RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 TTLQ8NG68 377 aa16.98■□□□□ 0.31
CPNE1-224ENST00000483359 CREB3L4Q8TEY5 395 aa16.98■□□□□ 0.31
CPNE1-224ENST00000483359 NAF1Q96HR8 494 aaKnown RBP16.98■□□□□ 0.31
CPNE1-224ENST00000483359 CNDP1Q96KN2 507 aa16.98■□□□□ 0.31
CPNE1-224ENST00000483359 PITHD1Q9GZP4 211 aaPredicted RBP16.98■□□□□ 0.31
CPNE1-224ENST00000483359 ELOVL6Q9H5J4 265 aa16.98■□□□□ 0.31
CPNE1-224ENST00000483359 NT5DC2Q9H857 520 aa16.98■□□□□ 0.31
CPNE1-224ENST00000483359 FARSBQ9NSD9 589 aaKnown RBP16.98■□□□□ 0.31
CPNE1-224ENST00000483359 TRPS1Q9UHF7 1281 aa16.98■□□□□ 0.31
CPNE1-224ENST00000483359 H0YIV9 168 aa16.98■□□□□ 0.31
CPNE1-224ENST00000483359 STMND1H3BQB6 276 aa16.98■□□□□ 0.31
CPNE1-224ENST00000483359 NPHS1O60500 1241 aa16.98■□□□□ 0.31
CPNE1-224ENST00000483359 CRCPO75575 148 aa16.98■□□□□ 0.31
CPNE1-224ENST00000483359 ESRRBO95718 433 aa16.98■□□□□ 0.31
CPNE1-224ENST00000483359 HMOX2P30519 316 aa16.98■□□□□ 0.31
CPNE1-224ENST00000483359 PKNOX1P55347 436 aa16.98■□□□□ 0.31
CPNE1-224ENST00000483359 TIPARPQ7Z3E1 657 aaKnown RBP16.98■□□□□ 0.31
CPNE1-224ENST00000483359 METTL6Q8TCB7 284 aa16.98■□□□□ 0.31
CPNE1-224ENST00000483359 ZNF578Q96N58 590 aaPredicted RBP16.98■□□□□ 0.31
CPNE1-224ENST00000483359 ZNF395Q9H8N7 513 aaPredicted RBP16.98■□□□□ 0.31
CPNE1-224ENST00000483359 SRPK3Q9UPE1 567 aa16.98■□□□□ 0.31
CPNE1-224ENST00000483359 STK38LQ9Y2H1 464 aa16.98■□□□□ 0.31
CPNE1-224ENST00000483359 TXNDC9O14530 226 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 B3GALT4O96024 378 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 TGFB1P01137 390 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 SERPINE1P05121 402 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 IL1RNP18510 177 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 HNRNPH1P31943 449 aaKnown RBP16.97■□□□□ 0.31
CPNE1-224ENST00000483359 NAA20P61599 178 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 HYAL2Q12891 473 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 PWP1Q13610 501 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 TOR1AIP1Q5JTV8 583 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 FRG2Q64ET8 278 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 CLEC6AQ6EIG7 209 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 RHBDD2Q6NTF9 364 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 TMEM214Q6NUQ4 689 aaKnown RBP16.97■□□□□ 0.31
CPNE1-224ENST00000483359 FAM199XQ6PEV8 388 aaPredicted RBP16.97■□□□□ 0.31
CPNE1-224ENST00000483359 PRSS41Q7RTY9 318 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 WDR20Q8TBZ3 569 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 ZNF473Q8WTR7 871 aaKnown RBP16.97■□□□□ 0.31
CPNE1-224ENST00000483359 REPS1Q96D71 796 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 FRG2BQ96QU4 278 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 TMEM121BQ9BXQ6 578 aaPredicted RBP16.97■□□□□ 0.31
CPNE1-224ENST00000483359 AICDAQ9GZX7 198 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 RHBGQ9H310 441 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 KLHL31Q9H511 634 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 CCDC86Q9H6F5 360 aaKnown RBP16.97■□□□□ 0.31
CPNE1-224ENST00000483359 AKIRIN1Q9H9L7 192 aaPredicted RBP16.97■□□□□ 0.31
CPNE1-224ENST00000483359 MED4Q9NPJ6 270 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 MAU2Q9Y6X3 613 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 A0A0G2JN53 185 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 MAGEB17A8MXT2 336 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 C4orf51C9J302 202 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 SAP18O00422 153 aaKnown RBP16.97■□□□□ 0.31
CPNE1-224ENST00000483359 ITM2AO43736 263 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 DLGAP3O95886 979 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 TBX6O95947 436 aaPredicted RBP16.97■□□□□ 0.31
CPNE1-224ENST00000483359 ZNF888P0CJ79 500 aaPredicted RBP16.97■□□□□ 0.31
CPNE1-224ENST00000483359 GCGRP47871 477 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 HTR6P50406 440 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 ARSFP54793 590 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 RAB8AP61006 207 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 IFT88Q13099 833 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 TGIF1Q15583 401 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 MUM1Q2TAK8 710 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 FAM214AQ32MH5 1076 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 OR6Y1Q8NGX8 325 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 NT5CQ8TCD5 201 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.97■□□□□ 0.31
CPNE1-224ENST00000483359 DYDC1Q8WWB3 177 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 TRMOQ9BU70 441 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 SLC6A16Q9GZN6 736 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 DMRT3Q9NQL9 472 aa16.97■□□□□ 0.31
CPNE1-224ENST00000483359 TMEM184BQ9Y519 407 aaPredicted RBP16.97■□□□□ 0.31
CPNE1-224ENST00000483359 A0A0A6YYC8 382 aaPredicted RBP16.96■□□□□ 0.31
CPNE1-224ENST00000483359 A0A1B0GX78 115 aa16.96■□□□□ 0.31
CPNE1-224ENST00000483359 TMEM233B4DJY2 109 aa16.96■□□□□ 0.31
CPNE1-224ENST00000483359 I3L1I5 382 aaPredicted RBP16.96■□□□□ 0.31
CPNE1-224ENST00000483359 CLEC3AO75596 197 aa16.96■□□□□ 0.31
CPNE1-224ENST00000483359 HSPA4LO95757 839 aa16.96■□□□□ 0.31
CPNE1-224ENST00000483359 SERPINA6P08185 405 aa16.96■□□□□ 0.31
CPNE1-224ENST00000483359 SERPINB3P29508 390 aa16.96■□□□□ 0.31
CPNE1-224ENST00000483359 RORAP35398 523 aa16.96■□□□□ 0.31
CPNE1-224ENST00000483359 OR1D4P47884 311 aa16.96■□□□□ 0.31
CPNE1-224ENST00000483359 RPS13P62277 151 aaKnown RBP16.96■□□□□ 0.31
CPNE1-224ENST00000483359 SCIMPQ6UWF3 145 aa16.96■□□□□ 0.31
CPNE1-224ENST00000483359 C6orf15Q6UXA7 325 aaPredicted RBP16.96■□□□□ 0.31
CPNE1-224ENST00000483359 ARHGEF39Q8N4T4 335 aa16.96■□□□□ 0.31
CPNE1-224ENST00000483359 SELENOMQ8WWX9 145 aa16.96■□□□□ 0.31
CPNE1-224ENST00000483359 MR1Q95460 341 aa16.96■□□□□ 0.31
CPNE1-224ENST00000483359 SPRY4Q9C004 299 aa16.96■□□□□ 0.31
CPNE1-224ENST00000483359 B3GNT4Q9C0J1 378 aa16.96■□□□□ 0.31
CPNE1-224ENST00000483359 C20orf27Q9GZN8 174 aa16.96■□□□□ 0.31
CPNE1-224ENST00000483359 OR51B5Q9H339 312 aa16.96■□□□□ 0.31
CPNE1-224ENST00000483359 SNX6Q9UNH7 406 aa16.96■□□□□ 0.31
CPNE1-224ENST00000483359 FER1L5A0AVI2 2057 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 ZNF860A6NHJ4 632 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 MEN1O00255 615 aa16.95■□□□□ 0.3
CPNE1-224ENST00000483359 ERI3O43414 337 aaKnown RBP16.95■□□□□ 0.3
CPNE1-224ENST00000483359 TLX3O43711 291 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms