -0.23
CLDN11-207ENST00000486975 ALOX12P18054 663 aa13.6□□□□□ -0.23
CLDN11-207ENST00000486975 SLC6A12P48065 614 aa13.6□□□□□ -0.23
CLDN11-207ENST00000486975 SLC12A2P55011 1212 aa13.6□□□□□ -0.23
CLDN11-207ENST00000486975 MRPS25P82663 173 aaKnown RBP13.6□□□□□ -0.23
CLDN11-207ENST00000486975 MEF2AQ02078 507 aaPredicted RBP13.6□□□□□ -0.23
CLDN11-207ENST00000486975 RGS1Q08116 209 aa13.6□□□□□ -0.23
CLDN11-207ENST00000486975 MRPL49Q13405 166 aaKnown RBP13.6□□□□□ -0.23
CLDN11-207ENST00000486975 ZNF460Q14592 562 aa13.6□□□□□ -0.23
CLDN11-207ENST00000486975 TSNQ15631 228 aaKnown RBP13.6□□□□□ -0.23
CLDN11-207ENST00000486975 MINDY4Q4G0A6 757 aa13.6□□□□□ -0.23
CLDN11-207ENST00000486975 CDKL4Q5MAI5 379 aa13.6□□□□□ -0.23
CLDN11-207ENST00000486975 FAAH2Q6GMR7 532 aa13.6□□□□□ -0.23
CLDN11-207ENST00000486975 NXPE4Q6UWF7 544 aa13.6□□□□□ -0.23
CLDN11-207ENST00000486975 CPEB2Q7Z5Q1 589 aaKnown RBP13.6□□□□□ -0.23
CLDN11-207ENST00000486975 ZNF740Q8NDX6 193 aa13.6□□□□□ -0.23
CLDN11-207ENST00000486975 TRPV3Q8NET8 790 aa13.6□□□□□ -0.23
CLDN11-207ENST00000486975 HAS2Q92819 552 aa13.6□□□□□ -0.23
CLDN11-207ENST00000486975 GPR22Q99680 433 aa13.6□□□□□ -0.23
CLDN11-207ENST00000486975 RBBP8Q99708 897 aa13.6□□□□□ -0.23
CLDN11-207ENST00000486975 SPNS1Q9H2V7 528 aa13.6□□□□□ -0.23
CLDN11-207ENST00000486975 MAP10Q9P2G4 905 aa13.6□□□□□ -0.23
CLDN11-207ENST00000486975 TXNDC16Q9P2K2 825 aa13.6□□□□□ -0.23
CLDN11-207ENST00000486975 SLC22A14Q9Y267 594 aa13.6□□□□□ -0.23
CLDN11-207ENST00000486975 UTP11Q9Y3A2 253 aaKnown RBP13.6□□□□□ -0.23
CLDN11-207ENST00000486975 DYRK1BQ9Y463 629 aa13.6□□□□□ -0.23
CLDN11-207ENST00000486975 POLEQ07864 2286 aa13.6□□□□□ -0.23
CLDN11-207ENST00000486975 PRRC2CQ9Y520 2896 aaKnown RBP13.59□□□□□ -0.23
CLDN11-207ENST00000486975 HIVEP3Q5T1R4 2406 aa13.59□□□□□ -0.23
CLDN11-207ENST00000486975 DYTNA2CJ06 578 aa13.59□□□□□ -0.23
CLDN11-207ENST00000486975 MAGEB17A8MXT2 336 aa13.59□□□□□ -0.23
CLDN11-207ENST00000486975 CXorf49A8MYA2 514 aaPredicted RBP13.59□□□□□ -0.23
CLDN11-207ENST00000486975 WFS1O76024 890 aa13.59□□□□□ -0.23
CLDN11-207ENST00000486975 GNAZP19086 355 aa13.59□□□□□ -0.23
CLDN11-207ENST00000486975 GP5P40197 560 aa13.59□□□□□ -0.23
CLDN11-207ENST00000486975 GLRBP48167 497 aa13.59□□□□□ -0.23
CLDN11-207ENST00000486975 C2orf54Q08AI8 447 aa13.59□□□□□ -0.23
CLDN11-207ENST00000486975 NR6A1Q15406 480 aa13.59□□□□□ -0.23
CLDN11-207ENST00000486975 TGFBIQ15582 683 aa13.59□□□□□ -0.23
CLDN11-207ENST00000486975 ZKSCAN8Q15776 578 aaPredicted RBP13.59□□□□□ -0.23
CLDN11-207ENST00000486975 INAQ16352 499 aa13.59□□□□□ -0.23
CLDN11-207ENST00000486975 PLAG1Q6DJT9 500 aa13.59□□□□□ -0.23
CLDN11-207ENST00000486975 CAPN12Q6ZSI9 719 aa13.59□□□□□ -0.23
CLDN11-207ENST00000486975 LANCL3Q6ZV70 420 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms