RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 ANKRD7Q92527 254 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 PCBD2Q9H0N5 130 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 RIC8BQ9NVN3 520 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 MKL2Q9ULH7 1088 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 PCDHGA10Q9Y5H3 936 aa14.36□□□□□ -0.11
VARS-223ENST00000474643 H7BY64 318 aa14.35□□□□□ -0.11
VARS-223ENST00000474643 PCDH17O14917 1159 aa14.35□□□□□ -0.11
VARS-223ENST00000474643 S100BP04271 92 aaPredicted RBP14.35□□□□□ -0.11
VARS-223ENST00000474643 MYBL2P10244 700 aa14.35□□□□□ -0.11
VARS-223ENST00000474643 HRH2P25021 359 aa14.35□□□□□ -0.11
VARS-223ENST00000474643 MSH2P43246 934 aa14.35□□□□□ -0.11
VARS-223ENST00000474643 ATP6V0D1P61421 351 aa14.35□□□□□ -0.11
VARS-223ENST00000474643 RPS15AP62244 130 aaKnown RBP14.35□□□□□ -0.11
VARS-223ENST00000474643 MINDY4Q4G0A6 757 aa14.35□□□□□ -0.11
VARS-223ENST00000474643 CRB2Q5IJ48 1285 aa14.35□□□□□ -0.11
VARS-223ENST00000474643 UBAP2Q5T6F2 1119 aaKnown RBP14.35□□□□□ -0.11
VARS-223ENST00000474643 B3GNTL1Q67FW5 361 aaPredicted RBP14.35□□□□□ -0.11
VARS-223ENST00000474643 C17orf64Q86WR6 236 aa14.35□□□□□ -0.11
VARS-223ENST00000474643 PLD3Q8IV08 490 aa14.35□□□□□ -0.11
VARS-223ENST00000474643 MREGQ8N565 214 aa14.35□□□□□ -0.11
VARS-223ENST00000474643 SUN3Q8TAQ9 357 aa14.35□□□□□ -0.11
VARS-223ENST00000474643 PRAP1Q96NZ9 151 aa14.35□□□□□ -0.11
VARS-223ENST00000474643 DERL2Q9GZP9 239 aa14.35□□□□□ -0.11
VARS-223ENST00000474643 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.35□□□□□ -0.11
VARS-223ENST00000474643 PTGFRNQ9P2B2 879 aa14.35□□□□□ -0.11
VARS-223ENST00000474643 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.35□□□□□ -0.116e-8■■□□□ 11.5
VARS-223ENST00000474643 IKZF3Q9UKT9 509 aa14.35□□□□□ -0.11
VARS-223ENST00000474643 SLC5A6Q9Y289 635 aa14.35□□□□□ -0.11
VARS-223ENST00000474643 OARD1Q9Y530 152 aa14.35□□□□□ -0.11
VARS-223ENST00000474643 V9GYY5 206 aaPredicted RBP14.35□□□□□ -0.11
VARS-223ENST00000474643 NUP210LQ5VU65 1888 aa14.35□□□□□ -0.11
VARS-223ENST00000474643 ESPL1Q14674 2120 aa14.35□□□□□ -0.11
VARS-223ENST00000474643 USP9YO00507 2555 aaPredicted RBP14.34□□□□□ -0.11
VARS-223ENST00000474643 IGKV1-8A0A0C4DH67 115 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 EXOC1LA0A1B0GW35 172 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 NCF1BA6NI72 391 aaPredicted RBP14.34□□□□□ -0.11
VARS-223ENST00000474643 NCF1CA8MVU1 366 aaPredicted RBP14.34□□□□□ -0.11
VARS-223ENST00000474643 MED26O95402 600 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 CBX6O95503 412 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 STATHP02808 62 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 NCF1P14598 390 aaPredicted RBP14.34□□□□□ -0.11
VARS-223ENST00000474643 TYK2P29597 1187 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 SERPINB8P50452 374 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 SERPINB9P50453 376 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 MFAP5Q13361 173 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 ZNF425Q6IV72 752 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 SBSNQ6UWP8 590 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 GPSM1Q86YR5 675 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 TBC1D19Q8N5T2 526 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 SIRT6Q8N6T7 355 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 OR1N1Q8NGS0 311 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 EXT2Q93063 718 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 PYCR2Q96C36 320 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 FBXL8Q96CD0 374 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 PAFAH2Q99487 392 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 HAUS8Q9BT25 410 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 PPCSQ9HAB8 311 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 ANKHQ9HCJ1 492 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 ENAMQ9NRM1 1142 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 TMEM184CQ9NVA4 438 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 C19orf25Q9UFG5 118 aaPredicted RBP14.34□□□□□ -0.11
VARS-223ENST00000474643 FETUBQ9UGM5 382 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 TEKT2Q9UIF3 430 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 RNF112Q9ULX5 631 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 ACOT9Q9Y305 439 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 DYRK1BQ9Y463 629 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 CSAG2Q9Y5P2 127 aa14.34□□□□□ -0.11
VARS-223ENST00000474643 USP9XQ93008 2570 aaPredicted RBP14.34□□□□□ -0.11
VARS-223ENST00000474643 SPTAN1Q13813 2472 aaKnown RBP14.34□□□□□ -0.11
VARS-223ENST00000474643 UTP20O75691 2785 aaKnown RBP14.33□□□□□ -0.12
VARS-223ENST00000474643 A0A087X1B8 175 aa14.33□□□□□ -0.12
VARS-223ENST00000474643 KRT38O76015 456 aa14.33□□□□□ -0.12
VARS-223ENST00000474643 LTA4HP09960 611 aaKnown RBP14.33□□□□□ -0.12
VARS-223ENST00000474643 FAM153BP0C7A2 387 aa14.33□□□□□ -0.12
VARS-223ENST00000474643 SLC35G6P0C7Q6 338 aa14.33□□□□□ -0.12
VARS-223ENST00000474643 PRR35P0CG20 571 aa14.33□□□□□ -0.12
VARS-223ENST00000474643 C8orf89P0DMQ9 161 aa14.33□□□□□ -0.12
VARS-223ENST00000474643 ICAM2P13598 275 aa14.33□□□□□ -0.12
VARS-223ENST00000474643 CD1DP15813 335 aa14.33□□□□□ -0.12
VARS-223ENST00000474643 SLC26A3P40879 764 aa14.33□□□□□ -0.12
VARS-223ENST00000474643 TSFMP43897 325 aaKnown RBP14.33□□□□□ -0.12
VARS-223ENST00000474643 PER3P56645 1201 aa14.33□□□□□ -0.12
VARS-223ENST00000474643 ZKSCAN8Q15776 578 aaPredicted RBP14.33□□□□□ -0.12
VARS-223ENST00000474643 FAM153CQ494X1 144 aa14.33□□□□□ -0.12
VARS-223ENST00000474643 LCTLQ6UWM7 567 aa14.33□□□□□ -0.12
VARS-223ENST00000474643 LRRC56Q8IYG6 542 aaPredicted RBP14.33□□□□□ -0.12
VARS-223ENST00000474643 CAMKVQ8NCB2 501 aa14.33□□□□□ -0.12
VARS-223ENST00000474643 OR9A4Q8NGU2 314 aa14.33□□□□□ -0.12
VARS-223ENST00000474643 ZCCHC10Q8TBK6 192 aa14.33□□□□□ -0.12
VARS-223ENST00000474643 BRIX1Q8TDN6 353 aaKnown RBP14.33□□□□□ -0.12
VARS-223ENST00000474643 GRHL3Q8TE85 626 aa14.33□□□□□ -0.12
VARS-223ENST00000474643 SLC44A1Q8WWI5 657 aa14.33□□□□□ -0.12
VARS-223ENST00000474643 PKNOX2Q96KN3 472 aa14.33□□□□□ -0.12
VARS-223ENST00000474643 OR2A5Q96R48 311 aa14.33□□□□□ -0.12
VARS-223ENST00000474643 LMF1Q96S06 567 aa14.33□□□□□ -0.12
VARS-223ENST00000474643 VPS11Q9H270 941 aa14.33□□□□□ -0.12
VARS-223ENST00000474643 NMRAL1Q9HBL8 299 aa14.33□□□□□ -0.12
VARS-223ENST00000474643 SNX15Q9NRS6 342 aa14.33□□□□□ -0.12
VARS-223ENST00000474643 WWOXQ9NZC7 414 aa14.33□□□□□ -0.12
VARS-223ENST00000474643 CD274Q9NZQ7 290 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms