RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 PAPD4Q6PIY7 484 aaKnown RBP14.37□□□□□ -0.11
LIMS3-203ENST00000480744 KLHL7Q8IXQ5 586 aa14.37□□□□□ -0.11
LIMS3-203ENST00000480744 PDIK1LQ8N165 341 aa14.37□□□□□ -0.11
LIMS3-203ENST00000480744 TBC1D19Q8N5T2 526 aa14.37□□□□□ -0.11
LIMS3-203ENST00000480744 OR5T3Q8NGG3 340 aa14.37□□□□□ -0.11
LIMS3-203ENST00000480744 TSLPQ969D9 159 aa14.37□□□□□ -0.11
LIMS3-203ENST00000480744 MOCOSQ96EN8 888 aa14.37□□□□□ -0.11
LIMS3-203ENST00000480744 SNF8Q96H20 258 aa14.37□□□□□ -0.11
LIMS3-203ENST00000480744 CAPZA3Q96KX2 299 aa14.37□□□□□ -0.11
LIMS3-203ENST00000480744 ZNF354BQ96LW1 612 aa14.37□□□□□ -0.11
LIMS3-203ENST00000480744 ANKRD10Q9NXR5 420 aa14.37□□□□□ -0.11
LIMS3-203ENST00000480744 ABI3Q9P2A4 366 aa14.37□□□□□ -0.11
LIMS3-203ENST00000480744 VWA7Q9Y334 891 aa14.37□□□□□ -0.11
LIMS3-203ENST00000480744 SLC22A7Q9Y694 548 aa14.37□□□□□ -0.11
LIMS3-203ENST00000480744 CREBBPQ92793 2442 aa14.37□□□□□ -0.11
LIMS3-203ENST00000480744 MYO9AB2RTY4 2548 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 TRBC2A0A5B9 178 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 B3GALT4O96024 378 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 MST1P26927 711 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 CSHL1Q14406 222 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 EXT1Q16394 746 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 ZXDCQ2QGD7 858 aaPredicted RBP14.36□□□□□ -0.11
LIMS3-203ENST00000480744 DEFB134Q4QY38 66 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 ZNF766Q5HY98 468 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 CATSPEREQ5SY80 951 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 FAM45BPQ6NSW5 357 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 TRMT10BQ6PF06 316 aaKnown RBP14.36□□□□□ -0.11
LIMS3-203ENST00000480744 TMEM207Q6UWW9 146 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 CRLF3Q8IUI8 442 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 ZNF740Q8NDX6 193 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 ABHD11Q8NFV4 315 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 OR56A3Q8NH54 315 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 DNAJB8Q8NHS0 232 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 FAM45AQ8TCE6 357 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 ATL1Q8WXF7 558 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 SLCO2A1Q92959 643 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 FBXL8Q96CD0 374 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 TSNARE1Q96NA8 513 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 OR4K3Q96R72 315 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 LPAR4Q99677 370 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 OLFM1Q99784 485 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 PLAC1Q9HBJ0 212 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 SEC14L3Q9UDX4 400 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 SH3BGRL2Q9UJC5 107 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 CORO1CQ9ULV4 474 aaPredicted RBP14.36□□□□□ -0.11
LIMS3-203ENST00000480744 DYRK1BQ9Y463 629 aa14.36□□□□□ -0.11
LIMS3-203ENST00000480744 ARHGAP10A1A4S6 786 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 PRSS44E7EML9 344 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 ZNF888P0CJ79 500 aaPredicted RBP14.35□□□□□ -0.11
LIMS3-203ENST00000480744 TCP1P17987 556 aaKnown RBP14.35□□□□□ -0.11
LIMS3-203ENST00000480744 ALOX12P18054 663 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 HNF4AP41235 474 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 OR4D2P58180 307 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 SKP1P63208 163 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 RHAGQ02094 409 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 RGS1Q08116 209 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 TUBA3CQ13748 450 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 MORF4L2Q15014 288 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 MEP1AQ16819 746 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 TUBA3EQ6PEY2 450 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 GALNT7Q86SF2 657 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 ANKMY2Q8IV38 441 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 CYP4X1Q8N118 509 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 M1APQ8TC57 530 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 SLC5A11Q8WWX8 675 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 NEIL2Q969S2 332 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 RELTQ969Z4 430 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 TBC1D20Q96BZ9 403 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 OR1F2PQ96R84 312 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 UTP23Q9BRU9 249 aaKnown RBP14.35□□□□□ -0.11
LIMS3-203ENST00000480744 TRIM51Q9BSJ1 452 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 SPNS1Q9H2V7 528 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 KLHL1Q9NR64 748 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 LANCL2Q9NS86 450 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 COPG2Q9UBF2 871 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 SUCOQ9UBS9 1254 aaKnown RBP14.35□□□□□ -0.11
LIMS3-203ENST00000480744 IKZF3Q9UKT9 509 aa14.35□□□□□ -0.11
LIMS3-203ENST00000480744 NPEPPSL1A6NEC2 478 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 MAGEB17A8MXT2 336 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 FAM227AF5H4B4 570 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 CCL21O00585 134 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 TTI1O43156 1089 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 CHST10O43529 356 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 GALR3O60755 368 aaPredicted RBP14.34□□□□□ -0.11
LIMS3-203ENST00000480744 B4GALT2O60909 372 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 DNAJB6O75190 326 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 FHP07954 510 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 ENO2P09104 434 aaPredicted RBP14.34□□□□□ -0.11
LIMS3-203ENST00000480744 IL10P22301 178 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 JAK1P23458 1154 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 IVDP26440 423 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 ARL4CP56559 192 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 TAS2R50P59544 299 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 DR1Q01658 176 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 OC90Q02509 493 aaPredicted RBP14.34□□□□□ -0.11
LIMS3-203ENST00000480744 RBPJQ06330 500 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 PWP1Q13610 501 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 USP10Q14694 798 aaKnown RBP14.34□□□□□ -0.11
LIMS3-203ENST00000480744 H3F3CQ6NXT2 135 aa14.34□□□□□ -0.11
LIMS3-203ENST00000480744 ABHD13Q7L211 337 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms