RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 SNRPAP09012 282 aaKnown RBP5.98□□□□□ -1.45
SF3B1-209ENST00000479532 HIST1H2AGP0C0S8 130 aaPredicted RBP5.98□□□□□ -1.45
SF3B1-209ENST00000479532 MYZAPP0CAP1 466 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 CEACAM1P13688 526 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 HIST1H2ADP20671 130 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 CYP2A7P20853 494 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 DRD4P21917 467 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 FDXRP22570 491 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 ACP1P24666 158 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 GABRB3P28472 473 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 TYK2P29597 1187 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 ABCG1P45844 678 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 GPR3P46089 330 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 FASLGP48023 281 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 NOVA1P51513 510 aaKnown RBP5.98□□□□□ -1.45
SF3B1-209ENST00000479532 KPNA2P52292 529 aaKnown RBP5.98□□□□□ -1.45
SF3B1-209ENST00000479532 MAZP56270 477 aaKnown RBP5.98□□□□□ -1.45
SF3B1-209ENST00000479532 RAB10P61026 200 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 IRF9Q00978 393 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 E2F1Q01094 437 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 ABRQ12979 859 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 PRKAA1Q13131 559 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 DNAJC3Q13217 504 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 CLCA4Q14CN2 919 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 SPCS2Q15005 226 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 EFTUD2Q15029 972 aaKnown RBP eCLIP5.98□□□□□ -1.45
SF3B1-209ENST00000479532 TRIP6Q15654 476 aaKnown RBP5.98□□□□□ -1.45
SF3B1-209ENST00000479532 RBM20Q5T481 1227 aaKnown RBP5.98□□□□□ -1.45
SF3B1-209ENST00000479532 ARMC6Q6NXE6 501 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 ZNF549Q6P9A3 640 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 FRA10AC1Q70Z53 315 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 ASRGL1Q7L266 308 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 TRPM8Q7Z2W7 1104 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 EFL1Q7Z2Z2 1120 aaKnown RBP5.98□□□□□ -1.45
SF3B1-209ENST00000479532 GLRX5Q86SX6 157 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 PIP4P1Q86T03 277 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 CROCCP3Q8IVE0 287 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 DCUN1D3Q8IWE4 304 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 SLC35F3Q8IY50 421 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 CPNE9Q8IYJ1 553 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 TBC1D21Q8IYX1 336 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 NAGSQ8N159 534 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 ARL14Q8N4G2 192 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 PNPLA1Q8N8W4 532 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 ACVR1CQ8NER5 493 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 DEFB124Q8NES8 71 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 OR10G6Q8NH81 332 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 OR5K2Q8NHB8 316 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 IFI44Q8TCB0 444 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 LKAAEAR1Q8TD35 194 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 CD200R1Q8TD46 325 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 LINGO1Q96FE5 620 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 HIST1H2AHQ96KK5 128 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 ZIM3Q96PE6 472 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 HIST1H2AJQ99878 128 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 DPYSL5Q9BPU6 564 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 CENPKQ9BS16 269 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 H2AFJQ9BTM1 129 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 RAB11FIP5Q9BXF6 653 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 ROPN1BQ9BZX4 212 aaPredicted RBP5.98□□□□□ -1.45
SF3B1-209ENST00000479532 ABCG4Q9H172 646 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 OR52A5Q9H2C5 316 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 SYNDIG1Q9H7V2 258 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 UCK1Q9HA47 277 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 ROPN1Q9HAT0 212 aaPredicted RBP5.98□□□□□ -1.45
SF3B1-209ENST00000479532 C19orf73Q9NVV2 129 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 TDRKHQ9Y2W6 561 aaKnown RBP5.98□□□□□ -1.45
SF3B1-209ENST00000479532 PCDHGA1Q9Y5H4 931 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 CFAP20Q9Y6A4 193 aaKnown RBP5.98□□□□□ -1.45
SF3B1-209ENST00000479532 USP34Q70CQ2 3546 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 OTOGLQ3ZCN5 2332 aa5.98□□□□□ -1.45
SF3B1-209ENST00000479532 ARHGEF17Q96PE2 2063 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-209ENST00000479532 LILRA5A6NI73 299 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 SMIM23A6NLE4 172 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 OR52A4PA6NMU1 304 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 MATN2O00339 956 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 RASGRF2O14827 1237 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 SLC16A5O15375 505 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 DUX1O43812 170 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 CBFA2T3O75081 653 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 CDH16O75309 829 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 PIAS1O75925 651 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 FAM155BO75949 473 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 PRKD3O94806 890 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 EML2O95834 649 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 NUDT17P0C025 328 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 CCDC159P0C7I6 412 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 GIMD1P0DJR0 217 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 BRAFP15056 766 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 PORP16435 677 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-209ENST00000479532 ZNF37AP17032 561 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-209ENST00000479532 AMD1P17707 334 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 PDHA2P29803 388 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 ALDH4A1P30038 563 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 SHMT2P34897 504 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 TRHRP34981 398 aaPredicted RBP5.97□□□□□ -1.45
SF3B1-209ENST00000479532 HSD17B2P37059 387 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 CDKN2DP55273 166 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 TAS2R39P59534 338 aa5.97□□□□□ -1.45
SF3B1-209ENST00000479532 ARPC4P59998 168 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms