RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 SNRNP40Q96DI7 357 aaKnown RBP13.05□□□□□ -0.32
HDAC7-222ENST00000477937 MOCOSQ96EN8 888 aa13.05□□□□□ -0.32
HDAC7-222ENST00000477937 C16orf45Q96MC5 204 aaPredicted RBP13.05□□□□□ -0.32
HDAC7-222ENST00000477937 ZNF700Q9H0M5 742 aa13.05□□□□□ -0.32
HDAC7-222ENST00000477937 LRRC4CQ9HCJ2 640 aa13.05□□□□□ -0.32
HDAC7-222ENST00000477937 HCN3Q9P1Z3 774 aa13.05□□□□□ -0.32
HDAC7-222ENST00000477937 C19orf25Q9UFG5 118 aaPredicted RBP13.05□□□□□ -0.32
HDAC7-222ENST00000477937 CLEC18AA5D8T8 446 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 URADA6NGE7 173 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 NCF1BA6NI72 391 aaPredicted RBP13.04□□□□□ -0.32
HDAC7-222ENST00000477937 NCF1CA8MVU1 366 aaPredicted RBP13.04□□□□□ -0.32
HDAC7-222ENST00000477937 PHGDHO43175 533 aaKnown RBP13.04□□□□□ -0.32
HDAC7-222ENST00000477937 H2AFYO75367 372 aaKnown RBP13.04□□□□□ -0.32
HDAC7-222ENST00000477937 WFS1O76024 890 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 WDR47O94967 919 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 UQCRHP07919 91 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 NCF1P14598 390 aaPredicted RBP13.04□□□□□ -0.32
HDAC7-222ENST00000477937 ALOX12P18054 663 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 GNLYP22749 145 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 GDF5P43026 501 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 UQCRFS1P47985 274 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 ATP6V0D1P61421 351 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 REEP5Q00765 189 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 SLC7A5Q01650 507 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 MFAP5Q13361 173 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 RBBP5Q15291 538 aaKnown RBP13.04□□□□□ -0.32
HDAC7-222ENST00000477937 CDKL4Q5MAI5 379 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 CLEC18BQ6UXF7 455 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 ABHD13Q7L211 337 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 CPEB2Q7Z5Q1 589 aaKnown RBP13.04□□□□□ -0.32
HDAC7-222ENST00000477937 CUZD1Q86UP6 607 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 GPSM1Q86YR5 675 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 TCAIMQ8N3R3 496 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 SPATA6LQ8N4H0 392 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 AFAP1L2Q8N4X5 818 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 PPM1NQ8N819 430 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 CLEC18CQ8NCF0 446 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 BRIX1Q8TDN6 353 aaKnown RBP13.04□□□□□ -0.32
HDAC7-222ENST00000477937 C19orf60Q96EN9 201 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 PEX11GQ96HA9 241 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 OR1F2PQ96R84 312 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 LRRC1Q9BTT6 524 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 TUBB6Q9BUF5 446 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 CAPS2Q9BXY5 557 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 UNKQ9C0B0 810 aaKnown RBP13.04□□□□□ -0.32
HDAC7-222ENST00000477937 SPNS1Q9H2V7 528 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 CNOT10Q9H9A5 744 aaKnown RBP13.04□□□□□ -0.32
HDAC7-222ENST00000477937 CSAG2Q9Y5P2 127 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 COPG1Q9Y678 874 aaKnown RBP13.04□□□□□ -0.32
HDAC7-222ENST00000477937 DOPEY2Q9Y3R5 2298 aa13.04□□□□□ -0.32
HDAC7-222ENST00000477937 DYTNA2CJ06 578 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 ZNF860A6NHJ4 632 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 TCP11X1B4DZS4 312 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 GALR3O60755 368 aaPredicted RBP13.03□□□□□ -0.32
HDAC7-222ENST00000477937 C1QAP02745 245 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 ZNF888P0CJ79 500 aaPredicted RBP13.03□□□□□ -0.32
HDAC7-222ENST00000477937 C1GALT1C1LP0DN25 315 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 CD1DP15813 335 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 SLC6A12P48065 614 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 AGTR2P50052 363 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 EFNA3P52797 238 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 RAB10P61026 200 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 NAB1Q13506 487 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 TLR1Q15399 786 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 ZKSCAN8Q15776 578 aaPredicted RBP13.03□□□□□ -0.32
HDAC7-222ENST00000477937 DEFB134Q4QY38 66 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 SULT1C3Q6IMI6 304 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 KLHDC8AQ8IYD2 350 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 SIRT6Q8N6T7 355 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 ANKRD53Q8N9V6 530 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 FBF1Q8TES7 1133 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 PSMF1Q92530 271 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 CNDP1Q96KN2 507 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 UBXN10Q96LJ8 280 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 IMMP1LQ96LU5 166 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 ASF1BQ9NVP2 202 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 WWOXQ9NZC7 414 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 PTGFRNQ9P2B2 879 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 PCDHGA10Q9Y5H3 936 aa13.03□□□□□ -0.32
HDAC7-222ENST00000477937 ASH1LQ9NR48 2969 aaKnown RBP13.03□□□□□ -0.32
HDAC7-222ENST00000477937 SPENQ96T58 3664 aaKnown RBP13.02□□□□□ -0.32
HDAC7-222ENST00000477937 ESYT3A0FGR9 886 aa13.02□□□□□ -0.33
HDAC7-222ENST00000477937 OR2W5A6NFC9 320 aa13.02□□□□□ -0.33
HDAC7-222ENST00000477937 CLGNO14967 610 aa13.02□□□□□ -0.33
HDAC7-222ENST00000477937 FAM155BO75949 473 aa13.02□□□□□ -0.33
HDAC7-222ENST00000477937 S100BP04271 92 aaPredicted RBP13.02□□□□□ -0.33
HDAC7-222ENST00000477937 SERPINA6P08185 405 aa13.02□□□□□ -0.33
HDAC7-222ENST00000477937 JAK1P23458 1154 aa13.02□□□□□ -0.33
HDAC7-222ENST00000477937 GGT5P36269 586 aa13.02□□□□□ -0.33
HDAC7-222ENST00000477937 GUCY2DQ02846 1103 aa13.02□□□□□ -0.33
HDAC7-222ENST00000477937 SRSF1Q07955 248 aaKnown RBP eCLIP13.02□□□□□ -0.331e-7■□□□□ 10.9
HDAC7-222ENST00000477937 CDC16Q13042 620 aa13.02□□□□□ -0.33
HDAC7-222ENST00000477937 ZNF169Q14929 603 aaPredicted RBP13.02□□□□□ -0.33
HDAC7-222ENST00000477937 SLMAPQ14BN4 828 aa13.02□□□□□ -0.33
HDAC7-222ENST00000477937 NSDHLQ15738 373 aa13.02□□□□□ -0.33
HDAC7-222ENST00000477937 WHAMMP3Q1A5X7 153 aa13.02□□□□□ -0.33
HDAC7-222ENST00000477937 C18orf21Q32NC0 220 aaPredicted RBP13.02□□□□□ -0.33
HDAC7-222ENST00000477937 FHL5Q5TD97 284 aa13.02□□□□□ -0.33
HDAC7-222ENST00000477937 B3GNTL1Q67FW5 361 aaPredicted RBP13.02□□□□□ -0.33
HDAC7-222ENST00000477937 SLCO4C1Q6ZQN7 724 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms