RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 DOC2AQ14183 400 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 SLBPQ14493 270 aaKnown RBP eCLIP7.89□□□□□ -1.15
SF3A1-208ENST00000485618 PRTGQ2VWP7 1150 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 TMEM35AQ53FP2 167 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 ZNF678Q5SXM1 525 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 AGBL2Q5U5Z8 902 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 HHATQ5VTY9 493 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 SH2D5Q6ZV89 423 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 TTLL10Q6ZVT0 673 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 GOLGA7Q7Z5G4 137 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 ZFAND4Q86XD8 727 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 NUDCD3Q8IVD9 361 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 TRIM42Q8IWZ5 723 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 GALNT6Q8NCL4 622 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 ARMC2Q8NEN0 867 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 TCP10LQ8TDR4 215 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 CCT6BQ92526 530 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 ESAMQ96AP7 390 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 L3HYPDHQ96EM0 354 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 CNDP1Q96KN2 507 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 CCNL2Q96S94 520 aaPredicted RBP7.89□□□□□ -1.15
SF3A1-208ENST00000485618 TMEM79Q9BSE2 394 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 NTMT1Q9BV86 223 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 C1QTNF3Q9BXJ4 246 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 SPRTNQ9H040 489 aaPredicted RBP7.89□□□□□ -1.15
SF3A1-208ENST00000485618 RHBGQ9H310 441 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 ELOVL6Q9H5J4 265 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 NOL11Q9H8H0 719 aaKnown RBP7.89□□□□□ -1.15
SF3A1-208ENST00000485618 GPN2Q9H9Y4 310 aaPredicted RBP7.89□□□□□ -1.15
SF3A1-208ENST00000485618 APMAPQ9HDC9 416 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 LHX9Q9NQ69 397 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 OXSMQ9NWU1 459 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 GEMIN8Q9NWZ8 242 aaKnown RBP7.89□□□□□ -1.15
SF3A1-208ENST00000485618 PSD3Q9NYI0 1048 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 AHSPQ9NZD4 102 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 FOXJ2Q9P0K8 574 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 IFT80Q9P2H3 777 aaPredicted RBP7.89□□□□□ -1.15
SF3A1-208ENST00000485618 COPG2Q9UBF2 871 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 NXT1Q9UKK6 140 aaKnown RBP7.89□□□□□ -1.15
SF3A1-208ENST00000485618 PCDHGA4Q9Y5G9 962 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 SLC22A7Q9Y694 548 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 SPACA6W5XKT8 324 aa7.89□□□□□ -1.15
SF3A1-208ENST00000485618 HEATR5BQ9P2D3 2071 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 UQCRHLA0A096LP55 91 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 LOC105369274A0A096LPK9 316 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 LOC102723532A0A0G2JNH3 316 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 FEZF1A0PJY2 475 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 HMGB1P1B2RPK0 211 aaPredicted RBP7.88□□□□□ -1.15
SF3A1-208ENST00000485618 H0YIG0 161 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 H0YIV9 168 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 J3QKU1 62 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 PCDH17O14917 1159 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 BIRC5O15392 142 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 NDUFS4O43181 175 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 ATP8B1O43520 1251 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 SPAG7O75391 227 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 SIX3O95343 332 aaPredicted RBP7.88□□□□□ -1.15
SF3A1-208ENST00000485618 RECKO95980 971 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 IGHEP01854 428 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 UQCRHP07919 91 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 RAB40ALP0C0E4 278 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 PCNAP12004 261 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 TCN2P20062 427 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 GRK2P25098 689 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 GMPRP36959 345 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 BCL6P41182 706 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 ARFIP1P53367 373 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 NAGLUP54802 743 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 ZXDCQ2QGD7 858 aaPredicted RBP7.88□□□□□ -1.15
SF3A1-208ENST00000485618 DEFB110Q30KQ9 67 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 C18orf21Q32NC0 220 aaPredicted RBP7.88□□□□□ -1.15
SF3A1-208ENST00000485618 NKAIN1Q4KMZ8 207 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 ARHGAP40Q5TG30 622 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 FRMPD2BQ6IN97 320 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 GRHL2Q6ISB3 625 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 TRIM40Q6P9F5 258 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 PCSK4Q6UW60 755 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 GPRIN3Q6ZVF9 776 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 EXOC3L1Q86VI1 746 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 DSELQ8IZU8 1212 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 OR4N4Q8N0Y3 316 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 TMEM151AQ8N4L1 468 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 AFAP1L2Q8N4X5 818 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 L3MBTL4Q8NA19 623 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 NT5CQ8TCD5 201 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 ZNF483Q8TF39 744 aaPredicted RBP7.88□□□□□ -1.15
SF3A1-208ENST00000485618 NKD1Q969G9 470 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 FKBP10Q96AY3 582 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 NACC2Q96BF6 587 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 CMTM7Q96FZ5 175 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 KCNC2Q96PR1 638 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 FAM111AQ96PZ2 611 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 ZNF382Q96SR6 550 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 YIPF2Q9BWQ6 316 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 SLC29A3Q9BZD2 475 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 TMBIM4Q9HC24 238 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 CPNE5Q9HCH3 593 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 ZNF304Q9HCX3 659 aa7.88□□□□□ -1.15
SF3A1-208ENST00000485618 SEMA4BQ9NPR2 832 aaPredicted RBP7.88□□□□□ -1.15
SF3A1-208ENST00000485618 PCTPQ9UKL6 214 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms