RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	C14orf28	Q4W4Y0	310 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	TAF1B	Q53T94	588 aa	Predicted RBP	4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	TEDDM1	Q5T9Z0	273 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	STEAP4	Q687X5	459 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	WDR93	Q6P2C0	686 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	KLC3	Q6P597	504 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	EMB	Q6PCB8	327 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	WASH2P	Q6VEQ5	465 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	FRA10AC1	Q70Z53	315 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	CCDC91	Q7Z6B0	441 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	GALNT7	Q86SF2	657 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	TBC1D1	Q86TI0	1168 aa	Predicted RBP	4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	OOSP2	Q86WS3	158 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	THNSL2	Q86YJ6	484 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	GALNT15	Q8N3T1	639 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	NKAP	Q8N5F7	415 aa	Known RBP	4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ZBTB2	Q8N680	514 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	CLDN19	Q8N6F1	224 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	PPM1N	Q8N819	430 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	BOLL	Q8N9W6	283 aa	Known RBP	4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ZFPM2	Q8WW38	1151 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	KCNJ9	Q92806	393 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	INPP5D	Q92835	1189 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	CABS1	Q96KC9	395 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	PKNOX2	Q96KN3	472 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	LINC00615	Q96LM1	132 aa	Predicted RBP	4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	APOLD1	Q96LR9	279 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	C12orf66	Q96MD2	445 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	MRI1	Q9BV20	369 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	LRRC61	Q9BV99	259 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	RAB11FIP5	Q9BXF6	653 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ALOXE3	Q9BYJ1	711 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	MVB12B	Q9H7P6	319 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	COG4	Q9H9E3	785 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	IL21R	Q9HBE5	538 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	WASH6P	Q9NQA3	447 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	FBXO6	Q9NRD1	293 aa	Predicted RBP	4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	POT1	Q9NUX5	634 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	IMP3	Q9NV31	184 aa	Known RBP	4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	UTP6	Q9NYH9	597 aa	Known RBP	4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	LRIT1	Q9P2V4	623 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	LNPEP	Q9UIQ6	1025 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SLC39A10	Q9ULF5	831 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ASF1A	Q9Y294	204 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	PRKAB1	Q9Y478	270 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	FANCM	Q8IYD8	2048 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	NUMA1	Q14980	2115 aa		4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SPTBN5	Q9NRC6	3674 aa	Known RBP	4.37	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SDK1	Q7Z5N4	2213 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	IGLV3-16	A0A075B6K0	115 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	TCRBV9S1A1T	A0A576	114 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	C10orf142	B7Z368	130 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	MGST3	O14880	152 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	DUX1	O43812	170 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	OR1I1	O60431	355 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	BANF1	O75531	89 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	HAUS5	O94927	633 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SYF2	O95926	243 aa	Known RBP	4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	CKMT1A	P12532	417 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	STMN1	P16949	149 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	XRCC1	P18887	633 aa	Predicted RBP	4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	GCSH	P23434	173 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SLC6A2	P23975	617 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	CRABP2	P29373	138 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	TYK2	P29597	1187 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ALDH4A1	P30038	563 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	HSD17B2	P37059	387 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	GPR3	P46089	330 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ARCN1	P48444	511 aa	Known RBP	4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	CDKN1C	P49918	316 aa	Predicted RBP	4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SERPINB8	P50452	374 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	CTSC	P53634	463 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SIM1	P81133	766 aa	Predicted RBP	4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	MXRA7	P84157	204 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	BNC1	Q01954	994 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	DMPK	Q09013	629 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	NFE2L1	Q14494	772 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ZNF169	Q14929	603 aa	Predicted RBP	4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	NAA25	Q14CX7	972 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	SMAD1	Q15797	465 aa	Known RBP	4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	CLPP	Q16740	277 aa	Predicted RBP	4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	MUM1	Q2TAK8	710 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	KBTBD12	Q3ZCT8	623 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	IYD	Q6PHW0	289 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ABRAXAS1	Q6UWZ7	409 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ZDHHC24	Q6UX98	284 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	UNC5D	Q6UXZ4	953 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	CCNI2	Q6ZMN8	369 aa	Predicted RBP	4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	NEK10	Q6ZWH5	1172 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	EFL1	Q7Z2Z2	1120 aa	Known RBP	4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	DGLUCY	Q7Z3D6	616 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	LDB1	Q86U70	411 aa	Predicted RBP	4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	PIM3	Q86V86	326 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	DENND6A	Q8IWF6	608 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	CNTN4	Q8IWV2	1026 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	PIANP	Q8IYJ0	282 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	TBC1D21	Q8IYX1	336 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	KRT222	Q8N1A0	295 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	PELI3	Q8N2H9	469 aa		4.36	□□□□□ -1.71
NSMCE4A-208	ENST00000477289	ARL14	Q8N4G2	192 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms