RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 K7ESF4 209 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 SAP18O00422 153 aaKnown RBP13.44□□□□□ -0.26
CLK3-204ENST00000483723 PLPP1O14494 284 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 YY2O15391 372 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 CAPNS1P04632 268 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 KLK1P06870 262 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 LAMP1P11279 417 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 ATP6V1B2P21281 511 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 CD38P28907 300 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 TPP2P29144 1249 aaPredicted RBP13.44□□□□□ -0.26
CLK3-204ENST00000483723 PLIN5Q00G26 463 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 CYP4F3Q08477 520 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 KIR2DS3Q14952 304 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 TCEA2Q15560 299 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 DUOXA1Q1HG43 343 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 HKDC1Q2TB90 917 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 PRRT3Q5FWE3 981 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 CPTPQ5TA50 214 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 KIAA1614Q5VZ46 1190 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 C1orf216Q8TAB5 229 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 SNX19Q92543 992 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 SLC22A18Q96BI1 424 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 MIEF2Q96C03 454 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 MTERF3Q96E29 417 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 CCDC115Q96NT0 180 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 F2RL3Q96RI0 385 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 PRPF18Q99633 342 aaKnown RBP13.44□□□□□ -0.26
CLK3-204ENST00000483723 KCTD14Q9BQ13 255 aaPredicted RBP13.44□□□□□ -0.26
CLK3-204ENST00000483723 CPPED1Q9BRF8 314 aaPredicted RBP13.44□□□□□ -0.26
CLK3-204ENST00000483723 DPH7Q9BTV6 452 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 DUSP26Q9BV47 211 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 SRMSQ9H3Y6 488 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 AASDHPPTQ9NRN7 309 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 C6orf203Q9P0P8 240 aaPredicted RBP13.44□□□□□ -0.26
CLK3-204ENST00000483723 BTNL2Q9UIR0 455 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 ADAM29Q9UKF5 820 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 C15orf41Q9Y2V0 281 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 SNX13Q9Y5W8 968 aa13.44□□□□□ -0.26
CLK3-204ENST00000483723 EML5Q05BV3 1969 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 EYSQ5T1H1 3165 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 FAM221BA6H8Z2 402 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 ISM1B1AKI9 464 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 TNFSF14O43557 240 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 STAMBPO95630 424 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 CELA2BP08218 269 aaPredicted RBP13.43□□□□□ -0.26
CLK3-204ENST00000483723 FURINP09958 794 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 SLC7A1P30825 629 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 HPCAL1P37235 193 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 RPL3P39023 403 aaKnown RBP13.43□□□□□ -0.26
CLK3-204ENST00000483723 BCL6P41182 706 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 CDKN2CP42773 168 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 CXCL12P48061 93 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 GZMMP51124 257 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 ARFIP1P53367 373 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 ATXN3P54252 364 aaPredicted RBP13.43□□□□□ -0.26
CLK3-204ENST00000483723 SESN3P58005 492 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 MTPNP58546 118 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 RACK1P63244 317 aaKnown RBP13.43□□□□□ -0.26
CLK3-204ENST00000483723 LRRC74AQ0VAA2 488 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 ADPRMQ3LIE5 342 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 GTDC1Q4AE62 458 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 ZNF542PQ5EBM4 170 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 SLC36A4Q6YBV0 504 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 IKBIPQ70UQ0 350 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 R3HCC1LQ7Z5L2 792 aaKnown RBP13.43□□□□□ -0.26
CLK3-204ENST00000483723 UBE3DQ7Z6J8 389 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 PAQR7Q86WK9 346 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 CALHM3Q86XJ0 350 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 PROSER1Q86XN7 944 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 TMEM126BQ8IUX1 230 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 FAM20CQ8IXL6 584 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 NAGSQ8N159 534 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 PQLC1Q8N2U9 271 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 JPH3Q8WXH2 748 aaPredicted RBP13.43□□□□□ -0.26
CLK3-204ENST00000483723 NELL1Q92832 810 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 SLCO4A1Q96BD0 722 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 GBP5Q96PP8 586 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 BHLHE41Q9C0J9 482 aaPredicted RBP13.43□□□□□ -0.26
CLK3-204ENST00000483723 AICDAQ9GZX7 198 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 IKZF5Q9H5V7 419 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 LHX9Q9NQ69 397 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 CPNE7Q9UBL6 633 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 SIT1Q9Y3P8 196 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 AP1M2Q9Y6Q5 423 aa13.43□□□□□ -0.26
CLK3-204ENST00000483723 SNRNP200O75643 2136 aaKnown RBP13.43□□□□□ -0.26
CLK3-204ENST00000483723 LRIT2A6NDA9 550 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 RFXANKO14593 260 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 ARPC2O15144 300 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 AXIN1O15169 862 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 TBX19O60806 448 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 B3GALT4O96024 378 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 VIPP01282 170 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 CSF2P04141 144 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 ZCCHC18P0CG32 403 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 CTSEP14091 401 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 GRK3P35626 688 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 GSTM5P46439 218 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 OR4D2P58180 307 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 C2orf80Q0P641 193 aa13.42□□□□□ -0.26
CLK3-204ENST00000483723 HYAL2Q12891 473 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms