RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 PNLIPRP1P54315 467 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 BROXQ5VW32 411 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 CYP4Z1Q86W10 505 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 DCP2Q8IU60 420 aaKnown RBP15.99■□□□□ 0.15
TVP23B-202ENST00000476139 NAGSQ8N159 534 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 FBXO15Q8NCQ5 510 aaPredicted RBP15.99■□□□□ 0.15
TVP23B-202ENST00000476139 TBC1D15Q8TC07 691 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 CXorf40AQ8TE69 158 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 CIDECQ96AQ7 238 aaPredicted RBP15.99■□□□□ 0.15
TVP23B-202ENST00000476139 CHFRQ96EP1 664 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 SORBS1Q9BX66 1292 aaKnown RBP15.99■□□□□ 0.15
TVP23B-202ENST00000476139 IGFLR1Q9H665 355 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 PLGRKTQ9HBL7 147 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 DYRK1BQ9Y463 629 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 USP34Q70CQ2 3546 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 MYO9BQ13459 2157 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 AXIN1O15169 862 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 HPRP00739 348 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 PCCBP05166 539 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 HBA1P69905 142 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 C6orf141Q5SZD1 244 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 EGFLAMQ63HQ2 1017 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 ANGPTL8Q6UXH0 198 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 HEATR4Q86WZ0 1026 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 SPARTQ8N0X7 666 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 CHDHQ8NE62 594 aaPredicted RBP15.99■□□□□ 0.15
TVP23B-202ENST00000476139 PJA1Q8NG27 643 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 OR13F1Q8NGS4 319 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 TPD52L3Q96J77 140 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 OR52A5Q9H2C5 316 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 GPATCH2Q9NW75 528 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 RAPGEFL1Q9UHV5 662 aa15.99■□□□□ 0.15
TVP23B-202ENST00000476139 HTR1AP08908 422 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 IL1RNP18510 177 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 FCARP24071 287 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 MAGEA2P43356 314 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 MAPK9P45984 424 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 PSMD7P51665 324 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 EIF4HQ15056 248 aaKnown RBP15.98■□□□□ 0.15
TVP23B-202ENST00000476139 LAIR2Q6ISS4 152 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 VITQ6UXI7 678 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 ZNF765Q7L2R6 523 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 MMP21Q8N119 569 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 ARL10Q8N8L6 244 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 SLC5A11Q8WWX8 675 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 COQ8BQ96D53 544 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 LINC00615Q96LM1 132 aaPredicted RBP15.98■□□□□ 0.15
TVP23B-202ENST00000476139 TMEM121BQ9BXQ6 578 aaPredicted RBP15.98■□□□□ 0.15
TVP23B-202ENST00000476139 PLA2G2FQ9BZM2 168 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 DMRT3Q9NQL9 472 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 GPR34Q9UPC5 381 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 GOLGA4Q13439 2230 aaKnown RBP15.98■□□□□ 0.15
TVP23B-202ENST00000476139 C17orf113A0A1B0GUU1 675 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 LOC100130705A0A1B0GUX0 176 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 NOL3O60936 208 aaKnown RBP15.98■□□□□ 0.15
TVP23B-202ENST00000476139 KLK1P06870 262 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 GJA4P35212 333 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 PBX2P40425 430 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 ASMTP46597 345 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 C21orf58P58505 322 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 NFATC3Q12968 1075 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 RGNQ15493 299 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 PRSS53Q2L4Q9 553 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 TMEM52BQ4KMG9 183 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 COX20Q5RI15 118 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 NXPE4Q6UWF7 544 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 OR4A15Q8NGL6 344 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.98■□□□□ 0.15
TVP23B-202ENST00000476139 HSH2DQ96JZ2 352 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 CCDC177Q9NQR7 707 aaPredicted RBP15.98■□□□□ 0.15
TVP23B-202ENST00000476139 USE1Q9NZ43 259 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 PRUNE2Q8WUY3 3088 aa15.98■□□□□ 0.15
TVP23B-202ENST00000476139 CCNA2P20248 432 aa15.97■□□□□ 0.15
TVP23B-202ENST00000476139 PLA2G16P53816 162 aa15.97■□□□□ 0.15
TVP23B-202ENST00000476139 FOXD4Q12950 439 aaPredicted RBP15.97■□□□□ 0.15
TVP23B-202ENST00000476139 MPEG1Q2M385 716 aa15.97■□□□□ 0.15
TVP23B-202ENST00000476139 PIP5KL1Q5T9C9 394 aa15.97■□□□□ 0.15
TVP23B-202ENST00000476139 TTC23Q5W5X9 447 aa15.97■□□□□ 0.15
TVP23B-202ENST00000476139 GALNT18Q6P9A2 607 aa15.97■□□□□ 0.15
TVP23B-202ENST00000476139 LAS2Q8IYD9 372 aa15.97■□□□□ 0.15
TVP23B-202ENST00000476139 VPS37AQ8NEZ2 397 aa15.97■□□□□ 0.15
TVP23B-202ENST00000476139 ZFP90Q8TF47 636 aa15.97■□□□□ 0.15
TVP23B-202ENST00000476139 DPEP2Q9H4A9 486 aa15.97■□□□□ 0.15
TVP23B-202ENST00000476139 DOCK9Q9BZ29 2069 aa15.97■□□□□ 0.15
TVP23B-202ENST00000476139 INMTO95050 263 aa15.97■□□□□ 0.15
TVP23B-202ENST00000476139 DRD3P35462 400 aa15.97■□□□□ 0.15
TVP23B-202ENST00000476139 IL5RAQ01344 420 aa15.97■□□□□ 0.15
TVP23B-202ENST00000476139 OR2T5Q6IEZ7 315 aa15.97■□□□□ 0.15
TVP23B-202ENST00000476139 PNCKQ6P2M8 343 aa15.97■□□□□ 0.15
TVP23B-202ENST00000476139 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.97■□□□□ 0.15
TVP23B-202ENST00000476139 SYNPOQ8N3V7 929 aa15.97■□□□□ 0.15
TVP23B-202ENST00000476139 OR2T29Q8NH02 315 aa15.97■□□□□ 0.15
TVP23B-202ENST00000476139 FNDC8Q8TC99 324 aa15.97■□□□□ 0.15
TVP23B-202ENST00000476139 TFGQ92734 400 aaPredicted RBP15.97■□□□□ 0.15
TVP23B-202ENST00000476139 METTL2AQ96IZ6 378 aaKnown RBP15.97■□□□□ 0.15
TVP23B-202ENST00000476139 ZNF514Q96K75 400 aaPredicted RBP15.97■□□□□ 0.15
TVP23B-202ENST00000476139 PAK1IP1Q9NWT1 392 aaPredicted RBP15.97■□□□□ 0.15
TVP23B-202ENST00000476139 SERGEFQ9UGK8 458 aa15.97■□□□□ 0.15
TVP23B-202ENST00000476139 OR1A2Q9Y585 309 aa15.97■□□□□ 0.15
TVP23B-202ENST00000476139 ABCB7O75027 752 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms