RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 C7orf26Q96N11 449 aa13.47□□□□□ -0.25
SRSF6-202ENST00000483871 F2RL3Q96RI0 385 aa13.47□□□□□ -0.25
SRSF6-202ENST00000483871 CCDC134Q9H6E4 229 aa13.47□□□□□ -0.25
SRSF6-202ENST00000483871 DMRT3Q9NQL9 472 aa13.47□□□□□ -0.25
SRSF6-202ENST00000483871 SLC39A1Q9NY26 324 aa13.47□□□□□ -0.25
SRSF6-202ENST00000483871 PISDQ9UG56 409 aa13.47□□□□□ -0.25
SRSF6-202ENST00000483871 MRPS2Q9Y399 296 aaKnown RBP13.47□□□□□ -0.25
SRSF6-202ENST00000483871 LRIT2A6NDA9 550 aa13.46□□□□□ -0.26
SRSF6-202ENST00000483871 C4orf51C9J302 202 aa13.46□□□□□ -0.26
SRSF6-202ENST00000483871 PIP5K1BO14986 540 aa13.46□□□□□ -0.26
SRSF6-202ENST00000483871 CLEC3AO75596 197 aa13.46□□□□□ -0.26
SRSF6-202ENST00000483871 MED26O95402 600 aa13.46□□□□□ -0.26
SRSF6-202ENST00000483871 VIMP08670 466 aaKnown RBP13.46□□□□□ -0.26
SRSF6-202ENST00000483871 JMJD7P0C870 316 aa13.46□□□□□ -0.26
SRSF6-202ENST00000483871 SPINK2P20155 84 aa13.46□□□□□ -0.26
SRSF6-202ENST00000483871 HOXD11P31277 338 aaPredicted RBP13.46□□□□□ -0.26
SRSF6-202ENST00000483871 ITGA1P56199 1179 aa13.46□□□□□ -0.26
SRSF6-202ENST00000483871 HMGCS1Q01581 520 aa13.46□□□□□ -0.26
SRSF6-202ENST00000483871 FOXC1Q12948 553 aa13.46□□□□□ -0.26
SRSF6-202ENST00000483871 PDCD2Q16342 344 aaPredicted RBP13.46□□□□□ -0.26
SRSF6-202ENST00000483871 PRTGQ2VWP7 1150 aa13.46□□□□□ -0.26
SRSF6-202ENST00000483871 PWWP2BQ6NUJ5 590 aa13.46□□□□□ -0.26
SRSF6-202ENST00000483871 PPP1R3BQ86XI6 285 aa13.46□□□□□ -0.26
SRSF6-202ENST00000483871 WDR36Q8NI36 951 aaKnown RBP13.46□□□□□ -0.26
SRSF6-202ENST00000483871 PIWIL2Q8TC59 973 aaKnown RBP13.46□□□□□ -0.26
SRSF6-202ENST00000483871 THOC1Q96FV9 657 aaKnown RBP13.46□□□□□ -0.26
SRSF6-202ENST00000483871 C3orf30Q96M34 536 aa13.46□□□□□ -0.26
SRSF6-202ENST00000483871 MS4A8Q9BY19 250 aa13.46□□□□□ -0.26
SRSF6-202ENST00000483871 FANCEQ9HB96 536 aa13.46□□□□□ -0.26
SRSF6-202ENST00000483871 FBXO8Q9NRD0 319 aa13.46□□□□□ -0.26
SRSF6-202ENST00000483871 RARRES3Q9UL19 164 aa13.46□□□□□ -0.26
SRSF6-202ENST00000483871 TSC22D4Q9Y3Q8 395 aa13.46□□□□□ -0.26
SRSF6-202ENST00000483871 B3GALT1Q9Y5Z6 326 aa13.46□□□□□ -0.26
SRSF6-202ENST00000483871 SPTBN4Q9H254 2564 aa13.46□□□□□ -0.26
SRSF6-202ENST00000483871 SEC16AO15027 2179 aa13.45□□□□□ -0.26
SRSF6-202ENST00000483871 A0A0G2JN53 185 aa13.45□□□□□ -0.26
SRSF6-202ENST00000483871 ATP6AP2A0A1C7CYW4 349 aa13.45□□□□□ -0.26
SRSF6-202ENST00000483871 FOXE1O00358 373 aaPredicted RBP13.45□□□□□ -0.26
SRSF6-202ENST00000483871 ZNF749O43361 778 aa13.45□□□□□ -0.26
SRSF6-202ENST00000483871 EDF1O60869 148 aaKnown RBP13.45□□□□□ -0.26
SRSF6-202ENST00000483871 ATP6AP2O75787 350 aa13.45□□□□□ -0.26
SRSF6-202ENST00000483871 SNUPNO95149 360 aaKnown RBP13.45□□□□□ -0.26
SRSF6-202ENST00000483871 SERPINA6P08185 405 aa13.45□□□□□ -0.26
SRSF6-202ENST00000483871 SLC35G6P0C7Q6 338 aa13.45□□□□□ -0.26
SRSF6-202ENST00000483871 PIK3CBP42338 1070 aa13.45□□□□□ -0.26
SRSF6-202ENST00000483871 RAB8AP61006 207 aa13.45□□□□□ -0.26
SRSF6-202ENST00000483871 BTKQ06187 659 aa13.45□□□□□ -0.26
SRSF6-202ENST00000483871 SF3A3Q12874 501 aaKnown RBP eCLIP13.45□□□□□ -0.265e-18■■■□□ 16.3
SRSF6-202ENST00000483871 PWP1Q13610 501 aa13.45□□□□□ -0.26
SRSF6-202ENST00000483871 TCTE1Q5JU00 501 aa13.45□□□□□ -0.26
SRSF6-202ENST00000483871 VWA5B1Q5TIE3 1220 aa13.45□□□□□ -0.26
SRSF6-202ENST00000483871 Q6ZSR9 355 aa13.45□□□□□ -0.26
SRSF6-202ENST00000483871 WDR75Q8IWA0 830 aaKnown RBP13.45□□□□□ -0.26
SRSF6-202ENST00000483871 DDIASQ8IXT1 998 aa13.45□□□□□ -0.26
SRSF6-202ENST00000483871 LRRC34Q8IZ02 419 aa13.45□□□□□ -0.26
SRSF6-202ENST00000483871 GPR135Q8IZ08 494 aa13.45□□□□□ -0.26
SRSF6-202ENST00000483871 ARHGEF39Q8N4T4 335 aa13.45□□□□□ -0.26
SRSF6-202ENST00000483871 OR2T11Q8NH01 316 aa13.45□□□□□ -0.26
SRSF6-202ENST00000483871 ZCCHC10Q8TBK6 192 aa13.45□□□□□ -0.26
SRSF6-202ENST00000483871 NT5CQ8TCD5 201 aa13.45□□□□□ -0.26
SRSF6-202ENST00000483871 ZNF317Q96PQ6 595 aaPredicted RBP13.45□□□□□ -0.26
SRSF6-202ENST00000483871 NUF2Q9BZD4 464 aa13.45□□□□□ -0.26
SRSF6-202ENST00000483871 ACPTQ9BZG2 426 aa13.45□□□□□ -0.26
SRSF6-202ENST00000483871 SLC6A16Q9GZN6 736 aa13.45□□□□□ -0.26
SRSF6-202ENST00000483871 FGFR1OP2Q9NVK5 253 aa13.45□□□□□ -0.26
SRSF6-202ENST00000483871 CELSR3Q9NYQ7 3312 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 B4E171 279 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 RTCAO00442 366 aaKnown RBP13.44□□□□□ -0.26
SRSF6-202ENST00000483871 ZSCAN9O15535 394 aaPredicted RBP13.44□□□□□ -0.26
SRSF6-202ENST00000483871 NTRK1P04629 796 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 ATXN8OSP0DMR3 200 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 FGF5P12034 268 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 ZNF28P17035 718 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 TSPAN7P41732 249 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 PLA2G16P53816 162 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 SEC24CP53992 1094 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 GNGT1P63211 74 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 RGS1Q08116 209 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 EIF3IQ13347 325 aaKnown RBP13.44□□□□□ -0.26
SRSF6-202ENST00000483871 IL11RAQ14626 422 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 TOR1AIP1Q5JTV8 583 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 DEPDC1Q5TB30 811 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 TMEM214Q6NUQ4 689 aaKnown RBP13.44□□□□□ -0.26
SRSF6-202ENST00000483871 PRSS41Q7RTY9 318 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 MAVSQ7Z434 540 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 SLC38A9Q8NBW4 561 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 MS4A6EQ96DS6 147 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 CMTM7Q96FZ5 175 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 C10orf90Q96M02 699 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 SORBS1Q9BX66 1292 aaKnown RBP13.44□□□□□ -0.26
SRSF6-202ENST00000483871 REXO4Q9GZR2 422 aaKnown RBP13.44□□□□□ -0.26
SRSF6-202ENST00000483871 DHCR7Q9UBM7 475 aaKnown RBP13.44□□□□□ -0.26
SRSF6-202ENST00000483871 GIMAP2Q9UG22 337 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 ADGRE2Q9UHX3 823 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 SLC12A4Q9UP95 1085 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 CCL27Q9Y4X3 112 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 HYKKA2RU49 373 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 FITM1A5D6W6 292 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 ZNF195O14628 629 aa13.44□□□□□ -0.26
SRSF6-202ENST00000483871 TNFSF15O95150 251 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms