RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 TSPAN12O95859 305 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 LDLRP01130 860 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 CELA2AP08217 269 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 SLC35G6P0C7Q6 338 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 AP1S2P56377 157 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 MINDY4Q4G0A6 757 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 TEDDM1Q5T9Z0 273 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 CAPN13Q6MZZ7 669 aaPredicted RBP13.56□□□□□ -0.24
ATG4B-218ENST00000479554 FAM45BPQ6NSW5 357 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 TMEM214Q6NUQ4 689 aaKnown RBP13.56□□□□□ -0.24
ATG4B-218ENST00000479554 RPUSD3Q6P087 351 aaKnown RBP13.56□□□□□ -0.24
ATG4B-218ENST00000479554 FAM180AQ6UWF9 173 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 TRMT10CQ7L0Y3 403 aaKnown RBP13.56□□□□□ -0.24
ATG4B-218ENST00000479554 ASPGQ86U10 573 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 CCDC25Q86WR0 208 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 GOLGA6L1Q8N7Z2 621 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 CATSPER1Q8NEC5 780 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 OR1N1Q8NGS0 311 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 FAM45AQ8TCE6 357 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 SLC13A3Q8WWT9 602 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 PSMF1Q92530 271 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 LRRC39Q96DD0 335 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 PWWP2AQ96N64 755 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 ZIM3Q96PE6 472 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 HAUS8Q9BT25 410 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 TUBB6Q9BUF5 446 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 TRIM54Q9BYV2 358 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 VN1R1Q9GZP7 353 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 PLAC1Q9HBJ0 212 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 ANKHQ9HCJ1 492 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 TEX15Q9BXT5 2789 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 ICE1Q9Y2F5 2266 aa13.56□□□□□ -0.24
ATG4B-218ENST00000479554 DOPEY1Q5JWR5 2465 aa13.55□□□□□ -0.24
ATG4B-218ENST00000479554 TRAV17A0A0B4J275 112 aa13.55□□□□□ -0.24
ATG4B-218ENST00000479554 SGK494L7N484 410 aa13.55□□□□□ -0.24
ATG4B-218ENST00000479554 E2F3O00716 465 aa13.55□□□□□ -0.24
ATG4B-218ENST00000479554 CYC1P08574 325 aa13.55□□□□□ -0.24
ATG4B-218ENST00000479554 ITGAMP11215 1152 aa13.55□□□□□ -0.24
ATG4B-218ENST00000479554 ICAM2P13598 275 aa13.55□□□□□ -0.24
ATG4B-218ENST00000479554 EDN3P14138 238 aa13.55□□□□□ -0.24
ATG4B-218ENST00000479554 XCR1P46094 333 aa13.55□□□□□ -0.24
ATG4B-218ENST00000479554 EFNA3P52797 238 aa13.55□□□□□ -0.24
ATG4B-218ENST00000479554 ARL4CP56559 192 aa13.55□□□□□ -0.24
ATG4B-218ENST00000479554 STEAP4Q687X5 459 aa13.55□□□□□ -0.24
ATG4B-218ENST00000479554 TRMT10BQ6PF06 316 aaKnown RBP13.55□□□□□ -0.24
ATG4B-218ENST00000479554 SLC26A11Q86WA9 606 aa13.55□□□□□ -0.24
ATG4B-218ENST00000479554 RELL1Q8IUW5 271 aa13.55□□□□□ -0.24
ATG4B-218ENST00000479554 KCT2Q8NC54 265 aa13.55□□□□□ -0.24
ATG4B-218ENST00000479554 OR51Q1Q8NH59 317 aa13.55□□□□□ -0.24
ATG4B-218ENST00000479554 FAR1Q8WVX9 515 aa13.55□□□□□ -0.24
ATG4B-218ENST00000479554 ATL1Q8WXF7 558 aa13.55□□□□□ -0.24
ATG4B-218ENST00000479554 PYCR2Q96C36 320 aa13.55□□□□□ -0.24
ATG4B-218ENST00000479554 TM4SF19Q96DZ7 209 aa13.55□□□□□ -0.24
ATG4B-218ENST00000479554 MAGEB10Q96LZ2 347 aaPredicted RBP13.55□□□□□ -0.24
ATG4B-218ENST00000479554 OLFM1Q99784 485 aa13.55□□□□□ -0.24
ATG4B-218ENST00000479554 WDR83Q9BRX9 315 aaKnown RBP13.55□□□□□ -0.24
ATG4B-218ENST00000479554 PHACTR1Q9C0D0 580 aa13.55□□□□□ -0.24
ATG4B-218ENST00000479554 PLA2G3Q9NZ20 509 aa13.55□□□□□ -0.24
ATG4B-218ENST00000479554 C19orf25Q9UFG5 118 aaPredicted RBP13.55□□□□□ -0.24
ATG4B-218ENST00000479554 VWA7Q9Y334 891 aa13.55□□□□□ -0.24
ATG4B-218ENST00000479554 WIPF3A6NGB9 483 aa13.54□□□□□ -0.24
ATG4B-218ENST00000479554 LCMT2O60294 686 aaKnown RBP13.54□□□□□ -0.24
ATG4B-218ENST00000479554 RDH16O75452 317 aa13.54□□□□□ -0.24
ATG4B-218ENST00000479554 SEC24DO94855 1032 aaPredicted RBP13.54□□□□□ -0.24
ATG4B-218ENST00000479554 ENO2P09104 434 aaPredicted RBP13.54□□□□□ -0.24
ATG4B-218ENST00000479554 NUDT17P0C025 328 aa13.54□□□□□ -0.24
ATG4B-218ENST00000479554 NPPBP16860 134 aa13.54□□□□□ -0.24
ATG4B-218ENST00000479554 TNFSF10P50591 281 aa13.54□□□□□ -0.24
ATG4B-218ENST00000479554 CCR8P51685 355 aa13.54□□□□□ -0.24
ATG4B-218ENST00000479554 PGGT1BP53609 377 aa13.54□□□□□ -0.24
ATG4B-218ENST00000479554 MEF2AQ02078 507 aaPredicted RBP13.54□□□□□ -0.24
ATG4B-218ENST00000479554 INAQ16352 499 aa13.54□□□□□ -0.24
ATG4B-218ENST00000479554 LANCL3Q6ZV70 420 aa13.54□□□□□ -0.24
ATG4B-218ENST00000479554 ANKMY2Q8IV38 441 aa13.54□□□□□ -0.24
ATG4B-218ENST00000479554 TBC1D19Q8N5T2 526 aa13.54□□□□□ -0.24
ATG4B-218ENST00000479554 BCORP1Q8N888 145 aa13.54□□□□□ -0.24
ATG4B-218ENST00000479554 MFSD9Q8NBP5 474 aa13.54□□□□□ -0.24
ATG4B-218ENST00000479554 OR56A3Q8NH54 315 aa13.54□□□□□ -0.24
ATG4B-218ENST00000479554 FBXL8Q96CD0 374 aa13.54□□□□□ -0.24
ATG4B-218ENST00000479554 SH3GL2Q99962 352 aa13.54□□□□□ -0.24
ATG4B-218ENST00000479554 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.54□□□□□ -0.242e-8■□□□□ 9
ATG4B-218ENST00000479554 OLAHQ9NV23 265 aa13.54□□□□□ -0.24
ATG4B-218ENST00000479554 ZFATQ9P243 1243 aa13.54□□□□□ -0.24
ATG4B-218ENST00000479554 TEX264Q9Y6I9 313 aa13.54□□□□□ -0.24
ATG4B-218ENST00000479554 H3BQF6 201 aa13.53□□□□□ -0.24
ATG4B-218ENST00000479554 EIF3HO15372 352 aaKnown RBP eCLIP13.53□□□□□ -0.24
ATG4B-218ENST00000479554 NDUFS4O43181 175 aa13.53□□□□□ -0.24
ATG4B-218ENST00000479554 OR1F1O43749 312 aa13.53□□□□□ -0.24
ATG4B-218ENST00000479554 GUCA1CO95843 209 aa13.53□□□□□ -0.24
ATG4B-218ENST00000479554 F10P00742 488 aa13.53□□□□□ -0.24
ATG4B-218ENST00000479554 AGTR2P50052 363 aa13.53□□□□□ -0.24
ATG4B-218ENST00000479554 FRG1Q14331 258 aaKnown RBP13.53□□□□□ -0.24
ATG4B-218ENST00000479554 ZXDCQ2QGD7 858 aaPredicted RBP13.53□□□□□ -0.24
ATG4B-218ENST00000479554 BTBD16Q32M84 506 aa13.53□□□□□ -0.24
ATG4B-218ENST00000479554 ABHD17BQ5VST6 288 aa13.53□□□□□ -0.24
ATG4B-218ENST00000479554 CRYBG3Q68DQ2 2970 aa13.53□□□□□ -0.24
ATG4B-218ENST00000479554 MAMDC2Q7Z304 686 aaPredicted RBP13.53□□□□□ -0.24
ATG4B-218ENST00000479554 CPEB2Q7Z5Q1 589 aaKnown RBP13.53□□□□□ -0.24
ATG4B-218ENST00000479554 CROCCP2Q86T23 111 aa13.53□□□□□ -0.24
ATG4B-218ENST00000479554 PDSS2Q86YH6 399 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms