RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 ARHGAP33O14559 1287 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 WNT9AO14904 365 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 COCHO43405 550 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 ITGALP20701 1170 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 HTR3AP46098 478 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 UGT2B15P54855 530 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 PLD1Q13393 1074 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 KEAP1Q14145 624 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 NFE2Q16621 373 aaPredicted RBP11.94□□□□□ -0.5
HSPG2-211ENST00000486901 PTCHD4Q6ZW05 846 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 IQCF1Q8N6M8 205 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 ASCC1Q8N9N2 400 aaKnown RBP11.94□□□□□ -0.5
HSPG2-211ENST00000486901 GLB1L3Q8NCI6 653 aaPredicted RBP11.94□□□□□ -0.5
HSPG2-211ENST00000486901 GPR26Q8NDV2 337 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 TRPV1Q8NER1 839 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 NFKBIDQ8NI38 313 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 SCAMP4Q969E2 229 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 CIDECQ96AQ7 238 aaPredicted RBP11.94□□□□□ -0.5
HSPG2-211ENST00000486901 PDLIM5Q96HC4 596 aaKnown RBP11.94□□□□□ -0.5
HSPG2-211ENST00000486901 ASPNQ9BXN1 380 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 IRF2BPLQ9H1B7 796 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 VPS9D1Q9Y2B5 631 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 OARD1Q9Y530 152 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 PCDHGB1Q9Y5G3 927 aa11.94□□□□□ -0.5
HSPG2-211ENST00000486901 A0A1B0GVC2 190 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 A6NIN4 97 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 SH3BP5O60239 455 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 CSKP41240 450 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 CSNK1DP48730 415 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 ZNF181Q2M3W8 571 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 ATP13A5Q4VNC0 1218 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 SYCE2Q6PIF2 218 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 MINDY2Q8NBR6 621 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 OR9Q1Q8NGQ5 310 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 MYO19Q96H55 970 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 SLC30A2Q9BRI3 323 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 MAGEH1Q9H213 219 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 SP140LQ9H930 580 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 OLA1Q9NTK5 396 aaKnown RBP11.93□□□□□ -0.5
HSPG2-211ENST00000486901 GAPDHSO14556 408 aaPredicted RBP11.93□□□□□ -0.5
HSPG2-211ENST00000486901 KDELR3O43731 214 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 AP2A2O94973 939 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 F11P03951 625 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 CDK1P06493 297 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 HIST1H2AGP0C0S8 130 aaPredicted RBP11.93□□□□□ -0.5
HSPG2-211ENST00000486901 ATF6P18850 670 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 HIST1H2ADP20671 130 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 CNR2P34972 360 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 MAPKAPK2P49137 400 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 PRIM2P49643 509 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 LSM11P83369 360 aaKnown RBP eCLIP11.93□□□□□ -0.54e-6■■□□□ 11.8
HSPG2-211ENST00000486901 ACSM2AQ08AH3 577 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 DUOXA1Q1HG43 343 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 RPS26P11Q5JNZ5 115 aaPredicted RBP11.93□□□□□ -0.5
HSPG2-211ENST00000486901 ACSM2BQ68CK6 577 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 ERAP2Q6P179 960 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 PNCKQ6P2M8 343 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 FAM131AQ6UXB0 335 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 EIF3MQ7L2H7 374 aaKnown RBP11.93□□□□□ -0.5
HSPG2-211ENST00000486901 OTOP2Q7RTS6 562 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 TSEN54Q7Z6J9 526 aaKnown RBP11.93□□□□□ -0.5
HSPG2-211ENST00000486901 ZSWIM9Q86XI8 627 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 RBFAQ8N0V3 343 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 HIST1H2AHQ96KK5 128 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 NRTNQ99748 197 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 HIST1H2AJQ99878 128 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 H2AFJQ9BTM1 129 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 PCDHB8Q9UN66 801 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 CFAP20Q9Y6A4 193 aaKnown RBP11.93□□□□□ -0.5
HSPG2-211ENST00000486901 CLDN24A6NM45 220 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 H3BNC9 293 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 ASGR1P07306 291 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 EBLN1P0CF75 366 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 SOX6P35712 828 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 KCNJ10P78508 379 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 IL18R1Q13478 541 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 CDH18Q13634 790 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 SPDYE7PQ495Y7 208 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 B3GLCTQ6Y288 498 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 TAGAPQ8N103 731 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 SYT14Q8NB59 555 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 MYDGFQ969H8 173 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 ZNF566Q969W8 418 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 ZIC5Q96T25 663 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 CCNB1IP1Q9NPC3 277 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 NDUFAF4Q9P032 175 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 C5AR2Q9P296 337 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 RPS6KA6Q9UK32 745 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 CARD8Q9Y2G2 431 aa11.93□□□□□ -0.5
HSPG2-211ENST00000486901 MYO16Q9Y6X6 1858 aa11.92□□□□□ -0.5
HSPG2-211ENST00000486901 TMEM202A6NGA9 273 aa11.92□□□□□ -0.5
HSPG2-211ENST00000486901 PRAMEF25A6NGN4 478 aa11.92□□□□□ -0.5
HSPG2-211ENST00000486901 GABRR3A8MPY1 467 aa11.92□□□□□ -0.5
HSPG2-211ENST00000486901 E7EQ34 232 aa11.92□□□□□ -0.5
HSPG2-211ENST00000486901 AKR7A2O43488 359 aa11.92□□□□□ -0.5
HSPG2-211ENST00000486901 SEMA3DO95025 777 aa11.92□□□□□ -0.5
HSPG2-211ENST00000486901 TYMPP19971 482 aa11.92□□□□□ -0.5
HSPG2-211ENST00000486901 PREPP48147 710 aa11.92□□□□□ -0.5
HSPG2-211ENST00000486901 FLT3LGP49771 235 aa11.92□□□□□ -0.5
HSPG2-211ENST00000486901 HTRA3P83110 453 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms