RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 CD6P30203 668 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 LCN1P31025 176 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 FOXN2P32314 431 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 ARR3P36575 388 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 RFC3P40938 356 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 DPP6P42658 865 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 IDH3GP51553 393 aaPredicted RBP3.73□□□□□ -1.81
LSM2-211ENST00000475835 NR0B1P51843 470 aaKnown RBP3.73□□□□□ -1.81
LSM2-211ENST00000475835 KPNA2P52292 529 aaKnown RBP3.73□□□□□ -1.81
LSM2-211ENST00000475835 LIMK2P53671 638 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 EMP2P54851 167 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 AQP4P55087 323 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 MAZP56270 477 aaKnown RBP3.73□□□□□ -1.81
LSM2-211ENST00000475835 RAB25P57735 213 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 RGS8P57771 180 aaPredicted RBP3.73□□□□□ -1.81
LSM2-211ENST00000475835 HERVK_113P63132 956 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 ERVK-25P63136 954 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 MRPS11P82912 194 aaKnown RBP3.73□□□□□ -1.81
LSM2-211ENST00000475835 VLDLRP98155 873 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 MBTD1Q05BQ5 628 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 PPP3CAQ08209 521 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 EPS8Q12929 822 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 BIKQ13323 160 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 BTN1A1Q13410 526 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 AQP6Q13520 282 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 GANABQ14697 944 aaKnown RBP3.73□□□□□ -1.81
LSM2-211ENST00000475835 GRM7Q14831 915 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 ACOX1Q15067 660 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 P2RY14Q15391 338 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 CHRNA2Q15822 529 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 SNAPC1Q16533 368 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 HAGHQ16775 308 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 EXOC3L4Q17RC7 722 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 MICAQ29983 383 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 HFEQ30201 348 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 RFX4Q33E94 735 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 SLC10A6Q3KNW5 377 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 PTPN20Q4JDL3 420 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 TIGD5Q53EQ6 642 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 FAXCQ5TGI0 409 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 NKAIN2Q5VXU1 208 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 TDRD10Q5VZ19 366 aaKnown RBP3.73□□□□□ -1.81
LSM2-211ENST00000475835 IZUMO3Q5VZ72 239 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 ARL6IP4Q66PJ3 421 aaKnown RBP3.73□□□□□ -1.81
LSM2-211ENST00000475835 KRT80Q6KB66 452 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 RGS7BPQ6MZT1 257 aaPredicted RBP3.73□□□□□ -1.81
LSM2-211ENST00000475835 FBXO42Q6P3S6 717 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 MTFR2Q6P444 385 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 PSRC1Q6PGN9 363 aaPredicted RBP3.73□□□□□ -1.81
LSM2-211ENST00000475835 B3GNT9Q6UX72 402 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 MFSD7Q6UXD7 560 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 CD300LGQ6UXG3 332 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 RAD9BQ6WBX8 426 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 SPNS3Q6ZMD2 512 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 TMEM26Q6ZUK4 368 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 DENND5BQ6ZUT9 1274 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 THAP5Q7Z6K1 395 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 IRF2BP1Q8IU81 584 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 NUTM2AQ8IVF1 878 aaPredicted RBP3.73□□□□□ -1.81
LSM2-211ENST00000475835 ZBTB8OSQ8IWT0 167 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 C8orf59Q8N0T1 100 aaPredicted RBP3.73□□□□□ -1.81
LSM2-211ENST00000475835 LGI2Q8N0V4 545 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 PPM1KQ8N3J5 372 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 C12orf45Q8N5I9 185 aaPredicted RBP3.73□□□□□ -1.81
LSM2-211ENST00000475835 ATPAF2Q8N5M1 289 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 GDPD1Q8N9F7 314 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 NETO2Q8NC67 525 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 BEND2Q8NDZ0 799 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 FAM83FQ8NEG4 500 aaPredicted RBP3.73□□□□□ -1.81
LSM2-211ENST00000475835 FAM46DQ8NEK8 389 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 SEMA6DQ8NFY4 1073 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 OR4M2Q8NGB6 313 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 OR10T2Q8NGX3 314 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 OR51A7Q8NH64 312 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 NEK7Q8TDX7 302 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 SNX33Q8WV41 574 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 HAS2Q92819 552 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 RPL3LQ92901 407 aaKnown RBP3.73□□□□□ -1.81
LSM2-211ENST00000475835 PPP1R14AQ96A00 147 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 MRGPRFQ96AM1 343 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 KIAA1143Q96AT1 154 aaPredicted RBP3.73□□□□□ -1.81
LSM2-211ENST00000475835 ELMO3Q96BJ8 720 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 FOXRED1Q96CU9 486 aaPredicted RBP3.73□□□□□ -1.81
LSM2-211ENST00000475835 MRPL38Q96DV4 380 aaKnown RBP3.73□□□□□ -1.81
LSM2-211ENST00000475835 SIPA1Q96FS4 1042 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 SENP5Q96HI0 755 aaPredicted RBP3.73□□□□□ -1.81
LSM2-211ENST00000475835 SH3YL1Q96HL8 342 aaPredicted RBP3.73□□□□□ -1.81
LSM2-211ENST00000475835 SLC41A2Q96JW4 573 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 HBEGFQ99075 208 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 SMOQ99835 787 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 MGME1Q9BQP7 344 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 SH2D3AQ9BRG2 576 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 C11orf70Q9BRQ4 267 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 GGACTQ9BVM4 153 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 TPPP3Q9BW30 176 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 DDA1Q9BW61 102 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 ERVK-6Q9BXR3 956 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 CADM1Q9BY67 442 aaKnown RBP3.73□□□□□ -1.81
LSM2-211ENST00000475835 MFRPQ9BY79 579 aa3.73□□□□□ -1.81
LSM2-211ENST00000475835 SDCBP2Q9H190 292 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms