RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 PTGR2Q8N8N7 351 aaPredicted RBP9.2□□□□□ -0.94
HDAC3-208ENST00000476739 EXD3Q8N9H8 876 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 OR5T3Q8NGG3 340 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 OR2Y1Q8NGV0 311 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 NT5CQ8TCD5 201 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 FKBP10Q96AY3 582 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 ZBTB9Q96C00 473 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 WDR34Q96EX3 536 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 NSUN5Q96P11 429 aaKnown RBP9.2□□□□□ -0.94
HDAC3-208ENST00000476739 MRPL57Q9BQC6 102 aaKnown RBP9.2□□□□□ -0.94
HDAC3-208ENST00000476739 DRC3Q9H069 523 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 SLC26A1Q9H2B4 701 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 MRPL46Q9H2W6 279 aaKnown RBP9.2□□□□□ -0.94
HDAC3-208ENST00000476739 C12orf65Q9H3J6 166 aaKnown RBP9.2□□□□□ -0.94
HDAC3-208ENST00000476739 COPG2Q9UBF2 871 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 OPTCQ9UBM4 332 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 EMCNQ9ULC0 261 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 KCNMB2Q9Y691 235 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 MED13Q9UHV7 2174 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 CACNA1GO43497 2377 aa9.2□□□□□ -0.94
HDAC3-208ENST00000476739 IGLV3-12A0A075B6K2 115 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 A0A1B0GTL3 188 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 CCDC189A1A4V9 331 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 OR2W5A6NFC9 320 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 ZNF860A6NHJ4 632 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 A8MT66 165 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 ERVH48-1M5A8F1 160 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 PPP6CO00743 305 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 ATXN7O15265 892 aaPredicted RBP9.19□□□□□ -0.94
HDAC3-208ENST00000476739 H2AFYO75367 372 aaKnown RBP9.19□□□□□ -0.94
HDAC3-208ENST00000476739 RDH16O75452 317 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 JRKO75564 520 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 DNAJB5O75953 348 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 NSA2O95478 260 aaKnown RBP9.19□□□□□ -0.94
HDAC3-208ENST00000476739 RECKO95980 971 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 ALBP02768 609 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 PRB1P04280 392 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 ITGB2P05107 769 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 ZGLP1P0C6A0 271 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 SLC35G6P0C7Q6 338 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 ZNF888P0CJ79 500 aaPredicted RBP9.19□□□□□ -0.94
HDAC3-208ENST00000476739 SMIM10L1P0DMW3 83 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 EPB42P16452 691 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 FBLP22087 321 aaKnown RBP9.19□□□□□ -0.94
HDAC3-208ENST00000476739 FOLR3P41439 243 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 CASP2P42575 452 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 GTF2A1P52655 376 aaPredicted RBP9.19□□□□□ -0.94
HDAC3-208ENST00000476739 RAB8AP61006 207 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 OLR1P78380 273 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 IRF8Q02556 426 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 KLC1Q07866 573 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 PWP1Q13610 501 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 ATP1A4Q13733 1029 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 GTF2H2Q13888 395 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 DSG2Q14126 1118 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 SSPNQ14714 243 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 TBCCQ15814 346 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 NDUFA9Q16795 377 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 CPZQ66K79 652 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 GTF2H2CQ6P1K8 395 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 BORAQ6PGQ7 559 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 TMIGD1Q6UXZ0 262 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 GOLGA7Q7Z5G4 137 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 PPP1R32Q7Z5V6 425 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 ZC3H7AQ8IWR0 971 aaKnown RBP9.19□□□□□ -0.94
HDAC3-208ENST00000476739 RNF175Q8N4F7 328 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 AFAP1L2Q8N4X5 818 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 AMER2Q8N7J2 671 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 STT3BQ8TCJ2 826 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 ACMSDQ8TDX5 336 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 UTP15Q8TED0 518 aaKnown RBP9.19□□□□□ -0.94
HDAC3-208ENST00000476739 MVB12AQ96EY5 273 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 PTCD3Q96EY7 689 aaKnown RBP9.19□□□□□ -0.94
HDAC3-208ENST00000476739 SMIM10Q96HG1 83 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 CDK15Q96Q40 435 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 UBL7Q96S82 380 aaPredicted RBP9.19□□□□□ -0.94
HDAC3-208ENST00000476739 YIPF2Q9BWQ6 316 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 CAPS2Q9BXY5 557 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 TRIM55Q9BYV6 548 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 SLC6A16Q9GZN6 736 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 EHD1Q9H4M9 534 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 NT5DC2Q9H857 520 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 ZBTB26Q9HCK0 441 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 HCN3Q9P1Z3 774 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 TRPC4Q9UBN4 977 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 ZNF282Q9UDV7 671 aaPredicted RBP9.19□□□□□ -0.94
HDAC3-208ENST00000476739 POLHQ9Y253 713 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 PADI2Q9Y2J8 665 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 NAALAD2Q9Y3Q0 740 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 SCN2AQ99250 2005 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 ZFYVE26Q68DK2 2539 aa9.19□□□□□ -0.94
HDAC3-208ENST00000476739 ITPR1Q14643 2758 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 A0A0G2JN53 185 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 ARGFXA6NJG6 315 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 H0YIG0 161 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 STX16-NPEPL1H3BU86 382 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 OR7A17O14581 309 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 STX16O14662 325 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 DLX3O60479 287 aa9.18□□□□□ -0.94
HDAC3-208ENST00000476739 GALR3O60755 368 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms