RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 CRELD1Q96HD1 420 aa14.12□□□□□ -0.15
HDAC6-220ENST00000477528 ITPAQ9BY32 194 aa14.12□□□□□ -0.15
HDAC6-220ENST00000477528 MAT2BQ9NZL9 334 aa14.12□□□□□ -0.15
HDAC6-220ENST00000477528 FAM86C2PA6NEL3 165 aa14.12□□□□□ -0.15
HDAC6-220ENST00000477528 LSM1O15116 133 aaKnown RBP14.12□□□□□ -0.15
HDAC6-220ENST00000477528 ERI3O43414 337 aaKnown RBP14.12□□□□□ -0.15
HDAC6-220ENST00000477528 NUAK1O60285 661 aa14.12□□□□□ -0.15
HDAC6-220ENST00000477528 NDUFS1P28331 727 aa14.12□□□□□ -0.15
HDAC6-220ENST00000477528 ARRB2P32121 409 aa14.12□□□□□ -0.15
HDAC6-220ENST00000477528 CLCN7P51798 805 aa14.12□□□□□ -0.15
HDAC6-220ENST00000477528 EIF4HQ15056 248 aaKnown RBP14.12□□□□□ -0.15
HDAC6-220ENST00000477528 SYT16Q17RD7 645 aa14.12□□□□□ -0.15
HDAC6-220ENST00000477528 GTDC1Q4AE62 458 aa14.12□□□□□ -0.15
HDAC6-220ENST00000477528 REEP3Q6NUK4 255 aa14.12□□□□□ -0.15
HDAC6-220ENST00000477528 MZT2BQ6NZ67 158 aa14.12□□□□□ -0.15
HDAC6-220ENST00000477528 TMEM173Q86WV6 379 aaPredicted RBP14.12□□□□□ -0.15
HDAC6-220ENST00000477528 AHCYL2Q96HN2 611 aaKnown RBP14.12□□□□□ -0.15
HDAC6-220ENST00000477528 TRIM39Q9HCM9 518 aa14.12□□□□□ -0.15
HDAC6-220ENST00000477528 TVP23BQ9NYZ1 205 aa14.12□□□□□ -0.15
HDAC6-220ENST00000477528 SCAMP1O15126 338 aa14.12□□□□□ -0.15
HDAC6-220ENST00000477528 SCAMP2O15127 329 aaKnown RBP14.12□□□□□ -0.15
HDAC6-220ENST00000477528 IGLV3-27P01718 113 aa14.12□□□□□ -0.15
HDAC6-220ENST00000477528 PRG2P13727 222 aa14.12□□□□□ -0.15
HDAC6-220ENST00000477528 ZNF829Q3KNS6 432 aaPredicted RBP14.12□□□□□ -0.15
HDAC6-220ENST00000477528 FBXO43Q4G163 708 aa14.12□□□□□ -0.15
HDAC6-220ENST00000477528 KLHL35Q6PF15 583 aa14.12□□□□□ -0.15
HDAC6-220ENST00000477528 LILRA2Q8N149 483 aa14.12□□□□□ -0.15
HDAC6-220ENST00000477528 SLC22A18Q96BI1 424 aa14.12□□□□□ -0.15
HDAC6-220ENST00000477528 DOCK5Q9H7D0 1870 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 PAPPA2Q9BXP8 1791 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 TPST2O60704 377 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 NT5EP21589 574 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 CPN2P22792 545 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 GRHL2Q6ISB3 625 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 NEK10Q6ZWH5 1172 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 BIRC8Q96P09 236 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 BHLHE41Q9C0J9 482 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-220ENST00000477528 LMAN2LQ9H0V9 348 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 CARS2Q9HA77 564 aaKnown RBP14.11□□□□□ -0.15
HDAC6-220ENST00000477528 HCN4Q9Y3Q4 1203 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 CAPN5O15484 640 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-220ENST00000477528 UQCRC2P22695 453 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 GDI1P31150 447 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 XKP51811 444 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 COX10Q12887 443 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 TAB1Q15750 504 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 KLHL12Q53G59 568 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 CXorf57Q6NSI4 855 aaKnown RBP14.11□□□□□ -0.15
HDAC6-220ENST00000477528 SETD7Q8WTS6 366 aaKnown RBP14.11□□□□□ -0.15
HDAC6-220ENST00000477528 RFKQ969G6 155 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 TPK1Q9H3S4 243 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 STOX2Q9P2F5 926 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-220ENST00000477528 UTS2RQ9UKP6 389 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 CHST10O43529 356 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 CLPXO76031 633 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 ALPPP05187 535 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 TPP2P29144 1249 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-220ENST00000477528 CCR7P32248 378 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 ZNF776Q68DI1 518 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-220ENST00000477528 TMEM102Q8N9M5 508 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-220ENST00000477528 ZCCHC10Q8TBK6 192 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 TOX2Q96NM4 488 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 ALPK1Q96QP1 1244 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 SLC46A2Q9BY10 475 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 ZSCAN32Q9NX65 697 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 ACSL5Q9ULC5 683 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 DUXAA6NLW8 204 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 ZDHHC11BP0C7U3 371 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 CD9P21926 228 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 KCNC4Q03721 635 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 PEX5LQ8IYB4 626 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 TMEM27Q9HBJ8 222 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 GTF2A1LQ9UNN4 478 aa14.11□□□□□ -0.15
HDAC6-220ENST00000477528 SCN1AP35498 2009 aa14.1□□□□□ -0.15
HDAC6-220ENST00000477528 E7EQ34 232 aa14.1□□□□□ -0.15
HDAC6-220ENST00000477528 TLR4O00206 839 aa14.1□□□□□ -0.15
HDAC6-220ENST00000477528 CCT3P49368 545 aaKnown RBP14.1□□□□□ -0.15
HDAC6-220ENST00000477528 GABARAPL2P60520 117 aa14.1□□□□□ -0.15
HDAC6-220ENST00000477528 DEFB103AP81534 67 aa14.1□□□□□ -0.15
HDAC6-220ENST00000477528 CBLBQ13191 982 aa14.1□□□□□ -0.15
HDAC6-220ENST00000477528 PYDC2Q56P42 97 aa14.1□□□□□ -0.15
HDAC6-220ENST00000477528 RUNDC3AQ59EK9 446 aa14.1□□□□□ -0.15
HDAC6-220ENST00000477528 LAPTM4BQ86VI4 370 aa14.1□□□□□ -0.15
HDAC6-220ENST00000477528 CAMKK1Q8N5S9 505 aa14.1□□□□□ -0.15
HDAC6-220ENST00000477528 AQP11Q8NBQ7 271 aa14.1□□□□□ -0.15
HDAC6-220ENST00000477528 TMEM145Q8NBT3 493 aa14.1□□□□□ -0.15
HDAC6-220ENST00000477528 UBASH3BQ8TF42 649 aa14.1□□□□□ -0.15
HDAC6-220ENST00000477528 PPP1R14BQ96C90 147 aa14.1□□□□□ -0.15
HDAC6-220ENST00000477528 ACPTQ9BZG2 426 aa14.1□□□□□ -0.15
HDAC6-220ENST00000477528 LINC00597Q9H2U6 94 aa14.1□□□□□ -0.15
HDAC6-220ENST00000477528 GORASP2Q9H8Y8 452 aa14.1□□□□□ -0.15
HDAC6-220ENST00000477528 TRNAU1APQ9NX07 287 aaKnown RBP14.1□□□□□ -0.15
HDAC6-220ENST00000477528 B3GALT2O43825 422 aa14.1□□□□□ -0.15
HDAC6-220ENST00000477528 ABLIM3O94929 683 aa14.1□□□□□ -0.15
HDAC6-220ENST00000477528 SLC16A8O95907 504 aa14.1□□□□□ -0.15
HDAC6-220ENST00000477528 TIMP1P01033 207 aa14.1□□□□□ -0.15
HDAC6-220ENST00000477528 TIE1P35590 1138 aa14.1□□□□□ -0.15
HDAC6-220ENST00000477528 RPL4P36578 427 aaKnown RBP14.1□□□□□ -0.15
HDAC6-220ENST00000477528 XKR5Q6UX68 686 aa14.1□□□□□ -0.15
HDAC6-220ENST00000477528 RANBP3LQ86VV4 465 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms