RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-205	ENST00000486941	RTL3	Q8N8U3	475 aa	Known RBP	3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941		Q8N9G6	341 aa	Predicted RBP	3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	OR56A4	Q8NGH8	313 aa		3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	JOSD2	Q8TAC2	188 aa		3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	KIAA1524	Q8TCG1	905 aa		3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	ABHD5	Q8WTS1	349 aa		3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	FAM172A	Q8WUF8	416 aa		3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	IPCEF1	Q8WWN9	437 aa	Predicted RBP	3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	OR1E3	Q8WZA6	343 aa		3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	PDXP	Q96GD0	296 aa		3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	NCAPG	Q9BPX3	1015 aa		3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	SLC25A18	Q9H1K4	315 aa		3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	ADNP	Q9H2P0	1102 aa		3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	DPEP2	Q9H4A9	486 aa		3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	LRRC19	Q9H756	370 aa		3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	CATSPERB	Q9H7T0	1116 aa		3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	FGF22	Q9HCT0	170 aa		3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	TXLNG	Q9NUQ3	528 aa		3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	DONSON	Q9NYP3	566 aa		3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	AKAP7	Q9P0M2	348 aa	Predicted RBP	3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	LHX3	Q9UBR4	397 aa		3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	UBA2	Q9UBT2	640 aa	Predicted RBP	3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	PLEKHB1	Q9UF11	243 aa	Predicted RBP	3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	NOCT	Q9UK39	431 aa	Known RBP	3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	OR1A2	Q9Y585	309 aa		3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	RNF215	Q9Y6U7	377 aa		3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	USP9X	Q93008	2570 aa	Predicted RBP	3.91	□□□□□ -1.78
SNRNP40-205	ENST00000486941	SEC16A	O15027	2179 aa		3.9	□□□□□ -1.78
SNRNP40-205	ENST00000486941	CACNA1D	Q01668	2161 aa		3.9	□□□□□ -1.78
SNRNP40-205	ENST00000486941	CREBBP	Q92793	2442 aa		3.9	□□□□□ -1.78
SNRNP40-205	ENST00000486941	RPS10-NUDT3	A0A1W2PQS6	291 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	FAM170A	A1A519	330 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	SIGLEC16	A6NMB1	481 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	RHPN2P1	A8MT19	583 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	EIF3CL	B5ME19	914 aa	Known RBP	3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	STMND1	H3BQB6	276 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	PRAMEF11	O60813	436 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	RECQL5	O94762	991 aa	Predicted RBP	3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	GFPT2	O94808	682 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	PIGN	O95427	931 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	PCCB	P05166	539 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	FGF1	P05230	155 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	CALB1	P05937	261 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	UNG	P13051	313 aa	Predicted RBP	3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	CCNB1	P14635	433 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	RHCE	P18577	417 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	EEF1G	P26641	437 aa	Known RBP	3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	SERPINA4	P29622	427 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	ETV5	P41161	510 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	NSF	P46459	744 aa	Known RBP	3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	NDST2	P52849	883 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	LIMK2	P53671	638 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	UBE2H	P62256	183 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	ABAT	P80404	500 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941		Q0VFX4	171 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	RALGDS	Q12967	914 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	PTP4A2	Q12974	167 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	TRA2A	Q13595	282 aa	Known RBP eCLIP	3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	PEX6	Q13608	980 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	ESPL1	Q14674	2120 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	RFTN1	Q14699	578 aa	Predicted RBP	3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	NR1D2	Q14995	579 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	C16orf72	Q14CZ0	275 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	CAMK4	Q16566	473 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	CFAP58	Q5T655	872 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	KCTD16	Q68DU8	428 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	SPECC1L	Q69YQ0	1117 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	KRTAP5-1	Q6L8H4	278 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	PNCK	Q6P2M8	343 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	SCYL2	Q6P3W7	929 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	DPPA4	Q7L190	304 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	PHLDB2	Q86SQ0	1253 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	ZNF329	Q86UD4	541 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	VASH2	Q86V25	355 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	PHF13	Q86YI8	300 aa	Predicted RBP	3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	SFTPA2	Q8IWL1	248 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	PYROXD2	Q8N2H3	581 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	SLC20A1	Q8WUM9	679 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	HTR3C	Q8WXA8	447 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	ECHDC3	Q96DC8	303 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	LRRC46	Q96FV0	321 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	PCDHB18P	Q96TA0	734 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	EIF3C	Q99613	913 aa	Known RBP	3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	C11orf70	Q9BRQ4	267 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	FUCA2	Q9BTY2	467 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	GSDMC	Q9BYG8	508 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	TRIM4	Q9C037	500 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	ATP13A3	Q9H7F0	1226 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	PDF	Q9HBH1	243 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	MRPL40	Q9NQ50	206 aa	Known RBP	3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	SPATS2L	Q9NUQ6	558 aa	Known RBP	3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	ADAM22	Q9P0K1	906 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	FZD10	Q9ULW2	581 aa		3.9	□□□□□ -1.79
SNRNP40-205	ENST00000486941	COL12A1	Q99715	3063 aa		3.89	□□□□□ -1.79
SNRNP40-205	ENST00000486941	TEX15	Q9BXT5	2789 aa		3.89	□□□□□ -1.79
SNRNP40-205	ENST00000486941	IGHV5-10-1	A0A0J9YXX1	117 aa		3.89	□□□□□ -1.79
SNRNP40-205	ENST00000486941		A0A1W2PQ67	120 aa		3.89	□□□□□ -1.79
SNRNP40-205	ENST00000486941	ARHGAP42	A6NI28	874 aa		3.89	□□□□□ -1.79
SNRNP40-205	ENST00000486941	VSTM5	A8MXK1	200 aa		3.89	□□□□□ -1.79
SNRNP40-205	ENST00000486941		B4E171	279 aa		3.89	□□□□□ -1.79

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