RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 FAM189A1O60320 539 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 ATP2C2O75185 946 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 STC2O76061 302 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 ZWINTO95229 277 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 LUC7L3O95232 432 aaKnown RBP3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 HMGN1P05114 100 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 IL6P05231 212 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 KRT16P08779 473 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 STAG3L2P0CL84 134 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 T-ENOLP0DO92 83 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 CTRB1P17538 263 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 EGR1P18146 543 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 GNAZP19086 355 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 MSR1P21757 451 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 PRKCHP24723 683 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 SERPINA4P29622 427 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 MC5RP33032 325 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 PHBP35232 272 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 CDKN2BP42772 138 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 MAGEA6P43360 314 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 CEBPDP49716 269 aaPredicted RBP3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 ARHGDIAP52565 204 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 SMSP52788 366 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 AIF1P55008 147 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 CDH15P55291 814 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 SLC18A2Q05940 514 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 MERTKQ12866 999 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 ILF2Q12905 390 aaKnown RBP3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 MALLQ13021 153 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 OLIG2Q13516 323 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 RFTN1Q14699 578 aaPredicted RBP3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 SPCS2Q15005 226 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 ELAVL1Q15717 326 aaKnown RBP3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 FAM187BQ17R55 369 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 SYT16Q17RD7 645 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 KLHL38Q2WGJ6 581 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 P3H1Q32P28 736 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 LEXMQ3ZCV2 418 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 SLC36A3Q495N2 470 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 DNAL1Q4LDG9 190 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 MPPE1Q53F39 396 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 TFDP3Q5H9I0 405 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 PITRM1Q5JRX3 1037 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 AARS2Q5JTZ9 985 aaKnown RBP3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 TMEM31Q5JXX7 168 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 CLEC6AQ6EIG7 209 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 CTRB2Q6GPI1 263 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 JADE1Q6IE81 842 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 OR6B2Q6IFH4 312 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 SULT1C3Q6IMI6 304 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 KIAA1161Q6NSJ0 714 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 METTL2BQ6P1Q9 378 aaKnown RBP3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 SH2D5Q6ZV89 423 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 USP50Q70EL3 339 aaPredicted RBP3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 BMP8AQ7Z5Y6 402 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 PHLDB2Q86SQ0 1253 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 CCDC25Q86WR0 208 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 PHYKPLQ8IUZ5 450 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 CCDC60Q8IWA6 550 aaPredicted RBP3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 PM20D2Q8IYS1 436 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 MINDY1Q8N5J2 469 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 IL17RCQ8NAC3 791 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 FNDC5Q8NAU1 212 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 TMEM35BQ8NCS4 154 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 MCUQ8NE86 351 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 LRRC20Q8TCA0 184 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 NSMCE1Q8WV22 266 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 ATG4AQ8WYN0 398 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 BCL2L2Q92843 193 aaPredicted RBP3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 STAMBPL1Q96FJ0 436 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 PGAM5Q96HS1 289 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 CEP170P1Q96L14 293 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 GAD1Q99259 594 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 EGFL8Q99944 293 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 CCM2Q9BSQ5 444 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 SYT17Q9BSW7 474 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 SOX7Q9BT81 388 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 SPATA16Q9BXB7 569 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 PITPNM3Q9BZ71 974 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 GLIS2Q9BZE0 524 aaPredicted RBP3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 ZNF350Q9GZX5 532 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 PCDHAC1Q9H158 963 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 POLR3FQ9H1D9 316 aaPredicted RBP3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 LHX5Q9H2C1 402 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 OSGEPL1Q9H4B0 414 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 TRABDQ9H4I3 376 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 RNPEPL1Q9HAU8 725 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 APOBEC3GQ9HC16 384 aaKnown RBP3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 NT5MQ9NPB1 228 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 KCNK9Q9NPC2 374 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 IL23AQ9NPF7 189 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 HEYLQ9NQ87 328 aaPredicted RBP3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 ZDHHC7Q9NXF8 308 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 ING3Q9NXR8 418 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 MRPL39Q9NYK5 338 aaKnown RBP3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 ERAP1Q9NZ08 941 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 PSMC3IPQ9P2W1 217 aaPredicted RBP3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 PEF1Q9UBV8 284 aaKnown RBP3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 DNAJB4Q9UDY4 337 aa3.89□□□□□ -1.79
PRPF38B-205ENST00000485810 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms