RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 PLPP5Q8NEB5 264 aa10.97□□□□□ -0.65
USP11-208ENST00000480104 OR13C4Q8NGS5 318 aa10.97□□□□□ -0.65
USP11-208ENST00000480104 OR2A1Q8NGT9 310 aa10.97□□□□□ -0.65
USP11-208ENST00000480104 CFAP61Q8NHU2 1237 aa10.97□□□□□ -0.65
USP11-208ENST00000480104 RERGQ96A58 199 aaPredicted RBP10.97□□□□□ -0.65
USP11-208ENST00000480104 FAF2Q96CS3 445 aa10.97□□□□□ -0.65
USP11-208ENST00000480104 MARK4Q96L34 752 aa10.97□□□□□ -0.65
USP11-208ENST00000480104 MRGPRX2Q96LB1 330 aa10.97□□□□□ -0.65
USP11-208ENST00000480104 TIGD1Q96MW7 591 aa10.97□□□□□ -0.65
USP11-208ENST00000480104 WFIKKN1Q96NZ8 548 aa10.97□□□□□ -0.65
USP11-208ENST00000480104 FAM173AQ9BQD7 235 aa10.97□□□□□ -0.65
USP11-208ENST00000480104 ANGPTL4Q9BY76 406 aa10.97□□□□□ -0.65
USP11-208ENST00000480104 SLC6A15Q9H2J7 730 aa10.97□□□□□ -0.65
USP11-208ENST00000480104 LANCL2Q9NS86 450 aa10.97□□□□□ -0.65
USP11-208ENST00000480104 ARMCX1Q9P291 453 aa10.97□□□□□ -0.65
USP11-208ENST00000480104 PRSS21Q9Y6M0 314 aa10.97□□□□□ -0.65
USP11-208ENST00000480104 A0A1W2PPV9 198 aa10.96□□□□□ -0.65
USP11-208ENST00000480104 SAGE2PA6NJ88 616 aa10.96□□□□□ -0.65
USP11-208ENST00000480104 A8MVJ9 347 aa10.96□□□□□ -0.65
USP11-208ENST00000480104 AHRRA9YTQ3 701 aa10.96□□□□□ -0.65
USP11-208ENST00000480104 SGK494L7N484 410 aa10.96□□□□□ -0.65
USP11-208ENST00000480104 TMCC2O75069 709 aa10.96□□□□□ -0.65
USP11-208ENST00000480104 ADAM11O75078 769 aa10.96□□□□□ -0.65
USP11-208ENST00000480104 NSA2O95478 260 aaKnown RBP10.96□□□□□ -0.65
USP11-208ENST00000480104 IL18BPO95998 194 aa10.96□□□□□ -0.65
USP11-208ENST00000480104 EPOP01588 193 aa10.96□□□□□ -0.65
USP11-208ENST00000480104 IL1RNP18510 177 aa10.96□□□□□ -0.65
USP11-208ENST00000480104 PTPN3P26045 913 aa10.96□□□□□ -0.65
USP11-208ENST00000480104 NDUFA9Q16795 377 aa10.96□□□□□ -0.65
USP11-208ENST00000480104 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.96□□□□□ -0.65
USP11-208ENST00000480104 PCGF5Q86SE9 256 aa10.96□□□□□ -0.65
USP11-208ENST00000480104 C3orf56Q8N813 242 aa10.96□□□□□ -0.65
USP11-208ENST00000480104 IPMKQ8NFU5 416 aa10.96□□□□□ -0.65
USP11-208ENST00000480104 NTNG2Q96CW9 530 aa10.96□□□□□ -0.65
USP11-208ENST00000480104 OR2A5Q96R48 311 aa10.96□□□□□ -0.65
USP11-208ENST00000480104 ZNF670Q9BS34 389 aa10.96□□□□□ -0.65
USP11-208ENST00000480104 ACAT2Q9BWD1 397 aa10.96□□□□□ -0.65
USP11-208ENST00000480104 SLCO5A1Q9H2Y9 848 aa10.96□□□□□ -0.65
USP11-208ENST00000480104 C12orf65Q9H3J6 166 aaKnown RBP10.96□□□□□ -0.65
USP11-208ENST00000480104 HPF1Q9NWY4 346 aa10.96□□□□□ -0.65
USP11-208ENST00000480104 FBXW2Q9UKT8 454 aa10.96□□□□□ -0.65
USP11-208ENST00000480104 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.96□□□□□ -0.65
USP11-208ENST00000480104 HEATR5AQ86XA9 2040 aa10.96□□□□□ -0.66
USP11-208ENST00000480104 MED12Q93074 2177 aa10.95□□□□□ -0.66
USP11-208ENST00000480104 LRRD1A4D1F6 860 aa10.95□□□□□ -0.66
USP11-208ENST00000480104 UBFD1O14562 309 aaKnown RBP10.95□□□□□ -0.66
USP11-208ENST00000480104 SNPHO15079 494 aa10.95□□□□□ -0.66
USP11-208ENST00000480104 PHF2O75151 1096 aa10.95□□□□□ -0.66
USP11-208ENST00000480104 AP2A2O94973 939 aa10.95□□□□□ -0.66
USP11-208ENST00000480104 OR6B1O95007 311 aa10.95□□□□□ -0.66
USP11-208ENST00000480104 FTH1P02794 183 aa10.95□□□□□ -0.66
USP11-208ENST00000480104 RPN2P04844 631 aa10.95□□□□□ -0.66
USP11-208ENST00000480104 ZNF16P17020 682 aaPredicted RBP10.95□□□□□ -0.66
USP11-208ENST00000480104 ITGA2P17301 1181 aa10.95□□□□□ -0.66
USP11-208ENST00000480104 IGFBP5P24593 272 aa10.95□□□□□ -0.66
USP11-208ENST00000480104 CD68P34810 354 aaPredicted RBP10.95□□□□□ -0.66
USP11-208ENST00000480104 GJC1P36383 396 aa10.95□□□□□ -0.66
USP11-208ENST00000480104 RBMXP38159 391 aaKnown RBP10.95□□□□□ -0.66
USP11-208ENST00000480104 DNASE1L1P49184 302 aa10.95□□□□□ -0.66
USP11-208ENST00000480104 NAA25Q14CX7 972 aa10.95□□□□□ -0.66
USP11-208ENST00000480104 TAF1AQ15573 450 aaPredicted RBP10.95□□□□□ -0.66
USP11-208ENST00000480104 NSUN5P2Q63ZY6 315 aa10.95□□□□□ -0.66
USP11-208ENST00000480104 IL20RBQ6UXL0 311 aa10.95□□□□□ -0.66
USP11-208ENST00000480104 SLC26A11Q86WA9 606 aa10.95□□□□□ -0.66
USP11-208ENST00000480104 VRK3Q8IV63 474 aa10.95□□□□□ -0.66
USP11-208ENST00000480104 NFAM1Q8NET5 270 aaPredicted RBP10.95□□□□□ -0.66
USP11-208ENST00000480104 OXNAD1Q96HP4 312 aaPredicted RBP10.95□□□□□ -0.66
USP11-208ENST00000480104 MED18Q9BUE0 208 aa10.95□□□□□ -0.66
USP11-208ENST00000480104 SH2D2AQ9NP31 389 aa10.95□□□□□ -0.66
USP11-208ENST00000480104 SEMA4BQ9NPR2 832 aaPredicted RBP10.95□□□□□ -0.66
USP11-208ENST00000480104 TUBA8Q9NY65 449 aaPredicted RBP10.95□□□□□ -0.66
USP11-208ENST00000480104 ZNF226Q9NYT6 803 aa10.95□□□□□ -0.66
USP11-208ENST00000480104 IMPACTQ9P2X3 320 aa10.95□□□□□ -0.66
USP11-208ENST00000480104 HEY1Q9Y5J3 304 aa10.95□□□□□ -0.66
USP11-208ENST00000480104 A0A096LNT2 108 aa10.94□□□□□ -0.66
USP11-208ENST00000480104 TRBV5-4A0A0C4DH59 114 aa10.94□□□□□ -0.66
USP11-208ENST00000480104 IGKV1-8A0A0C4DH67 115 aa10.94□□□□□ -0.66
USP11-208ENST00000480104 TXNDC9O14530 226 aa10.94□□□□□ -0.66
USP11-208ENST00000480104 RDH16O75452 317 aa10.94□□□□□ -0.66
USP11-208ENST00000480104 TMIGD3P0DMS9 266 aaPredicted RBP10.94□□□□□ -0.66
USP11-208ENST00000480104 NFKB1P19838 968 aa10.94□□□□□ -0.66
USP11-208ENST00000480104 CNR1P21554 472 aa10.94□□□□□ -0.66
USP11-208ENST00000480104 CMPK1P30085 196 aa10.94□□□□□ -0.66
USP11-208ENST00000480104 CPOXP36551 454 aa10.94□□□□□ -0.66
USP11-208ENST00000480104 BCL6P41182 706 aa10.94□□□□□ -0.66
USP11-208ENST00000480104 TRPC1P48995 793 aa10.94□□□□□ -0.66
USP11-208ENST00000480104 RPS4XP62701 263 aaKnown RBP10.94□□□□□ -0.66
USP11-208ENST00000480104 PLOD1Q02809 727 aaPredicted RBP10.94□□□□□ -0.66
USP11-208ENST00000480104 FOXF2Q12947 444 aa10.94□□□□□ -0.66
USP11-208ENST00000480104 DBN1Q16643 649 aa10.94□□□□□ -0.66
USP11-208ENST00000480104 TPD52L1Q16890 204 aaPredicted RBP10.94□□□□□ -0.66
USP11-208ENST00000480104 GPR33Q49SQ1 333 aa10.94□□□□□ -0.66
USP11-208ENST00000480104 KCTD11Q693B1 232 aa10.94□□□□□ -0.66
USP11-208ENST00000480104 DNM1P46Q6ZS02 220 aa10.94□□□□□ -0.66
USP11-208ENST00000480104 FAM47EQ6ZV65 393 aa10.94□□□□□ -0.66
USP11-208ENST00000480104 TAS2R42Q7RTR8 314 aa10.94□□□□□ -0.66
USP11-208ENST00000480104 GPALPP1Q8IXQ4 340 aa10.94□□□□□ -0.66
USP11-208ENST00000480104 SLC22A15Q8IZD6 547 aa10.94□□□□□ -0.66
USP11-208ENST00000480104 APCDD1LQ8NCL9 501 aa10.94□□□□□ -0.66
USP11-208ENST00000480104 NEIL3Q8TAT5 605 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms