RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 FBXO42Q6P3S6 717 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 PRR23BQ6ZRT6 265 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 GK5Q6ZS86 529 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 RABEPKQ7Z6M1 372 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 RETREG3Q86VR2 466 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 SFTPA2Q8IWL1 248 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 TRIM48Q8IWZ4 208 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.33□□□□□ -1.48e-6■■■■■ 46.4
ATG4A-207ENST00000474825 DSELQ8IZU8 1212 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 PGAM4Q8N0Y7 254 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 CARFQ8N187 725 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 ARHGAP24Q8N264 748 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 RNF175Q8N4F7 328 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 MINDY1Q8N5J2 469 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 POU5F2Q8N7G0 328 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 KYQ8NBH2 561 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 MFSD9Q8NBP5 474 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 TRPV3Q8NET8 790 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 DNAJB8Q8NHS0 232 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 CEP76Q8TAP6 659 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 BAHD1Q8TBE0 780 aaPredicted RBP6.33□□□□□ -1.4
ATG4A-207ENST00000474825 NT5CQ8TCD5 201 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 LMX1AQ8TE12 382 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 ROPN1LQ96C74 230 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 MTFMTQ96DP5 389 aaKnown RBP6.33□□□□□ -1.4
ATG4A-207ENST00000474825 TM4SF19Q96DZ7 209 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 SPDL1Q96EA4 605 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 SMIM10Q96HG1 83 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 LOXL4Q96JB6 756 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 MTERF1Q99551 399 aaKnown RBP6.33□□□□□ -1.4
ATG4A-207ENST00000474825 DPH7Q9BTV6 452 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 ACAT2Q9BWD1 397 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.33□□□□□ -1.4
ATG4A-207ENST00000474825 EPB41L1Q9H4G0 881 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 LHX9Q9NQ69 397 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 NDE1Q9NXR1 346 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 ACTR10Q9NZ32 417 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 CCDC167Q9P0B6 97 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 ADAM29Q9UKF5 820 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 POMT2Q9UKY4 750 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 PRPF19Q9UMS4 504 aaKnown RBP6.33□□□□□ -1.4
ATG4A-207ENST00000474825 G3BP2Q9UN86 482 aaKnown RBP6.33□□□□□ -1.4
ATG4A-207ENST00000474825 MAPRE3Q9UPY8 281 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 MAN2B2Q9Y2E5 1009 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 SNX11Q9Y5W9 270 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 GMEB1Q9Y692 573 aa6.33□□□□□ -1.4
ATG4A-207ENST00000474825 PTPRZ1P23471 2315 aaPredicted RBP6.33□□□□□ -1.4
ATG4A-207ENST00000474825 PIEZO1Q92508 2521 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 TRBV23OR9-2A0A075B6M9 112 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 A0A0J9YY10 115 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 OR6C74A6NCV1 312 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 LRIT2A6NDA9 550 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 ANKDD1BA6NHY2 528 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 FXYD1O00168 92 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 HAT1O14929 419 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 NUDT21O43809 227 aaKnown RBP6.32□□□□□ -1.4
ATG4A-207ENST00000474825 SCN2BO60939 215 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 SCELO95171 688 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 ANXA6P08133 673 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 EZRP15311 586 aaKnown RBP6.32□□□□□ -1.4
ATG4A-207ENST00000474825 PNLIPP16233 465 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 HOXB9P17482 250 aaPredicted RBP6.32□□□□□ -1.4
ATG4A-207ENST00000474825 PRPS1L1P21108 318 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 TACR1P25103 407 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 EPHA8P29322 1005 aaPredicted RBP6.32□□□□□ -1.4
ATG4A-207ENST00000474825 TIA1P31483 386 aaKnown RBP eCLIP6.32□□□□□ -1.4
ATG4A-207ENST00000474825 BSGP35613 385 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 GRK3P35626 688 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 BCL6P41182 706 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 ASMTP46597 345 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 CPA2P48052 419 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 LSSP48449 732 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 DHPSP49366 369 aaPredicted RBP6.32□□□□□ -1.4
ATG4A-207ENST00000474825 CLNS1AP54105 237 aaKnown RBP6.32□□□□□ -1.4
ATG4A-207ENST00000474825 MTTPP55157 894 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 RPS15AP62244 130 aaKnown RBP6.32□□□□□ -1.4
ATG4A-207ENST00000474825 TRA2BP62995 288 aaKnown RBP6.32□□□□□ -1.4
ATG4A-207ENST00000474825 SLC25A3Q00325 362 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 MEF2AQ02078 507 aaPredicted RBP6.32□□□□□ -1.4
ATG4A-207ENST00000474825 ACSM2AQ08AH3 577 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 PWP1Q13610 501 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 PDE7AQ13946 482 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 PTGR1Q14914 329 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 RPS6KA2Q15349 733 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 DUOXA1Q1HG43 343 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 DPY19L1Q2PZI1 675 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 MANEAQ5SRI9 462 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 ACSM2BQ68CK6 577 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 REP15Q6BDI9 236 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 FCRL6Q6DN72 434 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 MRM1Q6IN84 353 aaKnown RBP6.32□□□□□ -1.4
ATG4A-207ENST00000474825 KLHL35Q6PF15 583 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 SLC23A3Q6PIS1 610 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 ZC3H14Q6PJT7 736 aaKnown RBP6.32□□□□□ -1.4
ATG4A-207ENST00000474825 SPESP1Q6UW49 350 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 C16orf89Q6UX73 402 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 DLEU7Q6UYE1 221 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 IKBIPQ70UQ0 350 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 RNF44Q7L0R7 432 aa6.32□□□□□ -1.4
ATG4A-207ENST00000474825 COMMD6Q7Z4G1 85 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms