RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 MRPS2Q9Y399 296 aaKnown RBP2.37□□□□□ -2.03
XRN1-211ENST00000477237 FADS3Q9Y5Q0 445 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 CLCA3PQ9Y6N3 262 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 STON1Q9Y6Q2 735 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 COL5A2P05997 1499 aaPredicted RBP2.37□□□□□ -2.03
XRN1-211ENST00000477237 PTPRCP08575 1304 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 FAM205AQ6ZU69 1335 aa2.37□□□□□ -2.03
XRN1-211ENST00000477237 CCNB3Q8WWL7 1395 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 SOGA1O94964 1423 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ARHGAP31Q2M1Z3 1444 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 A0A1B0GVG6 124 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 MACROD2A1Z1Q3 448 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 SLC15A5A6NIM6 579 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 TMEM210A6NLX4 147 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ERVV-1B6SEH8 477 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 SPECC1L-ADORA2AF8WAN1 911 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 TAF4O00268 1085 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 DNM1LO00429 736 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 MAP2K7O14733 419 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ATP2A1O14983 1001 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 OGTO15294 1046 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ARHGEF9O43307 516 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ADAM20O43506 726 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 VEGFDO43915 354 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 MED24O75448 989 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 MYO1DO94832 1006 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 BMP10O95393 424 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 PTBP3O95758 552 aaKnown RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 GAS8O95995 478 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 EIF2S1P05198 315 aaKnown RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 IL6P05231 212 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 TPOP07202 933 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 CRYGCP07315 174 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 CD48P09326 243 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 STAG3L3P0CL85 134 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 PRSS56P0CW18 603 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ERVK-10P10266 1014 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 CLUP10909 449 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ODC1P11926 461 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 CCDC130P13994 396 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 EZRP15311 586 aaKnown RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 ZNF26P17031 533 aaPredicted RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 CD58P19256 250 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 POLR2CP19387 275 aaPredicted RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 ITGAXP20702 1163 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 PSMA2P25787 234 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 NMT1P30419 496 aaKnown RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 CORO1AP31146 461 aaKnown RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 HOXC8P31273 242 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 SERPINF1P36955 418 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 GP5P40197 560 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 MDH1P40925 334 aaKnown RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 CASP3P42574 277 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 CCR10P46092 362 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 PIP4K2AP48426 406 aaPredicted RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 SLC11A1P49279 550 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ACADVLP49748 655 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 NT5C2P49902 561 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ARHGDIAP52565 204 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 SLC7A2P52569 658 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 EFNA5P52803 228 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 NLRP11P59045 1033 aaKnown RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 UBE2HP62256 183 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 XIAPP98170 497 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 MC1RQ01726 317 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 LRMPQ12912 555 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 IL24Q13007 206 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 STK4Q13043 487 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 RCN2Q14257 317 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 NR1D2Q14995 579 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 PDK1Q15118 436 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 PON2Q15165 354 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 KRT31Q15323 416 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 KYAT1Q16773 422 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 GTDC1Q4AE62 458 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 DUSP28Q4G0W2 176 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 SGO1Q5FBB7 561 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 WDR38Q5JTN6 314 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 MAP3K21Q5TCX8 1036 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ANKRD20A3Q5VUR7 823 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 CLEC6AQ6EIG7 209 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 FAM109BQ6ICB4 259 aaPredicted RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 CASC4Q6P4E1 433 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 MSANTD1Q6ZTZ1 278 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ASB18Q6ZVZ8 466 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 SLC24A5Q71RS6 500 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ANO5Q75V66 913 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ARMCX2Q7L311 632 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 TAS2R42Q7RTR8 314 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 SZRD1Q7Z422 152 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 TMCO2Q7Z6W1 182 aaPredicted RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 CLVS1Q8IUQ0 354 aaPredicted RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 FOXRED2Q8IWF2 684 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 CHERPQ8IWX8 916 aaKnown RBP2.36□□□□□ -2.03
XRN1-211ENST00000477237 CCDC36Q8IYA8 594 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 ZNF440Q8IYI8 595 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 KIAA2013Q8IYS2 634 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 SLC38A6Q8IZM9 456 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 SCML4Q8N228 414 aa2.36□□□□□ -2.03
XRN1-211ENST00000477237 NATD1Q8N6N6 113 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms