RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 KCNJ11Q14654 390 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 CILP2Q8IUL8 1156 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 RAB2BQ8WUD1 216 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 RAB8BQ92930 207 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 TRIM43Q96BQ3 446 aaPredicted RBP10.63□□□□□ -0.71
VAPB-204ENST00000475243 RC3H2Q9HBD1 1191 aaKnown RBP10.63□□□□□ -0.71
VAPB-204ENST00000475243 HPF1Q9NWY4 346 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 SLIT3O75094 1523 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 CNTRLQ7Z7A1 2325 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 H7BY64 318 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 RNF13O43567 381 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 KAT7O95251 611 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 APLP1P51693 650 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 CCDC80Q76M96 950 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 C14orf80Q86SX3 495 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 GLIS1Q8NBF1 620 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 GALNT11Q8NCW6 608 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 OR9A1PQ8NGU1 263 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 SLC35B2Q8TB61 432 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 DOK4Q8TEW6 326 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 TMEM125Q96AQ2 219 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 PRAP1Q96NZ9 151 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 Q9N2J8 555 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 AASSQ9UDR5 926 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 FBXL3Q9UKT7 428 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 A0A1W2PQ45 241 aaPredicted RBP10.63□□□□□ -0.71
VAPB-204ENST00000475243 A0A1W2PQY0 241 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 AGTRAPQ6RW13 159 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 TICAM1Q8IUC6 712 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 SHDQ96IW2 340 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 OR8D2Q9GZM6 311 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 SLC7A8Q9UHI5 535 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 LAMP5Q9UJQ1 280 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 PCDHGA10Q9Y5H3 936 aa10.63□□□□□ -0.71
VAPB-204ENST00000475243 HEXBP07686 556 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 CBSLP0DN79 551 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 CBSP35520 551 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 GKN2Q86XP6 184 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 PHTF2Q8N3S3 785 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 OR5T2Q8NGG2 359 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 OR6N1Q8NGY5 312 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 ZDHHC18Q9NUE0 388 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 DNAJC27Q9NZQ0 273 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 DNAJB4Q9UDY4 337 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 SRRDQ9UH36 339 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 INSL5Q9Y5Q6 135 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 C3P01024 1663 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 HMGN1P05114 100 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 MRPL3P09001 348 aaKnown RBP10.62□□□□□ -0.71
VAPB-204ENST00000475243 GP1BBP13224 206 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 OR2B6P58173 313 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 VSX2P58304 361 aaPredicted RBP10.62□□□□□ -0.71
VAPB-204ENST00000475243 SPANXN4Q5MJ08 99 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 CWF19L1Q69YN2 538 aaKnown RBP10.62□□□□□ -0.71
VAPB-204ENST00000475243 SLC39A4Q6P5W5 647 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 DNM1P34Q6PK57 102 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 SSX6Q7RTT6 188 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 TMEM17Q86X19 198 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 OR8K3Q8NH51 312 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 FCGR1BQ92637 280 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 HSPBAP1Q96EW2 488 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 ALPK1Q96QP1 1244 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 IL21RQ9HBE5 538 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 POFUT2Q9Y2G5 429 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 SPEF2Q9C093 1822 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 A0A1W2PPL8 197 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 CDC40O60508 579 aaKnown RBP eCLIP10.62□□□□□ -0.71
VAPB-204ENST00000475243 CREG1O75629 220 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 MLLT6P55198 1093 aaPredicted RBP10.62□□□□□ -0.71
VAPB-204ENST00000475243 ARPC4P59998 168 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 OCLNQ16625 522 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 SLC15A3Q8IY34 581 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 SMPDL3AQ92484 453 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 FAXDC2Q96IV6 333 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 XKR8Q9H6D3 395 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 GRHPRQ9UBQ7 328 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 DKKL1Q9UK85 242 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 PLCL2Q9UPR0 1127 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 OR6C70A6NIJ9 312 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 PLD2O14939 933 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 CDRT1O95170 752 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 AGR2O95994 175 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 MSX1P28360 303 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 EIF2S3P41091 472 aaKnown RBP10.62□□□□□ -0.71
VAPB-204ENST00000475243 STK19P49842 368 aaPredicted RBP10.62□□□□□ -0.71
VAPB-204ENST00000475243 S100A10P60903 97 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 RPS3AP61247 264 aaKnown RBP10.62□□□□□ -0.71
VAPB-204ENST00000475243 DEFA5Q01523 94 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 CCINQ13939 588 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 WSCD2Q2TBF2 565 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 C22orf39Q6P5X5 142 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 TTLL10Q6ZVT0 673 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 OR8S1Q8NH09 359 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 UCK2Q9BZX2 261 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 FAM159BA6NKW6 160 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 XPNPEP2O43895 674 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 VNN2O95498 520 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 VAMP1P23763 118 aa10.62□□□□□ -0.71
VAPB-204ENST00000475243 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.62□□□□□ -0.714e-6■■□□□ 13.8
VAPB-204ENST00000475243 ZBTB8BQ8NAP8 495 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms