RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 TMEM102Q8N9M5 508 aaPredicted RBP7.43□□□□□ -1.22
MACF1-220ENST00000485063 KCT2Q8NC54 265 aa7.43□□□□□ -1.22
MACF1-220ENST00000485063 ZCCHC10Q8TBK6 192 aa7.43□□□□□ -1.22
MACF1-220ENST00000485063 STT3BQ8TCJ2 826 aa7.43□□□□□ -1.22
MACF1-220ENST00000485063 ACMSDQ8TDX5 336 aa7.43□□□□□ -1.22
MACF1-220ENST00000485063 UBTD2Q8WUN7 234 aa7.43□□□□□ -1.22
MACF1-220ENST00000485063 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.43□□□□□ -1.22
MACF1-220ENST00000485063 ATP6V1E2Q96A05 226 aa7.43□□□□□ -1.22
MACF1-220ENST00000485063 SEC16BQ96JE7 1060 aa7.43□□□□□ -1.22
MACF1-220ENST00000485063 FAR2Q96K12 515 aa7.43□□□□□ -1.22
MACF1-220ENST00000485063 C10orf90Q96M02 699 aa7.43□□□□□ -1.22
MACF1-220ENST00000485063 MRPL57Q9BQC6 102 aaKnown RBP7.43□□□□□ -1.22
MACF1-220ENST00000485063 CRB3Q9BUF7 120 aa7.43□□□□□ -1.22
MACF1-220ENST00000485063 MRPL46Q9H2W6 279 aaKnown RBP7.43□□□□□ -1.22
MACF1-220ENST00000485063 SOX17Q9H6I2 414 aaPredicted RBP7.43□□□□□ -1.22
MACF1-220ENST00000485063 NT5DC2Q9H857 520 aa7.43□□□□□ -1.22
MACF1-220ENST00000485063 SEMA3GQ9NS98 782 aa7.43□□□□□ -1.22
MACF1-220ENST00000485063 C14orf105Q9NVL8 296 aa7.43□□□□□ -1.22
MACF1-220ENST00000485063 TRPC4Q9UBN4 977 aa7.43□□□□□ -1.22
MACF1-220ENST00000485063 DCDC2Q9UHG0 476 aa7.43□□□□□ -1.22
MACF1-220ENST00000485063 TUBD1Q9UJT1 453 aa7.43□□□□□ -1.22
MACF1-220ENST00000485063 MAP4K5Q9Y4K4 846 aa7.43□□□□□ -1.22
MACF1-220ENST00000485063 KCNMB2Q9Y691 235 aa7.43□□□□□ -1.22
MACF1-220ENST00000485063 SLC22A7Q9Y694 548 aa7.43□□□□□ -1.22
MACF1-220ENST00000485063 ASPMQ8IZT6 3477 aa7.43□□□□□ -1.22
MACF1-220ENST00000485063 FER1L5A0AVI2 2057 aa7.43□□□□□ -1.22
MACF1-220ENST00000485063 USP24Q9UPU5 2620 aa7.43□□□□□ -1.22
MACF1-220ENST00000485063 NUP210LQ5VU65 1888 aa7.43□□□□□ -1.22
MACF1-220ENST00000485063 FREM2Q5SZK8 3169 aa7.43□□□□□ -1.22
MACF1-220ENST00000485063 SCN3AQ9NY46 2000 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 DMXL2Q8TDJ6 3036 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 AHCTF1Q8WYP5 2266 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 LOC100996750A0A140TA64 210 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 ARGFXA6NJG6 315 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 SMIM23A6NLE4 172 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 STX16-NPEPL1H3BU86 382 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 STX16O14662 325 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 PCDH17O14917 1159 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 FOXS1O43638 330 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 CDH16O75309 829 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 RFPL1O75677 317 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 STATHP02808 62 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 HEXBP07686 556 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 SERPINA6P08185 405 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 GSTA1P08263 222 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 FURINP09958 794 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 ZGLP1P0C6A0 271 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 FAM87AP0C7U9 286 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 MTHFD2P13995 350 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 ALOX12P18054 663 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 IL1RNP18510 177 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 IL10P22301 178 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 MMP11P24347 488 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 VARSP26640 1264 aaKnown RBP7.42□□□□□ -1.22
MACF1-220ENST00000485063 GCAP28676 217 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 SERPINB1P30740 379 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 DEKP35659 375 aaKnown RBP7.42□□□□□ -1.22
MACF1-220ENST00000485063 KCNC1P48547 511 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 NFKB2Q00653 900 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 TGM3Q08188 693 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 KCNAB2Q13303 367 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 GTF2H2Q13888 395 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 DOC2AQ14183 400 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 LY6DQ14210 128 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 NAA30Q147X3 362 aaPredicted RBP7.42□□□□□ -1.22
MACF1-220ENST00000485063 TBCCQ15814 346 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 RBBP7Q16576 425 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 ERCC6LQ2NKX8 1250 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 LINC00303Q3SY05 128 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 IRAK1BP1Q5VVH5 260 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 LIPJQ5W064 366 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 GTF2H2CQ6P1K8 395 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 MED27Q6P2C8 311 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 TRIM40Q6P9F5 258 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 COX15Q7KZN9 410 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 TDRPQ86YL5 185 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 MYLK4Q86YV6 388 aaPredicted RBP7.42□□□□□ -1.22
MACF1-220ENST00000485063 APLFQ8IW19 511 aaPredicted RBP7.42□□□□□ -1.22
MACF1-220ENST00000485063 PLD6Q8N2A8 252 aaKnown RBP7.42□□□□□ -1.22
MACF1-220ENST00000485063 RIBC1Q8N443 379 aaPredicted RBP7.42□□□□□ -1.22
MACF1-220ENST00000485063 CLEC1AQ8NC01 280 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 ZNF740Q8NDX6 193 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 OR9A4Q8NGU2 314 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 NT5CQ8TCD5 201 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 ADAMTS17Q8TE56 1095 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 METTL21AQ8WXB1 218 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 REPS1Q96D71 796 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 PHF21BQ96EK2 531 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 GPR78Q96P69 363 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 MACROD1Q9BQ69 325 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 KRTAP4-6Q9BYQ5 205 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 ING2Q9H160 280 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 ACTR8Q9H981 624 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 SLC22A11Q9NSA0 550 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 GEMIN8Q9NWZ8 242 aaKnown RBP7.42□□□□□ -1.22
MACF1-220ENST00000485063 XPR1Q9UBH6 696 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 CTSFQ9UBX1 484 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.42□□□□□ -1.22
MACF1-220ENST00000485063 ADGRE2Q9UHX3 823 aa7.42□□□□□ -1.22
MACF1-220ENST00000485063 NAALAD2Q9Y3Q0 740 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms