RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 MBD3L5A6NJ08 208 aaPredicted RBP14.26□□□□□ -0.13
SMG5-204ENST00000476954 A8MUA0 341 aa14.26□□□□□ -0.13
SMG5-204ENST00000476954 HAX1O00165 279 aa14.26□□□□□ -0.13
SMG5-204ENST00000476954 TXNDC9O14530 226 aa14.26□□□□□ -0.13
SMG5-204ENST00000476954 TUBB4AP04350 444 aa14.26□□□□□ -0.13
SMG5-204ENST00000476954 H2AFZP0C0S5 128 aa14.26□□□□□ -0.13
SMG5-204ENST00000476954 EZRP15311 586 aaKnown RBP14.26□□□□□ -0.13
SMG5-204ENST00000476954 RPA3P35244 121 aaPredicted RBP14.26□□□□□ -0.13
SMG5-204ENST00000476954 CCDC38Q502W7 563 aa14.26□□□□□ -0.13
SMG5-204ENST00000476954 ODF2Q5BJF6 829 aa14.26□□□□□ -0.13
SMG5-204ENST00000476954 ICE2Q659A1 982 aa14.26□□□□□ -0.13
SMG5-204ENST00000476954 PODNL1Q6PEZ8 512 aa14.26□□□□□ -0.13
SMG5-204ENST00000476954 PRSS57Q6UWY2 283 aa14.26□□□□□ -0.13
SMG5-204ENST00000476954 H2AFVQ71UI9 128 aa14.26□□□□□ -0.13
SMG5-204ENST00000476954 ADCK2Q7Z695 626 aa14.26□□□□□ -0.13
SMG5-204ENST00000476954 PCGF5Q86SE9 256 aa14.26□□□□□ -0.13
SMG5-204ENST00000476954 LDB1Q86U70 411 aaPredicted RBP14.26□□□□□ -0.13
SMG5-204ENST00000476954 ARMC10Q8N2F6 343 aa14.26□□□□□ -0.13
SMG5-204ENST00000476954 TMEM251Q8N6I4 163 aa14.26□□□□□ -0.13
SMG5-204ENST00000476954 PPFIBP2Q8ND30 876 aa14.26□□□□□ -0.13
SMG5-204ENST00000476954 PSD4Q8NDX1 1056 aa14.26□□□□□ -0.13
SMG5-204ENST00000476954 NFAM1Q8NET5 270 aaPredicted RBP14.26□□□□□ -0.13
SMG5-204ENST00000476954 TNIP2Q8NFZ5 429 aa14.26□□□□□ -0.13
SMG5-204ENST00000476954 TIMMDC1Q9NPL8 285 aa14.26□□□□□ -0.13
SMG5-204ENST00000476954 SPATA7Q9P0W8 599 aa14.26□□□□□ -0.13
SMG5-204ENST00000476954 SPRR3Q9UBC9 169 aa14.26□□□□□ -0.13
SMG5-204ENST00000476954 DRG1Q9Y295 367 aaKnown RBP14.26□□□□□ -0.13
SMG5-204ENST00000476954 DSCAMO60469 2012 aa14.25□□□□□ -0.13
SMG5-204ENST00000476954 ATP6AP2A0A1C7CYW4 349 aa14.25□□□□□ -0.13
SMG5-204ENST00000476954 HACD1B0YJ81 288 aa14.25□□□□□ -0.13
SMG5-204ENST00000476954 H7C0C1 242 aa14.25□□□□□ -0.13
SMG5-204ENST00000476954 ACOT7O00154 380 aa14.25□□□□□ -0.13
SMG5-204ENST00000476954 AQP7O14520 342 aa14.25□□□□□ -0.13
SMG5-204ENST00000476954 PHF1O43189 567 aaPredicted RBP14.25□□□□□ -0.13
SMG5-204ENST00000476954 ITGA10O75578 1167 aa14.25□□□□□ -0.13
SMG5-204ENST00000476954 ATP6AP2O75787 350 aa14.25□□□□□ -0.13
SMG5-204ENST00000476954 GLSO94925 669 aaPredicted RBP14.25□□□□□ -0.13
SMG5-204ENST00000476954 CNOT4O95628 575 aaKnown RBP14.25□□□□□ -0.13
SMG5-204ENST00000476954 SERPING1P05155 500 aa14.25□□□□□ -0.13
SMG5-204ENST00000476954 FREM3P0C091 2139 aa14.25□□□□□ -0.13
SMG5-204ENST00000476954 PKMP14618 531 aaKnown RBP14.25□□□□□ -0.13
SMG5-204ENST00000476954 BMP7P18075 431 aa14.25□□□□□ -0.13
SMG5-204ENST00000476954 ENDOUP21128 410 aaKnown RBP14.25□□□□□ -0.13
SMG5-204ENST00000476954 ATP5OP48047 213 aa14.25□□□□□ -0.13
SMG5-204ENST00000476954 MAN2A2P49641 1150 aa14.25□□□□□ -0.13
SMG5-204ENST00000476954 MPP1Q00013 466 aa14.25□□□□□ -0.13
SMG5-204ENST00000476954 HYAL2Q12891 473 aa14.25□□□□□ -0.13
SMG5-204ENST00000476954 PRPSAP1Q14558 356 aa14.25□□□□□ -0.13
SMG5-204ENST00000476954 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.25□□□□□ -0.13
SMG5-204ENST00000476954 ULK2Q8IYT8 1036 aa14.25□□□□□ -0.13
SMG5-204ENST00000476954 MCOLN3Q8TDD5 553 aa14.25□□□□□ -0.13
SMG5-204ENST00000476954 SREK1Q8WXA9 508 aaKnown RBP14.25□□□□□ -0.13
SMG5-204ENST00000476954 CTNNBL1Q8WYA6 563 aaPredicted RBP14.25□□□□□ -0.13
SMG5-204ENST00000476954 NAP1L5Q96NT1 182 aaPredicted RBP14.25□□□□□ -0.13
SMG5-204ENST00000476954 SLC2A6Q9UGQ3 507 aa14.25□□□□□ -0.13
SMG5-204ENST00000476954 BZW2Q9Y6E2 419 aaKnown RBP14.25□□□□□ -0.13
SMG5-204ENST00000476954 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.25□□□□□ -0.133e-11■■■□□ 17.4
SMG5-204ENST00000476954 TRBV11-1A0A0K0K1C0 115 aa14.24□□□□□ -0.13
SMG5-204ENST00000476954 SAGE2PA6NJ88 616 aa14.24□□□□□ -0.13
SMG5-204ENST00000476954 HSPB2A8KAH6 182 aa14.24□□□□□ -0.13
SMG5-204ENST00000476954 DVL2O14641 736 aa14.24□□□□□ -0.13
SMG5-204ENST00000476954 GOT2P00505 430 aaKnown RBP14.24□□□□□ -0.13
SMG5-204ENST00000476954 ERGP11308 486 aa14.24□□□□□ -0.13
SMG5-204ENST00000476954 PSMA3P25788 255 aa14.24□□□□□ -0.13
SMG5-204ENST00000476954 PRDX1Q06830 199 aaKnown RBP14.24□□□□□ -0.13
SMG5-204ENST00000476954 TMED2Q15363 201 aa14.24□□□□□ -0.13
SMG5-204ENST00000476954 HSPB2Q16082 182 aa14.24□□□□□ -0.13
SMG5-204ENST00000476954 CATSPEREQ5SY80 951 aa14.24□□□□□ -0.13
SMG5-204ENST00000476954 WLSQ5T9L3 541 aa14.24□□□□□ -0.13
SMG5-204ENST00000476954 LRRC38Q5VT99 294 aa14.24□□□□□ -0.13
SMG5-204ENST00000476954 TMEM214Q6NUQ4 689 aaKnown RBP14.24□□□□□ -0.13
SMG5-204ENST00000476954 SLC22A16Q86VW1 577 aa14.24□□□□□ -0.13
SMG5-204ENST00000476954 KCT2Q8NC54 265 aa14.24□□□□□ -0.13
SMG5-204ENST00000476954 SLC35G2Q8TBE7 412 aa14.24□□□□□ -0.13
SMG5-204ENST00000476954 SMPDL3AQ92484 453 aa14.24□□□□□ -0.13
SMG5-204ENST00000476954 SYN2Q92777 582 aaPredicted RBP14.24□□□□□ -0.13
SMG5-204ENST00000476954 LRRC46Q96FV0 321 aa14.24□□□□□ -0.13
SMG5-204ENST00000476954 PIP5K1AQ99755 562 aa14.24□□□□□ -0.13
SMG5-204ENST00000476954 LIN28AQ9H9Z2 209 aaKnown RBP14.24□□□□□ -0.13
SMG5-204ENST00000476954 DDX56Q9NY93 547 aaKnown RBP14.24□□□□□ -0.13
SMG5-204ENST00000476954 FEZ2Q9UHY8 353 aaPredicted RBP14.24□□□□□ -0.13
SMG5-204ENST00000476954 ERVK-11Q9UQG0 969 aa14.24□□□□□ -0.13
SMG5-204ENST00000476954 NAALAD2Q9Y3Q0 740 aa14.24□□□□□ -0.13
SMG5-204ENST00000476954 HEATR5AQ86XA9 2040 aa14.24□□□□□ -0.13
SMG5-204ENST00000476954 hCG_1818297A0A087WSY0 165 aa14.23□□□□□ -0.13
SMG5-204ENST00000476954 MROH6A6NGR9 719 aa14.23□□□□□ -0.13
SMG5-204ENST00000476954 CLDN4O14493 209 aa14.23□□□□□ -0.13
SMG5-204ENST00000476954 B4GALT2O60909 372 aa14.23□□□□□ -0.13
SMG5-204ENST00000476954 AGFG1P52594 562 aaKnown RBP14.23□□□□□ -0.13
SMG5-204ENST00000476954 OLR1P78380 273 aa14.23□□□□□ -0.13
SMG5-204ENST00000476954 BTG2P78543 158 aa14.23□□□□□ -0.13
SMG5-204ENST00000476954 ZNF534Q76KX8 674 aa14.23□□□□□ -0.13
SMG5-204ENST00000476954 FAM109AQ8N4B1 249 aa14.23□□□□□ -0.13
SMG5-204ENST00000476954 MAPK1IP1LQ8NDC0 245 aa14.23□□□□□ -0.13
SMG5-204ENST00000476954 OR13J1Q8NGT2 312 aa14.23□□□□□ -0.13
SMG5-204ENST00000476954 ALS2CR12Q96Q35 445 aa14.23□□□□□ -0.13
SMG5-204ENST00000476954 FAM118BQ9BPY3 351 aa14.23□□□□□ -0.13
SMG5-204ENST00000476954 ANKHQ9HCJ1 492 aa14.23□□□□□ -0.13
SMG5-204ENST00000476954 MTRF1LQ9UGC7 380 aaKnown RBP14.23□□□□□ -0.13
SMG5-204ENST00000476954 LCMT1Q9UIC8 334 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms