RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 AHCTF1Q8WYP5 2266 aa19■□□□□ 0.63
ACTB-210ENST00000477812 HYKKA2RU49 373 aa18.99■□□□□ 0.63
ACTB-210ENST00000477812 LRIT2A6NDA9 550 aa18.99■□□□□ 0.63
ACTB-210ENST00000477812 FOXE1O00358 373 aaPredicted RBP18.99■□□□□ 0.63
ACTB-210ENST00000477812 MANBAO00462 879 aa18.99■□□□□ 0.63
ACTB-210ENST00000477812 DLGAP3O95886 979 aa18.99■□□□□ 0.63
ACTB-210ENST00000477812 FGF4P08620 206 aa18.99■□□□□ 0.63
ACTB-210ENST00000477812 PCNAP12004 261 aa18.99■□□□□ 0.63
ACTB-210ENST00000477812 SLC5A2P31639 672 aa18.99■□□□□ 0.63
ACTB-210ENST00000477812 HNRNPH1P31943 449 aaKnown RBP18.99■□□□□ 0.63
ACTB-210ENST00000477812 RORAP35398 523 aa18.99■□□□□ 0.63
ACTB-210ENST00000477812 HTR6P50406 440 aa18.99■□□□□ 0.63
ACTB-210ENST00000477812 ATP1A2P50993 1020 aa18.99■□□□□ 0.63
ACTB-210ENST00000477812 NEK2P51955 445 aa18.99■□□□□ 0.63
ACTB-210ENST00000477812 STX3Q13277 289 aa18.99■□□□□ 0.63
ACTB-210ENST00000477812 YOD1Q5VVQ6 348 aaPredicted RBP18.99■□□□□ 0.63
ACTB-210ENST00000477812 KANK2Q63ZY3 851 aa18.99■□□□□ 0.63
ACTB-210ENST00000477812 TMEM126BQ8IUX1 230 aa18.99■□□□□ 0.63
ACTB-210ENST00000477812 RNF175Q8N4F7 328 aa18.99■□□□□ 0.63
ACTB-210ENST00000477812 AFAP1L2Q8N4X5 818 aa18.99■□□□□ 0.63
ACTB-210ENST00000477812 MS4A8Q9BY19 250 aa18.99■□□□□ 0.63
ACTB-210ENST00000477812 MANSC1Q9H8J5 431 aa18.99■□□□□ 0.63
ACTB-210ENST00000477812 EML4Q9HC35 981 aaKnown RBP18.99■□□□□ 0.63
ACTB-210ENST00000477812 FARSBQ9NSD9 589 aaKnown RBP18.99■□□□□ 0.63
ACTB-210ENST00000477812 ADGRE2Q9UHX3 823 aa18.99■□□□□ 0.63
ACTB-210ENST00000477812 PPT2Q9UMR5 302 aa18.99■□□□□ 0.63
ACTB-210ENST00000477812 SRPK3Q9UPE1 567 aa18.99■□□□□ 0.63
ACTB-210ENST00000477812 TMEM184BQ9Y519 407 aaPredicted RBP18.99■□□□□ 0.63
ACTB-210ENST00000477812 TIMM22Q9Y584 194 aa18.99■□□□□ 0.63
ACTB-210ENST00000477812 SDK2Q58EX2 2172 aa18.99■□□□□ 0.63
ACTB-210ENST00000477812 FER1L5A0AVI2 2057 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 ANKDD1BA6NHY2 528 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 MAGEB17A8MXT2 336 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 TMEM233B4DJY2 109 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 C4orf51C9J302 202 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 STK17BO94768 372 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 KIAA0754O94854 1291 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 ITGAXP20702 1163 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 RBMS1P29558 406 aaKnown RBP18.98■□□□□ 0.63
ACTB-210ENST00000477812 SLC1A6P48664 564 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 RGS1Q08116 209 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 COL9A2Q14055 689 aaPredicted RBP18.98■□□□□ 0.63
ACTB-210ENST00000477812 UGT3A2Q3SY77 523 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 TMEM164Q5U3C3 297 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 GARNL3Q5VVW2 1013 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 ZNF385CQ66K41 422 aaPredicted RBP18.98■□□□□ 0.63
ACTB-210ENST00000477812 CLEC6AQ6EIG7 209 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 RHBDD2Q6NTF9 364 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 TRIM42Q8IWZ5 723 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 DTWD1Q8N5C7 304 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 METTL6Q8TCB7 284 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 ZNF75CPQ92670 426 aaPredicted RBP18.98■□□□□ 0.63
ACTB-210ENST00000477812 RNF31Q96EP0 1072 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 LRFN5Q96NI6 719 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 MTERF1Q99551 399 aaKnown RBP18.98■□□□□ 0.63
ACTB-210ENST00000477812 TMEM121BQ9BXQ6 578 aaPredicted RBP18.98■□□□□ 0.63
ACTB-210ENST00000477812 ULBP3Q9BZM4 244 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 KLHL31Q9H511 634 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 ELOVL6Q9H5J4 265 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 ACTR5Q9H9F9 607 aaPredicted RBP18.98■□□□□ 0.63
ACTB-210ENST00000477812 CUTCQ9NTM9 273 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 IRAK4Q9NWZ3 460 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 PSD3Q9NYI0 1048 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 SNX6Q9UNH7 406 aa18.98■□□□□ 0.63
ACTB-210ENST00000477812 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.97■□□□□ 0.63
ACTB-210ENST00000477812 AZIN1O14977 448 aa18.97■□□□□ 0.63
ACTB-210ENST00000477812 CPNE3O75131 537 aaKnown RBP18.97■□□□□ 0.63
ACTB-210ENST00000477812 SNUPNO95149 360 aaKnown RBP18.97■□□□□ 0.63
ACTB-210ENST00000477812 ETHE1O95571 254 aa18.97■□□□□ 0.63
ACTB-210ENST00000477812 PDYNP01213 254 aa18.97■□□□□ 0.63
ACTB-210ENST00000477812 NTRK1P04629 796 aa18.97■□□□□ 0.63
ACTB-210ENST00000477812 SERPIND1P05546 499 aa18.97■□□□□ 0.63
ACTB-210ENST00000477812 SMIM10L1P0DMW3 83 aa18.97■□□□□ 0.63
ACTB-210ENST00000477812 UROSP10746 265 aa18.97■□□□□ 0.63
ACTB-210ENST00000477812 NEFHP12036 1026 aa18.97■□□□□ 0.63
ACTB-210ENST00000477812 OCRLQ01968 901 aa18.97■□□□□ 0.63
ACTB-210ENST00000477812 DDX39BQ13838 428 aaKnown RBP18.97■□□□□ 0.63
ACTB-210ENST00000477812 RNF165Q6ZSG1 346 aa18.97■□□□□ 0.63
ACTB-210ENST00000477812 ARFGAP2Q8N6H7 521 aa18.97■□□□□ 0.63
ACTB-210ENST00000477812 TTC29Q8NA56 475 aaPredicted RBP18.97■□□□□ 0.63
ACTB-210ENST00000477812 CKAP2Q8WWK9 683 aa18.97■□□□□ 0.63
ACTB-210ENST00000477812 GATA6Q92908 595 aa18.97■□□□□ 0.63
ACTB-210ENST00000477812 MS4A6EQ96DS6 147 aa18.97■□□□□ 0.63
ACTB-210ENST00000477812 SMIM10Q96HG1 83 aa18.97■□□□□ 0.63
ACTB-210ENST00000477812 NDC1Q9BTX1 674 aa18.97■□□□□ 0.63
ACTB-210ENST00000477812 NLNQ9BYT8 704 aa18.97■□□□□ 0.63
ACTB-210ENST00000477812 ZDHHC2Q9UIJ5 367 aa18.97■□□□□ 0.63
ACTB-210ENST00000477812 ANGPTL2Q9UKU9 493 aa18.97■□□□□ 0.63
ACTB-210ENST00000477812 SLC22A7Q9Y694 548 aa18.97■□□□□ 0.63
ACTB-210ENST00000477812 ASPMQ8IZT6 3477 aa18.97■□□□□ 0.63
ACTB-210ENST00000477812 SEC16AO15027 2179 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 DSCR3O14972 297 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 FOXS1O43638 330 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 HSPA4LO95757 839 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 KRT6AP02538 564 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 KRT6BP04259 564 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 HMOX2P30519 316 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 KRT6CP48668 564 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 ARSFP54793 590 aa18.96■□□□□ 0.63
ACTB-210ENST00000477812 RPS13P62277 151 aaKnown RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms