RNA–Protein interactions for RNA: ENST00000484555.1

PABPC4-215, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-215	ENST00000484555	ST6GALNAC2	Q9UJ37	374 aa		11.65	□□□□□ -0.54
PABPC4-215	ENST00000484555	RPH3A	Q9Y2J0	694 aa	Predicted RBP	11.65	□□□□□ -0.54
PABPC4-215	ENST00000484555	SLC22A7	Q9Y694	548 aa		11.65	□□□□□ -0.54
PABPC4-215	ENST00000484555	DUSP10	Q9Y6W6	482 aa		11.65	□□□□□ -0.54
PABPC4-215	ENST00000484555	INTS1	Q8N201	2190 aa	Known RBP	11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	PHF3	Q92576	2039 aa	Known RBP	11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	TCRBV7S2A1N4T	A0A589	114 aa		11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	FEZF1	A0PJY2	475 aa		11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	GFY	I3L273	518 aa		11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	HS6ST1	O60243	411 aa		11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	CTAG2	O75638	210 aa		11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	ZWINT	O95229	277 aa		11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	DRD2	P14416	443 aa		11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	ARNT	P27540	789 aa		11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	NMBR	P28336	390 aa		11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	CYLC1	P35663	651 aa	Predicted RBP	11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	SKIV2L2	P42285	1042 aa	Known RBP	11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	ITGA8	P53708	1063 aa		11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	MEF2A	Q02078	507 aa	Predicted RBP	11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	MYBPH	Q13203	477 aa		11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	KCNJ11	Q14654	390 aa		11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	MEI1	Q5TIA1	1274 aa		11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	MRNIP	Q6NTE8	343 aa		11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	CCDC71	Q8IV32	467 aa	Predicted RBP	11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	REXO1L1P	Q8IX06	675 aa		11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	RPRML	Q8N4K4	120 aa		11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	MYRIP	Q8NFW9	859 aa		11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	ASB11	Q8WXH4	323 aa		11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	TSLP	Q969D9	159 aa		11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	SEC16B	Q96JE7	1060 aa		11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	MACROD1	Q9BQ69	325 aa		11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	IL22	Q9GZX6	179 aa		11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	GSX1	Q9H4S2	264 aa	Predicted RBP	11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	RAB6B	Q9NRW1	208 aa		11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	DNAJB12	Q9NXW2	375 aa	Known RBP	11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	KLHL42	Q9P2K6	505 aa		11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	TSR3	Q9UJK0	312 aa	Known RBP	11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	MAP1A	P78559	2803 aa	Predicted RBP	11.64	□□□□□ -0.55
PABPC4-215	ENST00000484555	GRID2IP	A4D2P6	1211 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	TMEM200C	A6NKL6	621 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	MIF4GD	A9UHW6	222 aa	Known RBP	11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	PFDN6	O15212	129 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	LIAS	O43766	372 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	PEX1	O43933	1283 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	RDH16	O75452	317 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	STATH	P02808	62 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	APRT	P07741	180 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	MPC1L	P0DKB6	136 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	IMPA1	P29218	277 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	NPY2R	P49146	381 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	CLCN7	P51798	805 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	NAP1L1	P55209	391 aa	Known RBP	11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	NUP107	P57740	925 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	PMPCA	Q10713	525 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	FOXD4	Q12950	439 aa	Predicted RBP	11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	THEMIS2	Q5TEJ8	643 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	KIAA0408	Q6ZU52	694 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	ASPG	Q86U10	573 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	AFAP1L2	Q8N4X5	818 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	UBL4B	Q8N7F7	174 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	KCT2	Q8NC54	265 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	NFAM1	Q8NET5	270 aa	Predicted RBP	11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	FAM136A	Q96C01	138 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	PEX11G	Q96HA9	241 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	CCDC138	Q96M89	665 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	KIFC1	Q9BW19	673 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	ZNF358	Q9NW07	568 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	AMFR	Q9UKV5	643 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	NAALAD2	Q9Y3Q0	740 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	L3MBTL1	Q9Y468	752 aa		11.63	□□□□□ -0.55
PABPC4-215	ENST00000484555	SCN3A	Q9NY46	2000 aa		11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	FAM237B	A0A1B0GVD1	139 aa		11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	SAGE2P	A6NJ88	616 aa		11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	AP3B1	O00203	1094 aa		11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	FCHO1	O14526	889 aa		11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	ZBTB14	O43829	449 aa		11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	LCMT2	O60294	686 aa	Known RBP	11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	CDC40	O60508	579 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	CDC123	O75794	336 aa	Predicted RBP	11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	VAPB	O95292	243 aa		11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	FH	P07954	510 aa		11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	SESN2	P58004	480 aa	Predicted RBP	11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	CRADD	P78560	199 aa		11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	HERC3	Q15034	1050 aa		11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	TTLL9	Q3SXZ7	439 aa		11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	PAOX	Q6QHF9	649 aa		11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	CYHR1	Q6ZMK1	362 aa		11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	QSOX2	Q6ZRP7	698 aa		11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	SLC26A11	Q86WA9	606 aa		11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	OR52N2	Q8NGI0	321 aa		11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	SLC13A3	Q8WWT9	602 aa		11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	ATG4A	Q8WYN0	398 aa		11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	TBC1D20	Q96BZ9	403 aa		11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	MBD6	Q96DN6	1003 aa		11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	ALPK1	Q96QP1	1244 aa		11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	SARG	Q9BW04	601 aa		11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	PCBD2	Q9H0N5	130 aa		11.62	□□□□□ -0.55
PABPC4-215	ENST00000484555	EIF2B3	Q9NR50	452 aa	Known RBP	11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms