RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 AFAP1L2Q8N4X5 818 aa16.96■□□□□ 0.31
UPF3A-203ENST00000474056 TBC1D19Q8N5T2 526 aa16.96■□□□□ 0.31
UPF3A-203ENST00000474056 EFCAB3Q8N7B9 438 aa16.96■□□□□ 0.31
UPF3A-203ENST00000474056 NOA1Q8NC60 698 aaKnown RBP16.96■□□□□ 0.31
UPF3A-203ENST00000474056 TM9SF4Q92544 642 aa16.96■□□□□ 0.31
UPF3A-203ENST00000474056 AGAP4Q96P64 663 aa16.96■□□□□ 0.31
UPF3A-203ENST00000474056 DMGDHQ9UI17 866 aaKnown RBP16.96■□□□□ 0.31
UPF3A-203ENST00000474056 B3GNT3Q9Y2A9 372 aa16.96■□□□□ 0.31
UPF3A-203ENST00000474056 KCNE2Q9Y6J6 123 aa16.96■□□□□ 0.31
UPF3A-203ENST00000474056 SVILO95425 2214 aa16.96■□□□□ 0.3
UPF3A-203ENST00000474056 LOC102723996A0A087X1L8 192 aa16.95■□□□□ 0.3
UPF3A-203ENST00000474056 OR2W5A6NFC9 320 aa16.95■□□□□ 0.3
UPF3A-203ENST00000474056 TAPBPO15533 448 aa16.95■□□□□ 0.3
UPF3A-203ENST00000474056 CELA2AP08217 269 aa16.95■□□□□ 0.3
UPF3A-203ENST00000474056 AHRP35869 848 aa16.95■□□□□ 0.3
UPF3A-203ENST00000474056 UQCRFS1P47985 274 aa16.95■□□□□ 0.3
UPF3A-203ENST00000474056 ATP6V0D1P61421 351 aa16.95■□□□□ 0.3
UPF3A-203ENST00000474056 DLG1Q12959 904 aa16.95■□□□□ 0.3
UPF3A-203ENST00000474056 NAB1Q13506 487 aa16.95■□□□□ 0.3
UPF3A-203ENST00000474056 HERC3Q15034 1050 aa16.95■□□□□ 0.3
UPF3A-203ENST00000474056 RBBP5Q15291 538 aaKnown RBP16.95■□□□□ 0.3
UPF3A-203ENST00000474056 MINDY4Q4G0A6 757 aa16.95■□□□□ 0.3
UPF3A-203ENST00000474056 IGFL2Q6UWQ7 119 aa16.95■□□□□ 0.3
UPF3A-203ENST00000474056 LANCL3Q6ZV70 420 aa16.95■□□□□ 0.3
UPF3A-203ENST00000474056 ZADH2Q8N4Q0 377 aa16.95■□□□□ 0.3
UPF3A-203ENST00000474056 MMGT1Q8N4V1 131 aa16.95■□□□□ 0.3
UPF3A-203ENST00000474056 OR5T3Q8NGG3 340 aa16.95■□□□□ 0.3
UPF3A-203ENST00000474056 NT5CQ8TCD5 201 aa16.95■□□□□ 0.3
UPF3A-203ENST00000474056 ESAMQ96AP7 390 aa16.95■□□□□ 0.3
UPF3A-203ENST00000474056 UBXN10Q96LJ8 280 aa16.95■□□□□ 0.3
UPF3A-203ENST00000474056 AIF1LQ9BQI0 150 aa16.95■□□□□ 0.3
UPF3A-203ENST00000474056 RBCK1Q9BYM8 510 aa16.95■□□□□ 0.3
UPF3A-203ENST00000474056 WWOXQ9NZC7 414 aa16.95■□□□□ 0.3
UPF3A-203ENST00000474056 FLNBO75369 2602 aaKnown RBP16.95■□□□□ 0.3
UPF3A-203ENST00000474056 PCDH17O14917 1159 aa16.94■□□□□ 0.3
UPF3A-203ENST00000474056 GALR3O60755 368 aaPredicted RBP16.94■□□□□ 0.3
UPF3A-203ENST00000474056 PRR35P0CG20 571 aa16.94■□□□□ 0.3
UPF3A-203ENST00000474056 ZNF888P0CJ79 500 aaPredicted RBP16.94■□□□□ 0.3
UPF3A-203ENST00000474056 SLC35E2BP0CK96 405 aa16.94■□□□□ 0.3
UPF3A-203ENST00000474056 C8orf89P0DMQ9 161 aa16.94■□□□□ 0.3
UPF3A-203ENST00000474056 ALOX12P18054 663 aa16.94■□□□□ 0.3
UPF3A-203ENST00000474056 RGS1Q08116 209 aa16.94■□□□□ 0.3
UPF3A-203ENST00000474056 HYAL2Q12891 473 aa16.94■□□□□ 0.3
UPF3A-203ENST00000474056 CDC16Q13042 620 aa16.94■□□□□ 0.3
UPF3A-203ENST00000474056 Q6ZS92 163 aa16.94■□□□□ 0.3
UPF3A-203ENST00000474056 ATCAYQ86WG3 371 aa16.94■□□□□ 0.3
UPF3A-203ENST00000474056 GPSM1Q86YR5 675 aa16.94■□□□□ 0.3
UPF3A-203ENST00000474056 KBTBD2Q8IY47 623 aa16.94■□□□□ 0.3
UPF3A-203ENST00000474056 BRIX1Q8TDN6 353 aaKnown RBP16.94■□□□□ 0.3
UPF3A-203ENST00000474056 PPP4R1Q8TF05 950 aa16.94■□□□□ 0.3
UPF3A-203ENST00000474056 EXT2Q93063 718 aa16.94■□□□□ 0.3
UPF3A-203ENST00000474056 KIAA1191Q96A73 305 aa16.94■□□□□ 0.3
UPF3A-203ENST00000474056 PEX11GQ96HA9 241 aa16.94■□□□□ 0.3
UPF3A-203ENST00000474056 ILKAPQ9H0C8 392 aaPredicted RBP16.94■□□□□ 0.3
UPF3A-203ENST00000474056 ZNF700Q9H0M5 742 aa16.94■□□□□ 0.3
UPF3A-203ENST00000474056 RIC8BQ9NVN3 520 aa16.94■□□□□ 0.3
UPF3A-203ENST00000474056 ZGRF1Q86YA3 2104 aa16.94■□□□□ 0.3
UPF3A-203ENST00000474056 PTPN13Q12923 2485 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 IGHV3-20A0A0C4DH32 117 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 C4orf51C9J302 202 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 DNAJB6O75190 326 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 VPS4BO75351 444 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 CDC123O75794 336 aaPredicted RBP16.93■□□□□ 0.3
UPF3A-203ENST00000474056 C1GALT1C1LP0DN25 315 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 GNAZP19086 355 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 HNF4AP41235 474 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 KCNC1P48547 511 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 HSPA7P48741 367 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 OLR1P78380 273 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 BMPR2Q13873 1038 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 DEFB134Q4QY38 66 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 SLCO4C1Q6ZQN7 724 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 LINC00696Q6ZRV3 163 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 RAPH1Q70E73 1250 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 CUZD1Q86UP6 607 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.93■□□□□ 0.3
UPF3A-203ENST00000474056 IQCKQ8N0W5 287 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 TCAIMQ8N3R3 496 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 SIRT6Q8N6T7 355 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 PDPRQ8NCN5 879 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 UTP15Q8TED0 518 aaKnown RBP16.93■□□□□ 0.3
UPF3A-203ENST00000474056 CREB3L4Q8TEY5 395 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 METTL21AQ8WXB1 218 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 PSMF1Q92530 271 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 MRRFQ96E11 262 aaKnown RBP16.93■□□□□ 0.3
UPF3A-203ENST00000474056 C19orf60Q96EN9 201 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 CYTH2Q99418 400 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 WDR77Q9BQA1 342 aaPredicted RBP16.93■□□□□ 0.3
UPF3A-203ENST00000474056 SLC6A16Q9GZN6 736 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 AICDAQ9GZX7 198 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 EPS8L2Q9H6S3 715 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 ALG9Q9H6U8 611 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 NINJ2Q9NZG7 142 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 MAP10Q9P2G4 905 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 VPS4AQ9UN37 437 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 HIVEP3Q5T1R4 2406 aa16.93■□□□□ 0.3
UPF3A-203ENST00000474056 ASH1LQ9NR48 2969 aaKnown RBP16.93■□□□□ 0.3
UPF3A-203ENST00000474056 FLNCQ14315 2725 aa16.92■□□□□ 0.3
UPF3A-203ENST00000474056 PRAMEF4O60810 478 aa16.92■□□□□ 0.3
UPF3A-203ENST00000474056 ITGAMP11215 1152 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms