RNA–Protein interactions for RNA: ENST00000486549.5

USP4-212, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 749 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-212ENST00000486549 VWA2Q5GFL6 755 aa14.01□□□□□ -0.17
USP4-212ENST00000486549 PRAMEF9Q5VWM5 478 aa14.01□□□□□ -0.17
USP4-212ENST00000486549 CPZQ66K79 652 aa14.01□□□□□ -0.17
USP4-212ENST00000486549 WDR93Q6P2C0 686 aa14.01□□□□□ -0.17
USP4-212ENST00000486549 TMIGD1Q6UXZ0 262 aa14.01□□□□□ -0.17
USP4-212ENST00000486549 TIFABQ6ZNK6 161 aa14.01□□□□□ -0.17
USP4-212ENST00000486549 TEX9Q8N6V9 391 aa14.01□□□□□ -0.17
USP4-212ENST00000486549 PTGR2Q8N8N7 351 aaPredicted RBP14.01□□□□□ -0.17
USP4-212ENST00000486549 AMER3Q8N944 861 aa14.01□□□□□ -0.17
USP4-212ENST00000486549 EXD3Q8N9H8 876 aa14.01□□□□□ -0.17
USP4-212ENST00000486549 OR2W6PQ8NHA6 318 aa14.01□□□□□ -0.17
USP4-212ENST00000486549 STT3BQ8TCJ2 826 aa14.01□□□□□ -0.17
USP4-212ENST00000486549 AENQ8WTP8 325 aaKnown RBP14.01□□□□□ -0.17
USP4-212ENST00000486549 THAP4Q8WY91 577 aa14.01□□□□□ -0.17
USP4-212ENST00000486549 MIEF2Q96C03 454 aa14.01□□□□□ -0.17
USP4-212ENST00000486549 PHF21BQ96EK2 531 aa14.01□□□□□ -0.17
USP4-212ENST00000486549 PTCD3Q96EY7 689 aaKnown RBP14.01□□□□□ -0.17
USP4-212ENST00000486549 SPSB2Q99619 263 aa14.01□□□□□ -0.17
USP4-212ENST00000486549 SLC26A1Q9H2B4 701 aa14.01□□□□□ -0.17
USP4-212ENST00000486549 WDR54Q9H977 334 aa14.01□□□□□ -0.17
USP4-212ENST00000486549 ANKHQ9HCJ1 492 aa14.01□□□□□ -0.17
USP4-212ENST00000486549 HCN3Q9P1Z3 774 aa14.01□□□□□ -0.17
USP4-212ENST00000486549 PCSK5Q92824 1860 aa14.01□□□□□ -0.17
USP4-212ENST00000486549 COL6A6A6NMZ7 2263 aa14.01□□□□□ -0.17
USP4-212ENST00000486549 NUP210LQ5VU65 1888 aa14□□□□□ -0.17
USP4-212ENST00000486549 ZNF860A6NHJ4 632 aa14□□□□□ -0.17
USP4-212ENST00000486549 KLK8O60259 260 aa14□□□□□ -0.17
USP4-212ENST00000486549 RDH16O75452 317 aa14□□□□□ -0.17
USP4-212ENST00000486549 DNAJB5O75953 348 aa14□□□□□ -0.17
USP4-212ENST00000486549 SIX3O95343 332 aaPredicted RBP14□□□□□ -0.17
USP4-212ENST00000486549 NSA2O95478 260 aaKnown RBP14□□□□□ -0.17
USP4-212ENST00000486549 B3GALT4O96024 378 aa14□□□□□ -0.17
USP4-212ENST00000486549 ZGLP1P0C6A0 271 aa14□□□□□ -0.17
USP4-212ENST00000486549 ZNF888P0CJ79 500 aaPredicted RBP14□□□□□ -0.17
USP4-212ENST00000486549 PYGBP11216 843 aa14□□□□□ -0.17
USP4-212ENST00000486549 EPB42P16452 691 aa14□□□□□ -0.17
USP4-212ENST00000486549 PWP1Q13610 501 aa14□□□□□ -0.17
USP4-212ENST00000486549 SSPNQ14714 243 aa14□□□□□ -0.17
USP4-212ENST00000486549 TOR1AIP1Q5JTV8 583 aa14□□□□□ -0.17
USP4-212ENST00000486549 EMBQ6PCB8 327 aa14□□□□□ -0.17
USP4-212ENST00000486549 MRGPREQ86SM8 312 aa14□□□□□ -0.17
USP4-212ENST00000486549 MYLK4Q86YV6 388 aaPredicted RBP14□□□□□ -0.17
USP4-212ENST00000486549 TRPV3Q8NET8 790 aa14□□□□□ -0.17
USP4-212ENST00000486549 NT5CQ8TCD5 201 aa14□□□□□ -0.17
USP4-212ENST00000486549 MZB1Q8WU39 189 aa14□□□□□ -0.17
USP4-212ENST00000486549 MRPL57Q9BQC6 102 aaKnown RBP14□□□□□ -0.17
USP4-212ENST00000486549 CRB3Q9BUF7 120 aa14□□□□□ -0.17
USP4-212ENST00000486549 EFCAB11Q9BUY7 163 aa14□□□□□ -0.17
USP4-212ENST00000486549 PARD6BQ9BYG5 372 aa14□□□□□ -0.17
USP4-212ENST00000486549 SEMA4CQ9C0C4 833 aa14□□□□□ -0.17
USP4-212ENST00000486549 SLC25A18Q9H1K4 315 aa14□□□□□ -0.17
USP4-212ENST00000486549 MRPL46Q9H2W6 279 aaKnown RBP14□□□□□ -0.17
USP4-212ENST00000486549 NXT1Q9UKK6 140 aaKnown RBP14□□□□□ -0.17
USP4-212ENST00000486549 NAALAD2Q9Y3Q0 740 aa14□□□□□ -0.17
USP4-212ENST00000486549 MAP4K5Q9Y4K4 846 aa14□□□□□ -0.17
USP4-212ENST00000486549 A0A1W2PPM1 405 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 TLDC2A0PJX2 215 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 ANKDD1BA6NHY2 528 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 VSTM2BA6NLU5 285 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 KLHL18O94889 574 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 KRT15P19012 456 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 CD22P20273 847 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 EEF1DP29692 281 aaKnown RBP13.99□□□□□ -0.17
USP4-212ENST00000486549 RAB8AP61006 207 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 KLC1Q07866 573 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 NFATC3Q12968 1075 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 KCNAB2Q13303 367 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 GTF2H2Q13888 395 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 NAA30Q147X3 362 aaPredicted RBP13.99□□□□□ -0.17
USP4-212ENST00000486549 HERC3Q15034 1050 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 RBBP7Q16576 425 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 DEFB134Q4QY38 66 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 PAGE2BQ5JRK9 111 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 ADNP2Q6IQ32 1131 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 GTF2H2CQ6P1K8 395 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 ABHD13Q7L211 337 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 GOLGA7Q7Z5G4 137 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 PPP1R32Q7Z5V6 425 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 PDSS2Q86YH6 399 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 CYP4X1Q8N118 509 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 TTLQ8NG68 377 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 CREB3L4Q8TEY5 395 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 TRIM55Q9BYV6 548 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 EHD1Q9H4M9 534 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 KLHL31Q9H511 634 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 MKKSQ9NPJ1 570 aaPredicted RBP13.99□□□□□ -0.17
USP4-212ENST00000486549 TMEM216Q9P0N5 145 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 TMCO1Q9UM00 188 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 SLC22A7Q9Y694 548 aa13.99□□□□□ -0.17
USP4-212ENST00000486549 MED13Q9UHV7 2174 aa13.98□□□□□ -0.17
USP4-212ENST00000486549 H0YIG0 161 aa13.98□□□□□ -0.17
USP4-212ENST00000486549 PEX12O00623 359 aa13.98□□□□□ -0.17
USP4-212ENST00000486549 PCNAP12004 261 aa13.98□□□□□ -0.17
USP4-212ENST00000486549 ALOX12P18054 663 aa13.98□□□□□ -0.17
USP4-212ENST00000486549 ARL1P40616 181 aaPredicted RBP13.98□□□□□ -0.17
USP4-212ENST00000486549 OLR1P78380 273 aa13.98□□□□□ -0.17
USP4-212ENST00000486549 IFFO1Q0D2I5 559 aa13.98□□□□□ -0.17
USP4-212ENST00000486549 HYAL2Q12891 473 aa13.98□□□□□ -0.17
USP4-212ENST00000486549 LAPTM5Q13571 262 aa13.98□□□□□ -0.17
USP4-212ENST00000486549 PCBP2Q15366 365 aaKnown RBP eCLIP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms